| Literature DB >> 36119097 |
Jack Bleesing1,2.
Abstract
In this article, we will share lessons that patients with gain-of-function defects in Toll-like receptor 8 (TLR8-GOF) can teach us about the interface between bone marrow failure (BMF) disorders and inborn errors of immunity (IEI), subsequently referred to as "Interface Disorders". TLR8-GOF is a relatively young entity (from a discovery standpoint) that-through both similar and dissimilar disease characteristics-can increase our understanding of interface disorders, for example, as it pertains to pathophysiology, the genetic mechanism of disease, and related diagnostics and therapeutics. From a genetics point of view, TLR8-GOF joins a growing list of (interface) disorders that can cause disease both with germline and somatic (mosaic) genetic variants. This not only has repercussions for the diagnostic workup of these disorders, inasmuch that routine genetic testing may miss somatic variants, but has therapeutic implications as well, for example, with the approach to curative treatment, such as hematopoietic stem cell transplantation. Following an introduction and schematic rendering of the interface, we will review the salient features of TLR8-GOF, with the understanding that the phenotype of this new disorder is likely not written in stone yet. In keeping with the principle of "Form Follows Function", we will discuss specific immunological biomarkers that can be measured in clinical laboratories and highlight key disease features that pertain to TLR8-GOF, and can be found in several interface disorders. As can be seen from a schematic representation, the interface provides not only opportunities for learning and collaboration with respect to shared diagnostics but also the potential for drug repurposing and precision therapeutics. Ideally, collaboration also focuses on education and teaching, such that cross-fertilization and collaboration across these disciplines can create a framework for complementary research.Entities:
Keywords: bone marrow failure disorders; gain-of-function (GoF) mutation; inborn errors of immunity; infections; somatic mosacism
Mesh:
Substances:
Year: 2022 PMID: 36119097 PMCID: PMC9479092 DOI: 10.3389/fimmu.2022.935321
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 8.786
Figure 1Schematic rendering of the bone marrow failure (BMF)/inborn errors of immunity (IEI) interface. Color codes arbitrarily refer to disorders that fit more with BMF (red) or more with IEI (dark blue). Light blue signifies the disorders of thymus development, while green represents immuno-osseous dysplasia disorders. Several genes, such as IKZF1 and WAS, cause disease through different genetic mechanisms (e.g., loss-of-function mutations in WAS cause Wiskott–Aldrich syndrome, while gain-of-function mutations cause X-linked neutropenia). See for a detailed listing of disorders that one could find in or near the interface. Terms in italics refer to genes and non-italic to disorders. **, CID on the basis of Good Syndrome. ##, Different Genetic Mechanisms.
Representative examples of Interface disorders (following the current IUIS Classification – see Reference 3).
| 2021 IUIS Table, Section | Subcategory | Disease | Gene[s] | Inheritance/Mechanism | OMIM |
|---|---|---|---|---|---|
|
| [S]CID* | RAG-def |
| AR |
|
| DCLRE1C-def |
| AR |
| ||
| DNA PKcs-def |
| AR |
| ||
| Cernunnos/XLF-def |
| AR |
| ||
| DNA ligase IV-def |
| AR |
| ||
|
| CID | CD3γ-def |
| AR |
|
| ZAP70-def |
| AR |
| ||
| PAX1-def |
| AR |
| ||
| HELIOS-def |
| AD/AR | NA | ||
|
| DNA Repair Defects | Ataxia-telangiectasia |
| AR |
|
| Nijmegen breakage S. |
| AR |
| ||
| Bloom Syndrome |
| AR |
| ||
| ICF type 1 |
| AR |
| ||
| Hebo-def |
| AR |
| ||
|
| Thymic Defects | DiGeorge Syndrome |
| AD |
|
| CHARGE Syndrome |
| AD |
| ||
|
| Immuno-osseous Dysplasias | Cartilage Hair Hypoplasia |
| AR |
|
| Schimke -IOD |
| AR |
| ||
| MYSM1-def |
| AR |
| ||
|
| Hyper IgE Syndromes | PGM3-def |
| AR |
|
|
| PNP-def |
| AR |
| |
| Kabuki S. (type 1/2) |
| AD/XLR |
| ||
|
| APDS |
| AD-GOF |
| |
| IKAROS-def |
| AD/haploinsuff. |
| ||
| PTEN-def |
| AD |
| ||
| NFKB1-def |
| AD |
| ||
| TWEAK-def |
| AD |
| ||
| TRNT1-def |
| AR |
| ||
| AID-def |
| AR |
| ||
|
| Tregopathy | IPEX |
| XLR |
|
| CD25-def |
| AR |
| ||
| CD122-def |
| AR |
| ||
| CTLA4-haploinsuff. |
| AD |
| ||
| LRBA-def |
| AR |
| ||
| STAT3-GOF Disease |
| AD-GOF |
| ||
| BACH2-def |
| AD |
| ||
| IKAROS-GOF Disease |
| AD-GOF | NA | ||
|
| APECED (APS-1) |
| AR or AD |
| |
| TPP2-def |
| AR |
| ||
