Literature DB >> 36131173

Left ventricle analysis in echocardiographic images using transfer learning.

Hafida Belfilali1, Frédéric Bousefsaf2, Mahammed Messadi3.   

Abstract

The segmentation of cardiac boundaries, specifically Left Ventricle (LV) segmentation in 2D echocardiographic images, is a critical step in LV segmentation and cardiac function assessment. These images are generally of poor quality and present low contrast, making daily clinical delineation difficult, time-consuming, and often inaccurate. Thus, it is necessary to design an intelligent automatic endocardium segmentation system. The present work aims to examine and assess the performance of some deep learning-based architectures such as U-Net1, U-Net2, LinkNet, Attention U-Net, and TransUNet using the public CAMUS (Cardiac Acquisitions for Multi-structure Ultrasound Segmentation) dataset. The adopted approach emphasizes the advantage of using transfer learning and resorting to pre-trained backbones in the encoder part of a segmentation network for echocardiographic image analysis. The experimental findings indicated that the proposed framework with the [Formula: see text]-[Formula: see text] is quite promising; it outperforms other more recent approaches with a Dice similarity coefficient of 93.30% and a Hausdorff Distance of 4.01 mm. In addition, a good agreement between the clinical indices calculated from the automatic segmentation and those calculated from the ground truth segmentation. For instance, the mean absolute errors for the left ventricular end-diastolic volume, end-systolic volume, and ejection fraction are equal to 7.9 ml, 5.4 ml, and 6.6%, respectively. These results are encouraging and point out additional perspectives for further improvement.
© 2022. Australasian College of Physical Scientists and Engineers in Medicine.

Entities:  

Keywords:  Deep learning; Echocardiography; Endocardium; Transfer learning

Year:  2022        PMID: 36131173     DOI: 10.1007/s13246-022-01179-3

Source DB:  PubMed          Journal:  Phys Eng Sci Med        ISSN: 2662-4729


  16 in total

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Authors:  Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2003-06       Impact factor: 10.048

2.  Detection of the whole myocardium in 2D-echocardiography for multiple orientations using a geometrically constrained level-set.

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Journal:  Med Image Anal       Date:  2011-10-31       Impact factor: 8.545

3.  The segmentation of the left ventricle of the heart from ultrasound data using deep learning architectures and derivative-based search methods.

Authors:  Gustavo Carneiro; Jacinto C Nascimento; António Freitas
Journal:  IEEE Trans Image Process       Date:  2011-09-23       Impact factor: 10.856

Review 4.  Ultrasound image segmentation: a survey.

Authors:  J Alison Noble; Djamal Boukerroui
Journal:  IEEE Trans Med Imaging       Date:  2006-08       Impact factor: 10.048

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Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

6.  Deep Learning for Segmentation Using an Open Large-Scale Dataset in 2D Echocardiography.

Authors:  Sarah Leclerc; Erik Smistad; Joao Pedrosa; Andreas Ostvik; Frederic Cervenansky; Florian Espinosa; Torvald Espeland; Erik Andreas Rye Berg; Pierre-Marc Jodoin; Thomas Grenier; Carole Lartizien; Jan Dhooge; Lasse Lovstakken; Olivier Bernard
Journal:  IEEE Trans Med Imaging       Date:  2019-02-22       Impact factor: 10.048

7.  MV-RAN: Multiview recurrent aggregation network for echocardiographic sequences segmentation and full cardiac cycle analysis.

Authors:  Ming Li; Chengjia Wang; Heye Zhang; Guang Yang
Journal:  Comput Biol Med       Date:  2020-03-24       Impact factor: 4.589

8.  Cardiac point-of-care to cart-based ultrasound translation using constrained CycleGAN.

Authors:  Mohammad H Jafari; Hany Girgis; Nathan Van Woudenberg; Nathaniel Moulson; Christina Luong; Andrea Fung; Shane Balthazaar; John Jue; Micheal Tsang; Parvathy Nair; Ken Gin; Robert Rohling; Purang Abolmaesumi; Teresa Tsang
Journal:  Int J Comput Assist Radiol Surg       Date:  2020-04-20       Impact factor: 2.924

9.  Automatic segmentation of echocardiographic sequences by active appearance motion models.

Authors:  Johan G Bosch; Steven C Mitchell; Boudewijn P F Lelieveldt; Francisca Nijland; Otto Kamp; Milan Sonka; Johan H C Reiber
Journal:  IEEE Trans Med Imaging       Date:  2002-11       Impact factor: 10.048

Review 10.  Cardiovascular disease as a leading cause of death: how are pharmacists getting involved?

Authors:  Kevin Mc Namara; Hamzah Alzubaidi; John Keith Jackson
Journal:  Integr Pharm Res Pract       Date:  2019-02-04
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