| Literature DB >> 36119621 |
Aristide Carlos Houdegbe1,2, Enoch G Achigan-Dako2, E O Dêêdi Sogbohossou2, M Eric Schranz3, Alfred O Odindo4, Julia Sibiya1.
Abstract
Understanding the genetic variability within a plant species is paramount in implementing a successful breeding program. Spider plant (Gynandropsis gynandra) is an orphan leafy vegetable and an extraordinary source of vitamins, secondary metabolites and minerals, representing an important resource for combatting malnutrition. However, an evaluation of the leaf elemental composition, using a worldwide germplasm collection to inform breeding programs and the species valorization in human nutrition is still lacking. The present study aimed to profile the leaf elemental composition of G. gynandra and depict any potential geographical signature using a collection of 70 advanced lines derived from accessions originating from Asia and Eastern, Southern and West Africa. The collection was grown in a greenhouse using a 9 × 8 alpha lattice design with two replications in 2020 and 2021. Inductively coupled plasma-optical emission spectrometry was used to profile nine minerals contents. A significant difference (p < 0.05) was observed among the lines for all nine minerals. Microelements such as iron, zinc, copper and manganese contents ranged from 12.59-430.72, 16.98-166.58, 19.04-955.71, 5.39-25.10 mg kg-1 dry weight, respectively, while the concentrations of macroelements such as potassium, calcium, phosphorus and magnesium varied in the ranges of 9992.27-49854.23, 8252.80-33681.21, 3633.55-14216.16, 2068.03-12475.60 mg kg-1 dry weight, respectively. Significant and positive correlations were observed between iron and zinc and calcium and magnesium. Zinc, calcium, phosphorus, copper, magnesium, and manganese represented landmark elements in the genotypes. Eastern and Southern African genotypes were clustered together in group 1 with higher phosphorus, copper and zinc contents than Asian and West African lines, which clustered in group 2 and were characterized by higher calcium, magnesium and manganese contents. An additional outstanding group 3 of six genotypes was identified with high iron, zinc, magnesium, manganese and calcium contents and potential candidates for cultivar release. The genotype × year interaction variance was greater than the genotypic variance, which might translate to phenotypic plasticity in the species. Broad-sense heritability ranged from low to high and was element-specific. The present results reveal the leaf minerals diversity in spider plant and represent a baseline for implementing a minerals-based breeding program for human nutrition.Entities:
Keywords: African leafy vegetable; Cleome gynandra; breeding; genetic diversity; human nutrition; local adaptation; nutrient content
Year: 2022 PMID: 36119621 PMCID: PMC9478508 DOI: 10.3389/fpls.2022.841226
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 6.627
List of advanced lines of Gynandropsis gynandra used in this study and their origin.
| Genotype | Genebank of the original accession | Country of origin | Generation of selfing | Region |
|---|---|---|---|---|
| EA1 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| EA2 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| EA3 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| EA4 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| WA1 | University of Ouagadougou | Burkina-Faso | S4 | West Africa |
| WA2 | University of Ouagadougou | Burkina-Faso | S4 | West Africa |
| EA5 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| EA6 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| WA3 | University of Ouagadougou | Burkina-Faso | S4 | West Africa |
| WA4 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA5 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA6 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA7 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA8 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA9 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA10 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Benin | S4 | West Africa |
| WA11 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA12 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA13 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA14 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA15 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA16 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA17 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| WA18 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Togo | S4 | West Africa |
