Literature DB >> 36129276

Draft Genome Sequences of Bacillus velezensis Strains AF_3B and OS2, Bacillus amyloliquefaciens Strain BS9, Bacillus halotolerans Strain A1, and Bacillus sp. Strain BS3, Producing Biosurfactants with Antimicrobial Potential.

Syeda Amna Farooq1,2, Anne de Jong2, Shazia Khaliq1, Oscar P Kuipers2.   

Abstract

Five environmental Bacillus strains were sequenced, of which three were isolated from the rhizosphere of agricultural soil and one each from Attock Oil Refinery and Khewra Salt Mine in Pakistan. The strains can be used for plant growth promotion and biosurfactant activity brought about by secondary metabolites.

Entities:  

Year:  2022        PMID： 36129276      PMCID： PMC9584202          DOI： 10.1128/mra.00482-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  12 in total

1.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

2.  Surfactin, a crystalline peptidelipid surfactant produced by Bacillus subtilis: isolation, characterization and its inhibition of fibrin clot formation.

Authors:  K Arima; A Kakinuma; G Tamura
Journal:  Biochem Biophys Res Commun       Date:  1968-05-10       Impact factor: 3.575

Review 3.  Biological control of plant pathogens by Bacillus species.

Authors:  Djordje Fira; Ivica Dimkić; Tanja Berić; Jelena Lozo; Slaviša Stanković
Journal:  J Biotechnol       Date:  2018-08-30       Impact factor: 3.307

Review 4.  Biological activity of lipopeptides from Bacillus.

Authors:  Haobin Zhao; Dongyan Shao; Chunmei Jiang; Junling Shi; Qi Li; Qingsheng Huang; Muhammad Shahid Riaz Rajoka; Hui Yang; Mingliang Jin
Journal:  Appl Microbiol Biotechnol       Date:  2017-07-06       Impact factor: 4.813

Review 5.  Bacillus subtilis antibiotics: structures, syntheses and specific functions.

Authors:  Torsten Stein
Journal:  Mol Microbiol       Date:  2005-05       Impact factor: 3.501

6.  Enhancement of Surfactin yield by improving the medium composition and fermentation process.

Authors:  Judit Willenbacher; Wladimir Yeremchuk; Teresa Mohr; Christoph Syldatk; Rudolf Hausmann
Journal:  AMB Express       Date:  2015-08-22       Impact factor: 3.298

7.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

8.  The Surfactin-Like Lipopeptides From Bacillus spp.: Natural Biodiversity and Synthetic Biology for a Broader Application Range.

Authors:  Ariane Théatre; Carolina Cano-Prieto; Marco Bartolini; Yoann Laurin; Magali Deleu; Joachim Niehren; Tarik Fida; Saïcha Gerbinet; Mohammad Alanjary; Marnix H Medema; Angélique Léonard; Laurence Lins; Ana Arabolaza; Hugo Gramajo; Harald Gross; Philippe Jacques
Journal:  Front Bioeng Biotechnol       Date:  2021-03-02

9.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

10.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971
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