| Literature DB >> 36118234 |
Kai-Yue Luo1,2,3, Chang-Lin Zhao1,2,3,4.
Abstract
Dead wood-associated fungi play an important role in wood degradation and the recycling of organic matter in the forest ecological system. Xenasmataceae is a cosmopolitan group of wood-rotting fungi that grows on tropical, subtropical, temperate, and boreal vegetation. In this study, a new fungal order, Xenasmatales, is introduced based on both morphology and multigene phylogeny to accommodate Xenasmataceae. According to the internal transcribed spacer and nuclear large subunit (ITS+nLSU) and nLSU-only analyses of 13 orders, Xenasmatales formed a single lineage and then grouped with orders Atheliales, Boletales, and Hymenochaetales. The ITS dataset revealed that the new taxon Xenasmatella nigroidea clustered into Xenasmatella and was closely grouped with Xenasmatella vaga. In the present study, Xenasmatella nigroidea collected from Southern China is proposed as a new taxon, based on a combination of morphology and phylogeny. Additionally, a key to the Xenasmatella worldwide is provided.Entities:
Keywords: ITS; LSU; Xenasmatales; Xenasmatella nigroidea; biodiversity; fungal systematics; new taxa; wood-decaying fungi
Year: 2022 PMID: 36118234 PMCID: PMC9470997 DOI: 10.3389/fmicb.2022.970731
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 6.064
The list of species, specimens, and GenBank accession numbers of sequences used in this study.
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| PV 10193 | – | AF506393 | Larsson et al., |
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| CBS 336.66 | MH858812 | MH870451 | Vu et al., |
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| TAA 149664 | AY463374 | AY586625 | Larsson et al., |
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| EL 1198 | – | AY586626 | Larsson et al., |
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| NH 8041 | – | AF506405 | Larsson and Larsson, |
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| NH 10396 | – | AY586696 | Larsson et al., |
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| EL 3395 | – | AF506375 | Larsson and Larsson, |
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| EL 1298 | AY463382 | AY586633 | Larsson et al., |
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| KHL 8490 | AY463383 | AY586634 | Larsson et al., |
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| Li 150909/19 | KX263721 | KX263723 | Unpublished |
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| AS 95 | – | EU118609 | Larsson, |
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| NH 8482 | EU118615 | – | Larsson, |
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| CBS 305.65 | – | MH870216 | Vu et al., |
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| EL 5997 | – | AY586644 | Larsson et al., |
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| KHL 11147 | – | AY586688 | Larsson et al., |
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| EL 9597 | AY463398 | AY586648 | Larsson et al., |
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| KHL 12474 | EU118619 | – | Larsson, |
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| NH 4208 | – | AY586650 | Larsson et al., |
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| KHL 12496 | EU118623 | – | Larsson, |
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| CBS 195.48 | MH856306 | MH867857 | Vu et al., |
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| Miettinen 20559 | MW191976 | MW159092 | Unpublished |
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| NH 14530 | AY463407 | AY586655 | Larsson et al., |
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| SL Lindberg 180317 | – | MT664783 | Unpublished |
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| KHL 11075 | – | AY586654 | Larsson et al., |
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| FCUG 1933 | – | AF310094 | Larsson and Hallenberg, |
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| KHL 11063 | AY463409 | AY586657 | Larsson et al., |
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| KUC 20131001-35 | – | KJ668382 | Unpublished |
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| 412 | – | AF352044 | Jarosch and Besl, |
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| 420526MF0827 | – | MG712372 | Unpublished |
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| EL 4299 | – | AY586659 | Larsson et al., |
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| EL 699 | AY463416 | AY586664 | Larsson et al., |
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| KHL 3663 | – | EU118630 | Larsson, |
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| KHL 8530 | AY463427 | AY586675 | Larsson et al., |
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| TW 704 | – | AF311018 | Wagner and Fischer, |
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| CBS 45950 | – | MH868226 | Vu et al., |
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| EL 1698 | – | AY463434 | Larsson et al., |
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| LL 98 | AY463435 | AY586682 | Larsson et al., |
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| KHL 8267 | – | AF506414 | Larsson and Larsson, |
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| CBS 18249 | – | MH868023 | Vu et al., |
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| SJ 98012 | EU118640 | EU118641 | Larsson, |
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| Dai 10670 | NR154112 | GU580886 | Cui et al., |
