Literature DB >> 36129274

Complete Genome Sequence of Mycobacteriophage IgnatiusPatJac.

Olivia Jacobs1, Nikki Gentle2, Christopher Ealand1, Bavesh Kana1.   

Abstract

IgnatiusPatJac is a Siphoviridae mycobacteriophage capable of lytic infection in Mycobacterium smegmatis and Mycobacterium tuberculosis. It was isolated from damp soil in Johannesburg, South Africa. The 51,164-bp double-stranded DNA genome has a GC content of 63.6%, predicted to encode 93 genes. IgnatiusPatJac is classified as an A1 subcluster mycobacteriophage.

Entities:  

Year:  2022        PMID： 36129274      PMCID： PMC9584200          DOI： 10.1128/mra.00664-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  14 in total

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2.  Consed: a graphical editor for next-generation sequencing.

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4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

5.  Isolation and characterization of bacteriophages from India, with lytic activity against Mycobacterium tuberculosis.

Authors:  Urmi Bajpai; Abhishek Kumar Mehta; Kandasamy Eniyan; Avni Sinha; Ankita Ray; Simran Virdi; Shazeb Ahmad; Aridni Shah; Deepanksha Arora; Devyani Marwaha; Gunjan Chauhan; Prarthna Saraswat; Punita Bathla; Ruchi Singh
Journal:  Can J Microbiol       Date:  2018-03-15       Impact factor: 2.419

6.  Phamerator: a bioinformatic tool for comparative bacteriophage genomics.

Authors:  Steven G Cresawn; Matt Bogel; Nathan Day; Deborah Jacobs-Sera; Roger W Hendrix; Graham F Hatfull
Journal:  BMC Bioinformatics       Date:  2011-10-12       Impact factor: 3.169

7.  Microbial gene identification using interpolated Markov models.

Authors:  S L Salzberg; A L Delcher; S Kasif; O White
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

8.  The HHpred interactive server for protein homology detection and structure prediction.

Authors:  Johannes Söding; Andreas Biegert; Andrei N Lupas
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

9.  Phage therapy as a renewed therapeutic approach to mycobacterial infections: a comprehensive review.

Authors:  Taher Azimi; Mehrdad Mosadegh; Mohammad Javad Nasiri; Sahar Sabour; Samira Karimaei; Ahmad Nasser
Journal:  Infect Drug Resist       Date:  2019-09-17       Impact factor: 4.003

10.  Potent antibody-mediated neutralization limits bacteriophage treatment of a pulmonary Mycobacterium abscessus infection.

Authors:  Rebekah M Dedrick; Krista G Freeman; Jan A Nguyen; Asli Bahadirli-Talbott; Bailey E Smith; Andrew E Wu; Aaron S Ong; Cheng Ting Lin; Lisa C Ruppel; Nicole M Parrish; Graham F Hatfull; Keira A Cohen
Journal:  Nat Med       Date:  2021-07-08       Impact factor: 53.440
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