Literature DB >> 36119835

Cuproptosis-related gene SLC31A1 is a potential predictor for diagnosis, prognosis and therapeutic response of breast cancer.

Xiao Li1, Zhaosheng Ma2, Linhang Mei2.   

Abstract

Cuproptosis is a recently reported novel way of cell death. A comprehensive study regarding expression, function and mechanism of cuproptosis-related genes in breast cancer is still absent. In this work, a series of in silico analyses were employed and SLC31A1 was selected as the most potential cuproptosis-related gene in breast cancer, which was statistically upregulated and possessed significant abilities to predict diagnosis, prognosis and drug response. Moreover, SLC31A1 was significantly positively correlated with different immune cell infiltration levels, immune cell biomarkers or immune checkpoints in breast cancer. Upstream G2E3-AS1/let-7a-5p and CDKN2B-AS1/let-7b-5p pathways were found to be responsible for SLC31A1 upregulation in breast cancer based on competing endogenous RNA mechanism. Furthermore, we found that SLC31A1 overexpression might be also induced by its high copy number level in breast cancer. Collectively, our current data elucidated that cuproptosis-related SLC31A1 might be a promising diagnostic/prognostic biomarker and drug responsive predictor in breast cancer. AJCR
Copyright © 2022.

Entities:  

Keywords:  Cuproptosis; SLC31A1; bioinformatic analysis; breast cancer; copper; ncRNA; prognosis

Year:  2022        PMID: 36119835      PMCID: PMC9442001     

Source DB:  PubMed          Journal:  Am J Cancer Res        ISSN: 2156-6976            Impact factor:   5.942


  44 in total

1.  GEPIA2021: integrating multiple deconvolution-based analysis into GEPIA.

Authors:  Chenwei Li; Zefang Tang; Wenjie Zhang; Zhaochen Ye; Fenglin Liu
Journal:  Nucleic Acids Res       Date:  2021-07-02       Impact factor: 16.971

2.  Functional analysis of MTF-1 and MT promoters and their transcriptional response to zinc (Zn) and copper (Cu) in yellow catfish Pelteobagrus fulvidraco.

Authors:  Guang-Hui Chen; Wuhong Lv; Yi-Huan Xu; Xiao-Lei Wei; Yi-Chuang Xu; Zhi Luo
Journal:  Chemosphere       Date:  2020-01-02       Impact factor: 7.086

Review 3.  ceRNA cross-talk in cancer: when ce-bling rivalries go awry.

Authors:  Florian A Karreth; Pier Paolo Pandolfi
Journal:  Cancer Discov       Date:  2013-09-26       Impact factor: 39.397

4.  TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells.

Authors:  Taiwen Li; Jingyu Fan; Binbin Wang; Nicole Traugh; Qianming Chen; Jun S Liu; Bo Li; X Shirley Liu
Journal:  Cancer Res       Date:  2017-11-01       Impact factor: 12.701

5.  XIAP, commonly targeted by tumor suppressive miR-3607-5p and miR-3607-3p, promotes proliferation and inhibits apoptosis in hepatocellular carcinoma.

Authors:  Weiyang Lou; Jing Chen; Bisha Ding; Weimin Fan
Journal:  Genomics       Date:  2021-02-12       Impact factor: 5.736

6.  ncRNAs-mediated high expression of SEMA3F correlates with poor prognosis and tumor immune infiltration of hepatocellular carcinoma.

Authors:  Weiyang Lou; Wenlong Wang; Jing Chen; Shuqian Wang; Yuan Huang
Journal:  Mol Ther Nucleic Acids       Date:  2021-04-01       Impact factor: 8.886

Review 7.  Copper-induced tumor cell death mechanisms and antitumor theragnostic applications of copper complexes.

Authors:  Yicheng Jiang; Zhiyi Huo; Xiaole Qi; Tongmei Zuo; Zhenghong Wu
Journal:  Nanomedicine (Lond)       Date:  2022-01-21       Impact factor: 5.307

8.  YTHDF1 alleviates sepsis by upregulating WWP1 to induce NLRP3 ubiquitination and inhibit caspase-1-dependent pyroptosis.

Authors:  Shuyao Zhang; Xinmin Guan; Wei Liu; Zhe Zhu; Hong Jin; Youfeng Zhu; Yun Chen; Min Zhang; Chengcheng Xu; Xu Tang; Jing Wang; Wang Cheng; Weihua Lin; Xiaoke Ma; Jianliang Chen
Journal:  Cell Death Discov       Date:  2022-05-04

9.  Cuproptosis: lipoylated TCA cycle proteins-mediated novel cell death pathway.

Authors:  Su-Ran Li; Lin-Lin Bu; Lulu Cai
Journal:  Signal Transduct Target Ther       Date:  2022-05-13

10.  Knockdown of long non-coding RNA CDKN2B-AS1 suppresses the progression of breast cancer by miR-122-5p/STK39 axis.

Authors:  Shaojie Qin; Mingliang Ning; Qingyuan Liu; Xiaoyun Ding; Yanbai Wang; Qilun Liu
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

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