| AS1 | World Vegetable Center | Thailand | S4 | Asia |
| AS2 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| AS3 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| AS4 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| AS5 | World Vegetable Center | Thailand | S4 | Asia |
| AS6 | World Vegetable Center | Thailand | S4 | Asia |
| EA7 | World Vegetable Center | Kenya | S4 | Eastern Africa |
| SA1 | World Vegetable Center | Zambia | S4 | Southern Africa |
| AS7 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| AS8 | World Vegetable Center | Malaysia | S4 | Asia |
| AS9 | World Vegetable Center | Malaysia | S4 | Asia |
| AS10 | World Vegetable Center | Malaysia | S4 | Asia |
| AS11 | World Vegetable Center | Malaysia | S4 | Asia |
| AS12 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| EA8 | World Vegetable Center | Uganda | S4 | Eastern Africa |
| EA9 | World Vegetable Center | Uganda | S4 | Eastern Africa |
| EA10 | World Vegetable Center | Uganda | S4 | Eastern Africa |
| EA11 | World Vegetable Center | Uganda | S4 | Eastern Africa |
| SA2 | World Vegetable Center | Malawi | S4 | Southern Africa |
| SA3 | World Vegetable Center | Malawi | S4 | Southern Africa |
| EA12 | World Vegetable Center | Kenya | S4 | Eastern Africa |
| EA13 | World Vegetable Center | Kenya | S4 | Eastern Africa |
| SA4 | World Vegetable Center | South Africa | S4 | Southern Africa |
| SA5 | World Vegetable Center | Zambia | S4 | Southern Africa |
| AS13 | World Vegetable Center | Taiwan | S4 | Asia |
| SA6 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Mozambique | S4 | Southern Africa |
| EA14 | National Museums of Kenya | Kenya | S4 | Eastern Africa |
| AS14 | World Vegetable Center | Malaysia | S4 | Asia |
| AS15 | World Vegetable Center | Thailand | S4 | Asia |
| AS16 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| AS17 | World Vegetable Center | Lao People’s Democratic Republic | S4 | Asia |
| SA7 | Okakarara | Namibia | S4 | Southern Africa |
| SA8 | Otjiwarongo | Namibia | S4 | Southern Africa |
| SA9 | Lilongwe University of Agriculture and Natural Resources | Malawi | S4 | Southern Africa |
| SA10 | Lilongwe University of Agriculture and Natural Resources | Malawi | S4 | Southern Africa |
| SA11 | Mahenene Research Station | Namibia | S4 | Southern Africa |
| SA12 | Chitedze Research Station | Malawi | S4 | Southern Africa |
| SA13 | Namibia Botanical Gardens | Namibia | S4 | Southern Africa |
| SA14 | Namibia Botanical Gardens | Namibia | S4 | Southern Africa |
| SA16 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Zimbabwe | S4 | Southern Africa |
| AS18 | Wageningen University and Research | Malaysia | S4 | Asia |
| SA17 | Okakarara | Namibia | S4 | Southern Africa |
| SA18 | Lilongwe University of Agriculture and Natural Resources | Malawi | S4 | Southern Africa |
| SA19 | Lilongwe University of Agriculture and Natural Resources | Malawi | S4 | Southern Africa |
| SA20 | Chitedze Research Station | Malawi | S4 | Southern Africa |
| SA21 | Laboratory of Genetics, Biotechnology and Seed Science (GBioS), University of Abomey-Calavi | Zimbabwe | S4 | Southern Africa |
Provided to the Laboratory of Genetics, Biotechnology and Seed Science (GBioS) of University of Abomey-Calavi by Tomas Massingue (Mozambique) and Admire Shayanowako (Zimbabwe).
Descriptive statistics of nine mineral contents in a population of 70 advanced lines of G. gynandra evaluated across years (2020 and 2021).
| Minerals | Mean | Minimum | Maximum | Range | Standard error | Coefficient of variation (%) |
|---|---|---|---|---|---|---|
| Ca | 18539.7 | 8252.8 | 33681.21 | 25428.41 | 287.92 | 25.94 |
| Cu | 12.17 | 5.39 | 25.1 | 19.71 | 0.23 | 31.35 |
| Fe | 133.04 | 12.59 | 430.72 | 418.14 | 3.53 | 43.98 |
| K | 26393.85 | 9992.27 | 49854.23 | 39861.96 | 355.74 | 22.51 |
| Mg | 6719.83 | 2068.03 | 12475.6 | 10407.56 | 109.61 | 27.15 |
| Mn | 217.68 | 19.04 | 955.71 | 936.67 | 8.75 | 66.98 |
| Na | 1143.55 | 535.92 | 2165.9 | 1629.98 | 16.91 | 24.61 |
| P | 8558.29 | 3633.55 | 14216.16 | 10582.61 | 122.85 | 23.89 |
| Zn | 55.85 | 16.98 | 166.58 | 149.59 | 1.29 | 38.67 |
All minerals concentration (mg kg−1 dry weight).