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| Hjm s.n. | EU118647 | – | Larsson, |
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| EL 1399 | – | AY586692 | Larsson et al., |
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| Hjm 18143 | – | EU118651 | Larsson, |
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| KHL 12054 | – | EU118653 | Larsson, |
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| TN 4008 | – | AF311026 | Wagner and Fischer, |
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| Nystroem 020830 | – | EU118655 | Larsson, |
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| CBS 66384 | – | MH873501 | Vu et al., |
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| WD 1839 | AB587634 | AB368101 | Sotome et al., |
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| KHL 11062 | AF347091 | – | Unpublished |
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| Dai 10726 | – | KT157839 | Wu et al., |
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| BN 99 | – | AY586701 | Larsson et al., |
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| LR 40885 | AY463456 | AY586702 | Larsson et al., |
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| AD 86033 | – | AY586710 | Larsson et al., |
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| SJ 93009 | AF506465 | AF506465 | Larsson and Larsson, |
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| WEI 17569 | – | MZ637283 | Chen et al., |
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| TAA 167982 | AY463467 | AY586713 | Larsson et al., |
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| MAFungi 12915 | – | JX310442 | Telleria et al., |
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| KHL 11849 | – | EU118667 | Larsson, |
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| KHL 11714 | – | DQ873653 | Larsson et al., |
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| NH 7960 | AF506479 | – | Larsson and Larsson, |
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| KHL 8459 | AY463472 | AY586718 | Larsson et al., |
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| CBS 279.28 | MH855012 | MH866480 | Vu et al., |
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| KHL 8793 | AF347089 | – | Larsson et al., |
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| MAFungi 79474 | – | JX392856 | Telleria et al., |
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| KHL 11079 | AY463478 | AY586722 | Larsson et al., |
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| HHB 13663 | – | KJ141191 | Unpublished |
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| HHB 8594 | – | HM536081 | Garcia-Sandoval et al., |
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| EL 199 | AY463482 | AY586725 | Larsson et al., |
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| KN 150311 | – | AF506489 | Larsson and Larsson, |
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| EL 3999 | AF347103 | – | Larsson et al., |
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| ACD 0185 | OM009268 | Unpublished | |
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| OTU 1299 | MT594801 | Unpublished | |
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| NLB 1571 | MT571671 | Unpublished | |
| NLB 1449 | MT537020 | Unpublished | ||
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| CLZhao 3895 | MN487105 | – | Huang et al., |
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| CLZhao 4839 | MN487106 | – | Huang et al., |
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| CBS 126045 | MH864060 | MH875515 | Vu et al., |
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| UC 2022974 | KP814210 | – | Rosenthal et al., |
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| UC 2023132 | KP814274 | – | Rosenthal et al., |
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| TASM YGG 26 | MT526341 | – | Gafforov et al., |
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| TASM YGG 36 | MT526342 | – | Gafforov et al., |
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| CLZhao 4149 | MW545958 | – | Zong and Zhao, |
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| CLZhao 8233 | MW545957 | – | Zong and Zhao, |
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| CLZhao 18300 | OK045679 | OK045677 | Present study |
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| CLZhao 18333 | OK045680 | OK045678 | Present study |
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| CLZhao 9156 | MT832954 | – | Zong et al., |
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| CLZhao 9847 | MT832953 | – | Zong et al., |
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| CLZhao 4528 | MT832960 | – | Zong et al., |
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| CLZhao 11258 | MT832959 | – | Zong et al., |
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| KHL 11065 | EU118660 | EU118661 | Larsson, |
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| BHI-F 160a | MF161185 | – | Haelewaters et al., |
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| CLZhao 4080 | MW545962 | – | Zong and Zhao, |
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| CLZhao 4308 | MW545963 | – | Zong and Zhao, |
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| CLZhao 2216 | MT832961 | – | Zong et al., |
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| CLZhao 2467 | MT832962 | – | Zong et al., |
Indicates type materials.
