| Literature DB >> 36118824 |
Cunbing Xia1,2, Dexuan Chen1,2, Gaoyuan Wang1,2, Haijian Sun1,2, Jingran Lin1,2, Chen Chen1,2, Tong Shen1,2, Hui Cheng1,2, Chao Pan1,2, Dong Xu3, Hongbao Yang4, Yongkang Zhu1,2, Hong Zhu1,2.
Abstract
Traditional Chinese medicine (TCM) is applied in the anticancer adjuvant therapy of various malignancies and pancreatic cancer included. Xiaoji recipe consists several TCM materials with anticancer activities. In our work, we intended to analyze the molecular targets as well as the underlying mechanisms of Xiaoji recipe against pancreatic cancer. A total of 32 active components and 522 potential targets of Xiaoji recipe were selected using the TCMSP and SwissTargetPrediction databases. The potential target gene prediction in pancreatic cancer was performed using OMIM, Disgenet, and Genecards databases, and totally, 998 target genes were obtained. The component-disease network was constructed using the Cytoscape software, and 116 shared targets of pancreatic cancer and Xiaoji recipe were screened out. As shown in the protein-protein interaction (PPI) network, the top 20 hub genes such as TP53, HRAS, AKT1, VEGFA, STAT3, EGFR, and SRC were further selected by degree. GO and KEGG functional enrichment analysis revealed that Xiaoji recipe may affect pancreatic cancer progression by targeting the PI3K/AKT and MAPK signaling pathways. Moreover, we performed in vitro assays to explore the effect of Xiaoji recipe on pancreatic cancer cells. The results revealed that Xiaoji recipe suppressed the viability and migration and promoted the apoptosis of pancreatic cancer cells via the inactivation of PI3K/AKT, MAPK, and STAT3 pathways. The findings of our study suggested the potential of Xiaoji recipe in the targeting therapy of pancreatic cancer.Entities:
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Year: 2022 PMID: 36118824 PMCID: PMC9477627 DOI: 10.1155/2022/4640849
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.809
Relation between potential targets and active components in Xiaoji recipe.
| Component name | Degree | Betweenness centrality | Closeness centrality | Eccentricity |
|---|---|---|---|---|
| Bisdemethoxycurcumin | 36 | 0.049102808 | 0.422096317 | 4 |
| Luteolin | 31 | 0.024267623 | 0.408219178 | 4 |
| Quercetin | 30 | 0.021502194 | 0.403794038 | 4 |
| Flavone | 30 | 0.029632826 | 0.412742382 | 4 |
| Beta-ecdysone | 27 | 0.02982601 | 0.40599455 | 4 |
| Physovenine | 22 | 0.016298752 | 0.38501292 | 4 |
| (4aS,6aR,6aS,6bR,8aR,10R,12aR,14bS)-10-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid | 18 | 0.011697317 | 0.37913486 | 4 |
| Pennogenin | 18 | 0.008901981 | 0.375314861 | 5 |
| ClematosideA′_qt | 17 | 0.010539948 | 0.37721519 | 4 |
| Picralinal | 16 | 0.007242384 | 0.373433584 | 4 |
| Rhein | 16 | 0.009358031 | 0.371571072 | 4 |
| Pennogenin VI | 16 | 0.006015765 | 0.371571072 | 5 |
| Pennogenin VII | 16 | 0.006015765 | 0.371571072 | 5 |
| 6,8-Dihydroxy-7-methoxyxanthone | 14 | 0.005718922 | 0.362530414 | 4 |
| Physciondiglucoside | 11 | 0.005127525 | 0.362530414 | 4 |
| Diosgenin | 10 | 0.002912114 | 0.357314149 | 5 |
| Beta-sitosterol | 9 | 0.011919371 | 0.355608592 | 4 |
| Polysaccharide | 9 | 0.003448702 | 0.347319347 | 5 |
| Hederagenin | 8 | 0.004162798 | 0.357314149 | 4 |
| Stigmasterol | 6 | 0.00185844 | 0.347319347 | 4 |
| Wenjine | 5 | 0.001187609 | 0.326039387 | 5 |
| Cholesterol | 5 | 0.005333285 | 0.344110855 | 4 |
| Embinin | 4 | 0.001738369 | 0.337868481 | 5 |
| Dioscin I | 4 | 3.06 | 0.333333333 | 5 |
| Dioscin II | 4 | 3.06 | 0.333333333 | 5 |
| Torachrysone-8-O-beta-D-(6′-oxayl)-glucoside | 3 | 2.64 | 0.334831461 | 5 |
| Heptyl phthalate | 3 | 7.37 | 0.336343115 | 4 |
| Pariphyllin | 3 | 1.43 | 0.328918322 | 5 |
Active ingredients of Xiaoji recipe.