Figure 1Variation in leaf macroelements content among 70 advanced lines of Gynandropsis gynandra evaluated across years (2020 and 2021). (A) Calcium content; (B) Potassium content; (C) Magnesium content and (D) Phosphorus content. Bar plots are means and error bars represent standard errors across years (n = 4).
Figure 2Variation in leaf microelements content among 70 advanced lines of G. gynandra evaluated across years (2020 and 2021). (A) Iron content; (B) Copper content; (C) Manganese content and (D) Zinc content. Bar plots are means and error bars represent standard errors across years (n = 4).
Figure 3Variation in leaf sodium content among 70 advanced lines of G. gynandra evaluated in 2020 and 2021. Bar plots are the means, and error bars represent standard errors across years (n = 4).
Estimates of genetic parameters for the leaf mineral content in 70 advanced lines of G. gynandra evaluated across years (2020 and 2021).
| Genetic parameters | Ca | Cu | Fe | K | Mg | Mn | Na | P | Zn |
|---|---|---|---|---|---|---|---|---|---|
| 12840936.25 ± 2842625.89 | 0.73 ± 1.22 | 0.00 ± NA | 7035034.9 ± 3377570.85 | 987563.75 ± 329479.35 | 3639.83 ± 2458.75 | 16228.06 ± 9466.68 | 2551218.53 ± 587213.33 | 157.17 ± 55.79 | |
| 1842253.44 ± 2749025.01 | 0.52 ± 1.07 | 15.81 ± 75.11 | 127443.83 ± 658427.20 | 1484647.33 ± 2131238.43 | 1977.21 ± 3129.67 | 0.00 ± NA | 0.21 ± NA | 41.57 ± 64.43 | |
| 4664094.80 ± 1238432.51 | 5.19 ± 1.69 | 1703.78 ± 330.12 | 13459157.61 ± 3571965.16 | 1534003.85 ± 266444.04 | 16369.1 ± 2807.40 | 57942.85 ± 10265.64 | 1547882.61 ± 272119.80 | 269.59 ± 47.53 | |
| 4847991.37 ± 813500.07 | 7.72 ± 1.42 | 1743.47 ± 293.14 | 14043558.52 ± 2400108.74 | 60650.78 ± 10361.10 | 234.13 ± 40.28 | 5487.84 ± 930.75 | 119358.44 ± 20637.24 | 18.93 ± 3.22 | |
| 16384981.49 ± 2774396.71 | 5.25 ± 0.92 | 1287.76 ± 155.95 | 17275503.34 ± 2912547.10 | 1769728.37 ± 301346.98 | 11882.91 ± 2023.28 | 46571.45 ± 7931.71 | 3354999.44 ± 571368.64 | 296.69 ± 50.52 | |
| 0.78 ± 0.05 | 0.14 ± 0.21 | 0.00 ± 0.00 | 0.41 ± 0.14 | 0.56 ± 0.11 | 0.31 ± 0.17 | 0.35 ± 0.16 | 0.76 ± 0.06 | 0.53 ± 0.11 | |
| Mean | 18530.05 | 12.23 | 133.57 | 26413.46 | 6716.95 | 216.63 | 1143.50 | 8568.63 | 55.89 |
| GCV (%) | 19.34 | 6.97 | 0.03 | 10.04 | 14.79 | 27.85 | 11.14 | 18.64 | 22.43 |
| PCV (%) | 21.84 | 18.73 | 26.87 | 15.74 | 19.81 | 50.32 | 18.87 | 21.38 | 30.82 |
| ECV (%) | 11.88 | 22.70 | 31.26 | 14.19 | 3.67 | 7.06 | 6.48 | 4.03 | 7.78 |
| GA | 6534.93 | 0.65 | 0 | 3486.73 | 1529.25 | 68.78 | 154.91 | 2869.25 | 18.80 |
| GAM (%) | 35.27 | 5.34 | 0 | 13.2 | 22.77 | 31.75 | 13.55 | 33.49 | 33.63 |
, genotypic variance; , year variance; , genotype × year interaction variance; , residual variance; , phenotypic variance; , broad-sense heritability; GCV, genotypic coefficient of variation; PCV, phenotypic coefficient of variation; ECV, residual coefficient of variation; GA, genetic advance; GAM, genetic advance over mean.
