Literature DB >> 36127477

Three-dimensional genome organization in immune cell fate and function.

Sergi Cuartero1,2, Grégoire Stik3,4, Ralph Stadhouders5,6.   

Abstract

Immune cell development and activation demand the precise and coordinated control of transcriptional programmes. Three-dimensional (3D) organization of the genome has emerged as an important regulator of chromatin state, transcriptional activity and cell identity by facilitating or impeding long-range genomic interactions among regulatory elements and genes. Chromatin folding thus enables cell type-specific and stimulus-specific transcriptional responses to extracellular signals, which are essential for the control of immune cell fate, for inflammatory responses and for generating a diverse repertoire of antigen receptor specificities. Here, we review recent findings connecting 3D genome organization to the control of immune cell differentiation and function, and discuss how alterations in genome folding may lead to immune dysfunction and malignancy.
© 2022. Springer Nature Limited.

Entities:  

Year:  2022        PMID: 36127477     DOI: 10.1038/s41577-022-00774-5

Source DB:  PubMed          Journal:  Nat Rev Immunol        ISSN: 1474-1733            Impact factor:   108.555


  185 in total

Review 1.  Transcriptional control of inflammatory responses.

Authors:  Stephen T Smale; Gioacchino Natoli
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-09-11       Impact factor: 10.005

Review 2.  Developmental enhancers and chromosome topology.

Authors:  Eileen E M Furlong; Michael Levine
Journal:  Science       Date:  2018-09-28       Impact factor: 47.728

Review 3.  The relationship between genome structure and function.

Authors:  A Marieke Oudelaar; Douglas R Higgs
Journal:  Nat Rev Genet       Date:  2020-11-24       Impact factor: 53.242

Review 4.  Transcription factors as readers and effectors of DNA methylation.

Authors:  Heng Zhu; Guohua Wang; Jiang Qian
Journal:  Nat Rev Genet       Date:  2016-08-01       Impact factor: 53.242

Review 5.  Dynamic regulation of transcriptional states by chromatin and transcription factors.

Authors:  Ty C Voss; Gordon L Hager
Journal:  Nat Rev Genet       Date:  2013-12-17       Impact factor: 53.242

Review 6.  The science and medicine of human immunology.

Authors:  Bali Pulendran; Mark M Davis
Journal:  Science       Date:  2020-09-25       Impact factor: 47.728

Review 7.  Transcription factors and 3D genome conformation in cell-fate decisions.

Authors:  Ralph Stadhouders; Guillaume J Filion; Thomas Graf
Journal:  Nature       Date:  2019-05-15       Impact factor: 49.962

Review 8.  Transcriptional Regulation by (Super)Enhancers: From Discovery to Mechanisms.

Authors:  Frank Grosveld; Jente van Staalduinen; Ralph Stadhouders
Journal:  Annu Rev Genomics Hum Genet       Date:  2021-05-05       Impact factor: 8.929

Review 9.  The immune system.

Authors:  Lindsay B Nicholson
Journal:  Essays Biochem       Date:  2016-10-31       Impact factor: 8.000

Review 10.  How transcription factors drive choice of the T cell fate.

Authors:  Hiroyuki Hosokawa; Ellen V Rothenberg
Journal:  Nat Rev Immunol       Date:  2020-09-11       Impact factor: 53.106

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