Literature DB >> 36125284

Draft Genome Sequence of Glutamicibacter sp. Strain JC586, Isolated from Soil Sediment of the Floating Islands of Loktak Lake, India.

Khongsai L Lhingjakim1, Chintalapati Sasikala2, Chintalapati Venkata Ramana1.   

Abstract

The 3.52-Mbp whole-genome sequence of a Glutamicibacter sp. strain isolated from soil sediment of the floating islands of Loktak Lake is reported. The genomic information here gives insight into the presence of genes linked to oxidative stress, osmo-protection, and cold shock proteins which helps in the survival of the organism under extreme environmental conditions.

Entities:  

Year:  2022        PMID： 36125284      PMCID： PMC9583790          DOI： 10.1128/mra.00746-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  7 in total

1.  Metagenomic approach to characterize soil microbial diversity of Phumdi at Loktak Lake.

Authors:  Sampada Puranik; Rajesh Ramavadh Pal; Ravi Prabhakar More; Hemant J Purohit
Journal:  Water Sci Technol       Date:  2016-11       Impact factor: 1.915

2.  Glutamicibacter mishrai sp. nov., isolated from the coral Favia veroni from Andaman Sea.

Authors:  Lipika Das; Sushanta Deb; Subrata K Das
Journal:  Arch Microbiol       Date:  2019-12-03       Impact factor: 2.552

3.  Diversity of Bacterial Microbiota of Coastal Halophyte Limonium sinense and Amelioration of Salinity Stress Damage by Symbiotic Plant Growth-Promoting Actinobacterium Glutamicibacter halophytocola KLBMP 5180.

Authors:  Sheng Qin; Wei-Wei Feng; Yue-Ji Zhang; Tian-Tian Wang; You-Wei Xiong; Ke Xing
Journal:  Appl Environ Microbiol       Date:  2018-09-17       Impact factor: 4.792

4.  A large-scale evaluation of algorithms to calculate average nucleotide identity.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Jeongmin Lim; Soonjae Kwon; Jongsik Chun
Journal:  Antonie Van Leeuwenhoek       Date:  2017-02-15       Impact factor: 2.271

5.  ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter.

Authors:  Shaun D Jackman; Benjamin P Vandervalk; Hamid Mohamadi; Justin Chu; Sarah Yeo; S Austin Hammond; Golnaz Jahesh; Hamza Khan; Lauren Coombe; Rene L Warren; Inanc Birol
Journal:  Genome Res       Date:  2017-02-23       Impact factor: 9.043

6.  Coproporphyrin III Produced by the Bacterium Glutamicibacter arilaitensis Binds Zinc and Is Upregulated by Fungi in Cheese Rinds.

Authors:  Jessica L Cleary; Shilpa Kolachina; Benjamin E Wolfe; Laura M Sanchez
Journal:  mSystems       Date:  2018-08-21       Impact factor: 6.496

7.  FastUniq: a fast de novo duplicates removal tool for paired short reads.

Authors:  Haibin Xu; Xiang Luo; Jun Qian; Xiaohui Pang; Jingyuan Song; Guangrui Qian; Jinhui Chen; Shilin Chen
Journal:  PLoS One       Date:  2012-12-20       Impact factor: 3.240
  7 in total

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