Phenotypic correlation coefficients (below diagonal) and genotypic correlation coefficients (above diagonal) among nine leaf mineral concentrations in a population of 70 advanced lines of G. gynandra.
| Minerals | Ca | Cu | Fe | K | Mg | Mn | Na | P | Zn |
|---|---|---|---|---|---|---|---|---|---|
| Ca | −0.20 | 0.00 | 0.00 |
|
| −0.02 |
| −0.19 | |
| Cu | −0.11 | 0.00 |
|
|
|
|
| 0.12 | |
| Fe | 0.11 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | |
| K | 0.13 | 0.07 | −0.02 | −0.23 | −0.10 |
| 0.23 | 0.06 | |
| Mg |
| −0.21 |
| 0.01 |
| −0.11 |
|
| |
| Mn | 0.17 | −0.16 |
| 0.03 |
| 0.04 |
|
| |
| Na | 0.06 | 0.03 | 0.03 |
| 0.11 | 0.12 | −0.19 |
| |
| P |
|
| 0.14 |
|
| −0.16 | −0.06 |
| |
| Zn | −0.12 | 0.17 |
| 0.17 | 0.05 |
| −0.08 |
|
Values in bold are significant at p < 0.05.
Values in bold are significant at p < 0.01.
Values in bold are significant at p < 0.001.
The direct (bold diagonal numbers) and indirect effects of eight mineral elements on iron content in a population of 70 advanced lines of G. gynandra.
| Minerals | Ca | Cu | K | Mg | Mn | Na | P | Zn | Fe |
|---|---|---|---|---|---|---|---|---|---|
| Ca |
| 0.01 | −0.03 | 0.06 | 0.07 | 0.00 | −0.24 | −0.02 | 0.11 |
| Cu | −0.03 |
| −0.01 | −0.02 | −0.06 | 0.00 | 0.17 | 0.03 | 0.01 |
| K | 0.03 | 0.00 |
| 0.00 | 0.01 | 0.02 | 0.10 | 0.03 | −0.02 |
| Mg | 0.18 | 0.01 | 0.00 |
| 0.15 | 0.01 | −0.16 | 0.01 | 0.28 |
| Mn | 0.05 | 0.01 | −0.01 | 0.03 |
| 0.01 | −0.07 | 0.09 | 0.49 |
| Na | 0.02 | 0.00 | −0.06 | 0.01 | 0.05 |
| −0.03 | −0.01 | 0.03 |
| P | −0.15 | −0.03 | −0.05 | −0.03 | −0.06 | 0.00 |
| 0.05 | 0.14 |
| Zn | −0.03 | −0.01 | −0.04 | 0.00 | 0.19 | 0.00 | 0.13 |
| 0.42 |
Residual effect = 0.61.
Correlation value significant at p < 0.05.
Correlation values significant at p < 0.001.
Figure 4Correlation circle showing leaf mineral elements projection on (A) the first two principal components and (B) the first and third principal components. Cos2 refers to the quality of representation for variables on the principal component.
Figure 5Biplots of the first principal component (PC1) versus the second principal component (PC2) for the leaf elemental composition in a population of 70 advanced lines of G. gynandra. Ninety percent bivariate ellipses were represented for lines from the same geographical origin. Asia (n = 18), Eastern Africa (n = 14), Southern Africa (n = 20); and West Africa (n = 18).
Figure 6Factor map displaying the grouping pattern of 70 advanced lines of G. gynandra based on the hierarchical clustering on principal components analysis (HCPC). Cluster 1 (n = 31), Cluster 2 (n = 33) and Cluster 3 (n = 6). AS: Asia; EA, Eastern Africa; SA, Southern Africa; WA, West Africa.
Figure 7Clusters’ performance comparison based on nine elemental compositions of the leaf of G. gynandra. (A) Calcium content; (B) Copper content; (C) Iron content; (D) Potassium content; (E) Magnesium content; (F) Manganese content; (G) Sodium content; (H) Phosphorus content; and (I) Zinc content. Cluster 1 (n = 31), Cluster 2 (n = 33) and Cluster 3 (n = 6). Boxplots with the same alphabetic letter are not significantly different at p < 0.05 according to Dunn’s post-hoc test.