Figure 1A maximum parsimony strict consensus tree illustrating the phylogeny of the new order Xenasmatales and related order in the class Agaricomycetes based on ITS+nLSU sequences. The orders represented by each color are indicated in the upper left of the phylogenetic tree. Branches are labeled with a maximum likelihood bootstrap value ≥ 70%, and a parsimony bootstrap value ≥ 50, respectively.
Figure 2A maximum parsimony strict consensus tree illustrating the phylogeny of the new order Xenasmatales and related order in the class Agaricomycetes based on nLSU sequences. The orders represented by each color are indicated in the upper left of the phylogenetic tree. Branches are labeled with a maximum likelihood bootstrap value ≥ 70%, a parsimony bootstrap value ≥ 50%, and Bayesian posterior probabilities ≥ 0.95, respectively.
Figure 3A maximum parsimony strict consensus tree illustrating the phylogeny of a new species and related species in Xenasmatella and Xenasma based on ITS sequences. Branches are labeled with a maximum likelihood bootstrap value ≥ 70%, a parsimony bootstrap value ≥ 50%, and Bayesian posterior probabilities ≥ 0.95, respectively. The new species are in bold.
Figure 4Basidiomata of Xenasmatella nigroidea (holotype). Bars: (A) 1 cm; (B) 1 mm.
Figure 5Microscopic structures of Xenasmatella nigroidea (drawn from the holotype). (A) Basidiospores. (B) Basidia and basidioles. (C) A section of hymenium. Bars: (A) 5 μm; (B,C) 10 μm.
Morphological characteristics of the relevant orders used in this study.
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| Agaricales | Hymenophore type gilled, poroid, ridged, veined, spinose, papillate, and smooth; spore deposit color white, pink, brown, purple-brown and black | Fries, |
| Atheliales | Generally corticioid and athelioid, producing effused, crust like fruiting bodies that are loosely attached to the substrate and with non-differentiated margins | Eriksson et al., |
| Boletales | Includes conspicuous stipitate-pileate forms that mainly have tubular and sometimes lamellate hymenophores or intermediates that show transitions between the two types of hymenophores. Also includes gasteromycetes (puffball-like forms), resupinate or crust-like fungi that produce smooth, merulioid (wrinkled to warted), or hydnoid (toothed) hymenophores, and a single polypore-like species, | Gilbert, |
| Corticiales | Basidiomata resupinata, effuso-reflexa vel discoidea; hymenophora laevia; systema hypharum monomiticum; dendrohyphidia raro absentia; basidia saepe e probasidiis oriuntur. Cystidia presentia vel absentia. Sporae hyalinae, tenuitunicatae, albae vel aggregatae roseae. | Hibbett et al., |
| Gloeophyllales | Basidiomata annua vel perennia, resupinata, effuso-reflexa, dimidiata vel pileata; hymenophora laevia, merulioidea, odontioidea vel poroidea. Systema hypharum monomiticum, dimiticum vel trimiticum. Hyphae generativae fibulatae vel efibulatae. Leptocystidia ex trama in hymenium projecta, hyalina vel brunnea, tenuitunicata vel crassitunicata. Basidiosporae laeves, hyalinae, tenuitunicatae, ellipsoideae vel cylindricae vel allantoideae, inamyloideae. Lignum decompositum brunneum vel album. | Hibbett et al., |
| Gomphales | Basidiomata can be coralloid, unipileate or merismatoid (having a pileus divided into many smaller pilei); the pileus, if present, can be fan- to funnel-shaped | Gonzalez-Avila et al., |
| Hymenochaetales | Hymenial structure (corticioid, hydnoid or poroid) and basidiocarps (resupinate, pileate or stipitate); the main characters are the xanthochroic reaction, the lack of clamps, the frequent occurrence of setae | Tobias and Michael, |
| Thelephorales | Basidiospores tuberosae spinosaeque plus minusve coloratae | Oberwinkler, |
| Trechisporales | Basidiomata resupinata, stipitata vel clavarioidea. Hymenophora laevia, grandinioidea, hydnoidea vel poroidea. Systema hypharum monomiticum vel dimiticum. Hyphae fibulatae, septa hypharum interdum inflata (ampullata). Cystidia praesentia vel absentia. Basidia 4-6 sterigmata formantia. Sporae laeves vel ornatae. Species lignicolae vel terricolae. | Hibbett et al., |
| Xenasmatales | Basidiomata resupinate. Hyphal system monomitic, generative hyphae with clamp connections. Basidia pleural. Basidiospores colorless. | Present study |
Morphological characteristic comparison of Xenasmatella nigroidea and other species.