| SOCS1-haploinsuff. |
| AD |
| ||
| PD1-def |
| AR |
| ||
|
| ALPS | ALPS-FAS |
| AD OR AR |
|
| ALPS-FASLG |
| AR |
| ||
| ALPS-CASP10 |
| AD |
| ||
|
| X-linked Neutropenia |
| XL-GOF |
| |
| Shwachman-Diamond S. |
| AR |
| ||
|
| GATA2-def |
| AD |
| |
|
| WHIM |
| AD-GOF |
| |
|
| STAT1-GOF Disease |
| AD-GOF |
| |
|
| TLR8-GOF Disease |
| XL/XL-somatic | NA | |
|
| Fanconi Anemia (FA) | FA Type A-W (22 complementation groups) |
| AR (XLR) |
|
| Telomeropathy | DKCX1 |
| XL |
| |
| DKCA1, DKCA2, DKCA3, DKCA4, DKCA6 |
| AD |
| ||
| DKCB1-DKCB7 |
| AR |
| ||
| Bone Marrow Failure S. | BMFS5 |
| AD |
| |
| MECOM-def |
| AD |
| ||
| MIRAGE |
| AD-GOF |
| ||
| Ataxia-Pancytopenia S. |
| AD-GOF |
| ||
|
| ALPS | ALPS-sFAS |
| ||
| RASopathy | RALD |
| |||
|
| VEXAS |
| |||
| CID | Good Syndrome (Thymoma) | unknown | |||
| TLR8-GOF Disease |
| ||||
|
| Diamond-Blackfan Anemia (DBA, many types) | DBA-1 |
| AD (XLR) |
|
| Myelodysplastic Syndrome | NA | ||||
| PNH |
|
| |||
| Pure Red Cell Aplasia (can be associated with thymoma) | NA | ||||
| Severe Aplastic Anemia (acquired condition) | NA |
*, Usually manifesting as T-/B- SCID but can present as CID as well with certain genetic (hypomorphic) variants.
NA, Not Applicable.
Figure 2Illustrative flow cytometry cases showing abnormal T cells in several interface disorders. (A) Patient #3 from (8) demonstrated a discrepancy in CD45RO (memory) and CD45RA (naïve) expression between CD4+ T cells (upper left) and CD8+ T cells (upper right). Adding additional markers revealed that these CD45RA+/CD8+ T cells were not naïve T cells but rather TEMRAs (T-cell effector memory, RA-expressing), as determined by the lack of CD27 and CCR7 expression. (B) CD45RA-expressing T cells are also common in ALPS and in T-LGLL. Moreover, double-negative T cells in ALPS and T-LGL cells in T-LGLL express an unusual CD45RA isoform, B220. See text for further discussion.
|
|
| 1] Which is more prominent: germline or somatic versions of the disease? |
| 2] Are germline variants merely an extension of somatic variants or give somatic variants and germline variants rise to different entities (Noonan syndrome versus RALD)? |
| 3] Is the mutational landscape the same, and/or are there somatic variants that have not been found in the germline setting (perhaps not compatible with life)? |
| 4] What is the mechanism of the variant (e.g., LOF/GOF)? |
| 5] What is the variant allele frequency (VAF), and how does it relate to phenotype? |
| 6] Related—which cells/tissues are affected—contributing to the overall VAF, and what does that say about the origin of the somatic variant? Affected cells? |
| 7] Is the VAF the same for affected cells/tissues? If not, what could be the reason (e.g., survival advantage), and is it stable over time? |
| 8] What about contemporary next-generation sequencing (NGS) genetic testing and the detection of somatic variants |
| ALPS | Autoimmune lymphoproliferative syndrome |
| CD25D | CD25 deficiency |
| CHH | Cartilage hair hypoplasia |
| CID | Combined immunodeficiency |
| CHD7 | Chromodomainhelicase-DNA-binding protein 7 |
| CTLA4 | Cytotoxic Tlymphocyte-associated protein 4 |
| DADA2 | Deficiency of the enzyme ADA2 (adenosine deaminase 2) |
| DBA | Diamond blackfan anemia |
| DGS | DiGeorge syndrome |
| DKC | Dyskeratosis congenita |
| DNT | Double-negative T cells |
| FA | Fanconi anemia |
| GATA2 | GATA binding protein 2 |
| HSCT | Hematopoietic stem cell transplantation |
| IKZF1 | IKAROS family zinc finger 1 |
| IPEX | Immune dysregulation, polyendocrinopathy, enteropathy, X-linked |
| LGL | Large granular lymphocyte |
| LRBA | LPS responsive beige-like anchor protein |
| MDS | Myelodysplastic syndrome |
| MYSM1 | Myb-like |
| SWIRM | and MPN domains 1 |
| PNH | Paroxysmal nocturnal hemoglobinuria |
| PRCA | Pure red cell aplasia |
| PDCD1 | Programmed cell death protein 1 |
| RA/FS | Rheumatoid arthritis/Felty syndrome |
| RALD | Ras-associated autoimmune leukoproliferative disorder |
| RSD | Radiation-sensitivity disorders |
| SAA | Severe aplastic anemia |
| SAMD9[L] | Sterile alpha motif domain containing 9 [like] |
| DS | Shwachman– Diamond syndrome |
| SIOD | Schimke immuno-osseous dysplasia |
| STAT3-D | Signal transducer and activator of transcription 3-disease |
| TEMRA | T-cell effector memory, RAexpressing |
| T-LGLL | T-large granular lymphocyte leukemia; |
| TLR8 | Toll-like receptor 8 [gain-of-function] |
| VAF | Variant allele frequency |
| WAS | Wiskott–Aldrich syndrome |
| WHIM | Warts, hypogammaglobulinemia, infections, myelokathexis |