| Mol ID | Molecule name | OB (%) | DL | Chinese medicinal materials |
|---|---|---|---|---|
| MOL000296 | Hederagenin | 36.91 | 0.75 |
|
| MOL000906 | Wenjine | 47.93 | 0.27 |
|
| MOL000940 | Bisdemethoxycurcumin | 77.38 | 0.26 |
|
| MOL013281 | 6,8-Dihydroxy-7-methoxyxanthone | 35.83 | 0.21 |
|
| MOL013287 | Physovenine | 106.21 | 0.19 |
|
| MOL013288 | Picralinal | 58.01 | 0.75 |
|
| MOL002259 | Physciondiglucoside | 41.65 | 0.63 |
|
| MOL002268 | Rhein | 47.07 | 0.28 |
|
| MOL002280 | Torachrysone-8-O-beta-D-(6′-oxayl)-glucoside | 43.02 | 0.74 |
|
| MOL000358 | Beta-sitosterol | 36.91 | 0.75 |
|
| MOL000492 | (+)-catechin | 54.83 | 0.24 |
|
| MOL000006 | Luteolin | 36.16 | 0.25 |
|
| MOL000098 | Quercetin | 46.43 | 0.28 |
|
| MOL001663 | (4aS,6aR,6aS,6bR,8aR,10R,12aR,14bS)-10-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid | 32.03 | 0.76 |
|
| MOL002372 | (6Z,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene | 33.55 | 0.42 |
|
| MOL000449 | Stigmasterol | 43.83 | 0.76 |
|
| MOL005594 | ClematosideA′_qt | 37.51 | 0.76 |
|
| MOL005598 | Embinin | 33.91 | 0.73 |
|
| MOL005603 | Heptyl phthalate | 42.26 | 0.31 |
|
| Dioscin I |
| |||
| Dioscin II |
| |||
| Diosgenin |
| |||
| Flavone |
| |||
| Pariphyllin |
| |||
| Pennogenin |
| |||
| Pennogenin VI |
| |||
| Pennogenin VII |
| |||
| Polysaccharide |
| |||
| Beta-ecdysone |
| |||
| Cholesterol |
| |||
| Flavacin |
| |||
| Hypoxanthine |
|
Active ingredients and their potential targets in Xiaoji recipe.
| Name | Ingredients ( | Predicted targets ( |
|---|---|---|
|
| 3 | 159 |
|
| 10 | 313 |
|
| 7 | 107 |
|
| 10 | 271 |
|
| 4 | 44 |
Figure 1Construction of the target gene network of pancreatic cancer and Xiaoji recipe. (a) The Venn diagram of potential targets of main active components in Xiaoji recipe and pancreatic cancer. (b) The component-disease target network.
Figure 2Construction of the PPI network and analysis of targets of Xiaoji recipe in pancreatic cancer. (a) The PPI network of 116 compound-disease target genes. (b) The topological analysis of the 116 compound-disease target genes.
Figure 3The analysis of compound-disease hub genes. (a) The top 30 genes from the PPI network based on the topological analysis. (b) The clustering analysis of the PPI network.
Figure 4GO analysis for biological process of component-disease targets.
Figure 5GO analysis for molecular function of component-disease targets.
Figure 6GO analysis for cellular component of component-disease targets.
Figure 7KEGG enrichment analysis of the Xiaoji recipe potential targets in pancreatic cancer.
Figure 8The related signaling pathways of component-disease targets. (a) The potential targets in MAPK signaling pathway. (b) The potential targets in PI3K/AKT signaling pathway.
Figure 9The effect of Xiaoji recipe on cell viability and migration in pancreatic cancer. (a) CCK-8 assays were used to evaluate the viability of CFPAC and PANC1 cells after the treatment of different concentrations of Xiaoji recipe. (b) The migration of CFPAC and PANC1 cells after indicated treatments was subject to wound healing assays. ∗∗p < 0.01.
Figure 10The effect of Xiaoji recipe on pancreatic cancer cell apoptosis. (a) The apoptosis rate of CFPAC and PANC1 cells after indicated treatments was subject to flow cytometry analysis.
Figure 11The effect of Xiaoji recipe on MAPK and PI3K/AKT signaling pathways. (a, b) The protein expression of AKT, STAT3, EGFR, and MAPK3 in CFPAC and PANC1 cells after indicated treatments.