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| Thin, very hard to separate from substrate | Smooth, byssaceous to reticulate under the lens | 12–18 × 4.5–6 μm | Ellipsoid, 3.5–4.5 × 2.5–3.5 μm; asperulate with blunt spines up to 0.2 μm long | Present study |
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| Fragile | Smooth, pruinose to farinaceous or more or less reticulate | 6–7 × 4–4.5 μm | Ellipsoid, 6–7 × 4–4.5 μm; asperulate with blunt spines up to 1 μm long | Bernicchia and Gorjón, |
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| Thin, fragile | Porulose to reticulate or formed by radially arranged, white to pale yellowish white | 12–15 × 4–5 μm | Ellipsoid, 4.5–5.5 × 3–3.5 μm | Bernicchia and Gorjón, |
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| Small spots and becoming a closed coating, firmly attached | Resh smooth and somewhat gelatinous, light gray, dry waxy, white gray | 7–11 × 4–4.5 μm | Ellipsoid, 8–10 × 2–2.5 μm | Grosse-Brauckmann and Kummer, |
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| Cotton to flocculent | Cream to buff | 14–23.5 × 4–7 μm | Subglobose to globose, 3.3–4.4 × 2.8–4 μm | Zong and Zhao, |
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| Colliculosa | Ceraceo-membranacea | 17.5–20 × 4.5–5 μm | Ovale-ellipsoid, 2.5–3.5 μm | Ryvarden and Liberta, |
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| Presence of the rhizomorph | Clay-buff to cinnamon | 10.5–17.5 × 3.5–6.5 μm | Ellipsoid, 3.1–4.9 × 2.3–3.3 μm | Zong et al., |
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| Thin | White to grayish | 10–12 × 4–5 μm | Ellipsoid, 3.5–4.5 × 2–2.5 μm | Bernicchia and Gorjón, |
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| Detachable | Grandinioid | 15–20 × 5–6 μm | Ellipsoid, 5–5.5 × 4–4.5 μm | Bernicchia and Gorjón, |
Figure 6The geographic distribution of Xenasmataceae species (holotype) worldwide.
The geographic distribution and host-substratum of Xenasmataceae species (holotype).
