Literature DB >> 36125762

Simplified Enzymatic Synthesis of 2-Keto-3-Deoxy-D-Gluconate from D-Gluconate Using the Gluconate Dehydratase from Thermoproteus tenax.

Svenja Höfmann1, Promise Akua Dziwornu1, Thomas Klaus1, Thomas Knura1, Roland Wohlgemuth2, Christopher Bräsen1, Bettina Siebers3.   

Abstract

Many research areas, e.g., basic research but also applied fields of biotechnology, biomedicine, and diagnostics often suffer from the unavailability of metabolic compounds. This is mostly due to missing easy and efficient synthesis procedures. We herein describe the biocatalytic/enzymatic production of 2-keto-3-deoxy-D-gluconate, an intermediate of central metabolic pathways in all three domains of life and also of bacterial polysaccharides, lipopolysaccharides, and cell wall components. The method is based on the gluconate dehydratase from the hyperthermophilic crenarchaeon Thermoproteus tenax, which can be easily recombinantly overproduced in Escherichia coli and-due to its intrinsic thermostability-rapidly be purified by two precipitation steps. The enzyme completely converts D-gluconate to solely stereochemically pure KDG, taking benefits from the enol-keto-tautomerism of the primary reaction product. The final product can then easily be separated from the protein by ultrafiltration. The simple one-step procedure, which is suitable at least for the lab-scale/gram-scale production of KDG, replaces lengthy multi-step reactions and is easily scalable. This approach also illustrates the great application potential of Archaea with their unusual metabolic pathways and enzymes for the synthesis of added value products.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  2-keto-3-deoxy-D-gluconate (KDG); Ammonium sulfate precipitation; D-gluconate; Gluconate dehydratase (GAD); Heat precipitation; Thin layer chromatography (TLC); Thiobarbituric acid (TBA); Ultrafiltration

Mesh:

Substances:

Year:  2022        PMID: 36125762     DOI: 10.1007/978-1-0716-2445-6_23

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  12 in total

1.  Carbohydrate metabolism in Rhodopseudomonas sphreoides.

Authors:  M SZYMONA; M DOUDOROFF
Journal:  J Gen Microbiol       Date:  1960-02

2.  The formation of 2-keto-3-deoxyheptonic acid in extracts of Escherichia coli B. I. Identification.

Authors:  A WEISSBACH; J HURWITZ
Journal:  J Biol Chem       Date:  1959-04       Impact factor: 5.157

3.  The oxidation of L-arabinose by Pseudomonas saccharophila.

Authors:  R WEIMBERG; M DOUDOROFF
Journal:  J Biol Chem       Date:  1955-12       Impact factor: 5.157

4.  Glucose and gluconic acid oxidation of Pseudomonas saccharophila.

Authors:  N ENTNER; M DOUDOROFF
Journal:  J Biol Chem       Date:  1952-05       Impact factor: 5.157

Review 5.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

6.  2-keto-3-deoxyl-L-arabonate aldolase and its role in a new pathway of L-arabinose degradation.

Authors:  A S Dahms; R L Anderson
Journal:  Biochem Biophys Res Commun       Date:  1969-08-22       Impact factor: 3.575

7.  One-step synthesis of 2-keto-3-deoxy-d-gluconate by biocatalytic dehydration of d-gluconate.

Authors:  Kohei Matsubara; Rudi Köhling; Bernhard Schönenberger; Theresa Kouril; Dominik Esser; Christopher Bräsen; Bettina Siebers; Roland Wohlgemuth
Journal:  J Biotechnol       Date:  2014-07-14       Impact factor: 3.307

8.  New pathway for nonphosphorylated degradation of gluconate by Aspergillus niger.

Authors:  T A Elzainy; M M Hassan; A M Allam
Journal:  J Bacteriol       Date:  1973-04       Impact factor: 3.490

9.  Basic principles of electrolyte chemistry for microfluidic electrokinetics. Part I: Acid-base equilibria and pH buffers.

Authors:  Alexandre Persat; Robert D Chambers; Juan G Santiago
Journal:  Lab Chip       Date:  2009-07-07       Impact factor: 6.799

10.  A combined experimental and modelling approach for the Weimberg pathway optimisation.

Authors:  Lu Shen; Martha Kohlhaas; Junichi Enoki; Roland Meier; Bernhard Schönenberger; Roland Wohlgemuth; Robert Kourist; Felix Niemeyer; David van Niekerk; Christopher Bräsen; Jochen Niemeyer; Jacky Snoep; Bettina Siebers
Journal:  Nat Commun       Date:  2020-02-27       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.