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| Argentina | On fructifications of | Gómez, |
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| Primorye | On rotten trunk of | Parmasto, |
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| Réunion | On | Boidin and Gilles, |
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| Czech Republic | On fallen branch of | Pouzar, |
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| Ontario | On wood | Donk, |
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| Tunisia | On oak tree, bared and rotten | Donk, |
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| Austria | On rotten wood | Donk, |
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| Finland | On cracks in bark | Donk, |
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| Jammu-Kashmir | On log | Rattan, |
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| America | On very rotten wood | Höhnel and Litschauer, |
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| Khabarovsk | On fallen trunk of | Parmasto, |
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| Yunnan | On trunk of | Huang et al., |
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| Allier | Sur bois humides, aune, saule blane | Bourdot and Galzin, |
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| France | On decayed wood | Bourdot and Galzin, |
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| Japan | On rotten trunk of | Maekawa, |
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| Gabon | Among shrubs on shore | Boidin and Gilles, |
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| Norway | On rotten | Hjortstam and Larsson, |
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| Great Britain | On dead attached leaf of | Roberts, |
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| Kamchatka | On fallen branch of | Parmasto, |
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| Florida | On | Burdsall and Nakasone, |
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| Iran | On decayed wood | Hallenberg, |
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| Venezuela | On hardwood | Hjortstam and Ryvarden, |
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| Yunnan | On trunk of | Zong and Zhao, |
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| Ontario | On | Jackson, |
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| Ontario | On bark | Jackson, |
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| Reunion | Under Nastus borbonicus | Stalpers, |
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| Canary | On decayed wood | Ryvarden and Liberta, |
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| Venezuela | On palm | Hjortstam and Ryvarden, |
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| Yunnan | On trunk of | Zong et al., |
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| Sweden | On deciduous wood | Hjortstam, |
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| Czech Republic | On decayed wood | Svrcek, |
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| Sweden | On rotten wood of | Jülich, |
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| Yunnan | On trunk of | Zong et al., |
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| Italy | On | Stalpers, |
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| Yunnan | On trunk of | Zong and Zhao, |
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| Yunnan | On trunk of | Zong et al., |
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| France | On wood of | Boidin and Gilles, |
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| Massachusetts | On bark of | Jülich, |
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| Florida | On branch of | Gilbertson and Blackwell, |
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| Réunion | On dead branch | Boidin and Gilles, |
Key to 25 accepted species of Xenasmatella worldwide.
| 1. Gloeocystidia present |
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| 1. Cystidia absent | 2 |
| 2. Basidia with 2, 3 sterigmata |
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| 2. Basidia with 4 sterigmata | 3 |
| 3. Basidia sterigmata > 5 μm in length |
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| 3. Basidia sterigmata < 5 μm in length | 4 |
| 4. Basidiospores > 5 μm in length | 5 |
| 4. Basidiospores < 5 μm in length | 12 |
| 5. Basidiospores > 4 μm in width | 6 |
| 5. Basidiospores < 4 μm in width | 9 |
| 6. Basidiospores globose |
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| 6. Basidiospores ellipsoid | 7 |
| 7. Basidia < 6 μm in width |
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| 7. Basidia > 6 μm in width | 8 |
| 8. Growth on dead angiosperm |
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| 8. Growth on the trunk of gymnosperm |
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| 9. Basidiospores < 2 μm in width |
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| 9. Basidiospores > 2 μm in width | 10 |
| 10. Hymenial margin with fimbriae |
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| 10. Hymenial margin without fimbriae | 11 |
| 11. Hymenial surface arachnoid or byssoid |
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| 11. Hymenial surface smooth |
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| 12. Basidiospores subglobose to globose | 13 |
| 12. Basidiospores ellipsoid to subcylindrical | 17 |
| 13. Basidiospores thick-walled |
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| 13. Basidiospores thin-walled | 14 |
| 14. Hymenial surface clay-pink to saffron |
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| 14. Hymenial surface white to grayish or cream to buff | 15 |
| 15. Generative hyphae thick-walled, unbranched |
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| 15. Generative hyphae thin-walled, branched | 16 |
| 16. Hymenial surface gossypine to byssaceous |
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| 16. Hymenial surface pruinose to farinaceous |
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| 17. Generative hyphae thick-walled | 18 |
| 17. Generative hyphae thin-walled | 19 |
| 18. Hymenial surface gray to black |
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| 18. Hymenial surface clay-buff to cinnamon |
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| 19. Growth on palm |
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| 19. Growth on other plant | 20 |
| 20. Growth on the bark of magnolia |
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| 20. Growth on other wood | 21 |
| 21. Basidiospores slightly thick-walled |
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| 21. Basidiospores thin-walled | 22 |
| 22. Basidia barrel-shaped |
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| 22. Basidia cylindrical | 23 |
| 23. Basidiomata ochreous |
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| 23. Basidiomata white to gray | 24 |
| 24. Basidiospores > 3 μm in width |
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| 24. Basidiospores < 3 μm in width |
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