A Dominic Fortes1, Stewart F Parker1. 1. ISIS Neutron and Muon Facility, STFC Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Chilton, Oxfordshire OX11 0QX, U.K.
Abstract
We have re-investigated the structure and vibrational spectroscopy of the iconic molecule iron pentacarbonyl, Fe(CO)5, in the solid state by neutron scattering methods. In addition to the known C2/c structure, we find that Fe(CO)5 undergoes a displacive ferroelastic phase transition at 105 K to a P1̅ structure. We propose that this is a result of certain intermolecular contacts becoming shorter than the sum of the van der Waals radii, resulting in an increased contribution of electrostatic repulsion to these interactions; this is manifested as a strain that breaks the symmetry of the crystal. Evaluation of the strain in a triclinic crystal required a description of the spontaneous strain in terms of a second-rank tensor, something that is feasible with high-precision powder diffraction data but practically very difficult using strain gauges on a single crystal of such low symmetry. The use of neutron vibrational spectroscopy (which is not subject to selection rules) has allowed the observation of all the fundamentals below 700 cm-1 for the first time. This has resulted in the re-assignment of several of the modes. Surprisingly, density functional theory calculations that were carried out to support the spectral assignments provided a poor description of the spectra.
We have re-investigated the structure and vibrational spectroscopy of the iconic molecule iron pentacarbonyl, Fe(CO)5, in the solid state by neutron scattering methods. In addition to the known C2/c structure, we find that Fe(CO)5 undergoes a displacive ferroelastic phase transition at 105 K to a P1̅ structure. We propose that this is a result of certain intermolecular contacts becoming shorter than the sum of the van der Waals radii, resulting in an increased contribution of electrostatic repulsion to these interactions; this is manifested as a strain that breaks the symmetry of the crystal. Evaluation of the strain in a triclinic crystal required a description of the spontaneous strain in terms of a second-rank tensor, something that is feasible with high-precision powder diffraction data but practically very difficult using strain gauges on a single crystal of such low symmetry. The use of neutron vibrational spectroscopy (which is not subject to selection rules) has allowed the observation of all the fundamentals below 700 cm-1 for the first time. This has resulted in the re-assignment of several of the modes. Surprisingly, density functional theory calculations that were carried out to support the spectral assignments provided a poor description of the spectra.
Iron pentacarbonyl, Fe(CO)5, is one of the iconic molecules
of inorganic chemistry. It was first reported in 1891[1] and was only the second metal carbonyl to be discovered.
While the stoichiometry was determined in the original report,[1] the structure was vigorously debated for many
years as to whether it was a trigonal bipyramid, D3h, or a square-based pyramid, C4v.[2] The debate was apparently resolved
in 1939 by a gas-phase electron diffraction (GED) structural determination[2] that favored the D3h structure. However, the C4v structure
was still being proposed as late as 1958.[3] Only after the crystal structure was reported[4] was the debate concluded. Subsequent X-ray structure determinations[5−8] have corrected the space group (to C2/c from Cc(4)) and show an
(almost) D3h Fe(CO)5 occupying
a site of symmetry C2.The unusual
symmetry has also meant that the vibrational spectroscopy
of Fe(CO)5 has been extensively investigated since the
1950s.[9−17] The most comprehensive study was carried out by Jones et al.[16] who measured the infrared spectra of the 12C16O, 13C16O, and 12C18O isotopomers. Combined with the best Raman data available
at the time, they derived a complete force field. Gas phase studies
have the advantage that the selection rules are generally rigorously
obeyed, so making assignments easier. The disadvantage is that modes
that are forbidden in both the infrared and Raman spectra are unobservable. D3h Fe(CO)5 has one such mode, and
this had to be deduced from overtone and combination bands.Most studies have been of the gas or liquid phase, with comparatively
few of the solid state.[13−15] In the solid state, the low crystal
symmetry results in, formally, all the modes being allowed in both
the infrared and Raman spectra. In practice, such modes are generally
weak and difficult to distinguish from overtone and combination bands.To overcome the uncertainty in the assignments, there have been
many computational studies of Fe(CO)5.[18−21] To date, these have all used
the isolated molecule, that is, a gas phase approximation. We are
unaware of any calculations of the solid-state vibrational spectra.Inelastic neutron scattering (INS) spectroscopy[22] offers an alternative approach. INS is a complementary
form of vibrational spectroscopy, whose major advantage for the study
of metal carbonyls is that there are no selection rules and all the
modes are, in principle, observable. In practice, the resolution in
the C≡O stretch region is insufficient to resolve the modes;
however, this is the region that has been the most comprehensively
studied by infrared and Raman spectroscopies. In the metal carbonyl
stretch and deformation region below 800 cm–1, the
modes are easily resolved. Crucially, this is the region where the
infrared and Raman forbidden mode occurs. This method was used to
observe all the modes in this region (including the forbidden ones)
for the metal hexacarbonyls, M(CO)6, M = Cr, Mo, and W.[23] The assignments were supported by periodic density
functional theory (periodic-DFT) calculations of the solid-state structure.In this work, we have determined the solid-state structure by neutron
powder diffraction between 10 and 240 K; the melting point is at 252
K. This work revealed a hitherto unknown phase transition at ∼105
K from the C2/c phase to a P1̅ phase. We note that all the spectroscopic data
is from the 1970s or earlier. To update and complement this, we have
measured the INS spectra in both phases and recorded Raman spectra
in the range 7–300 K, encompassing both solid-state phases
and the liquid state. Infrared spectra of the C2/c phase and the liquid were measured from 50 cm–1.
Results and Discussion
Neutron Powder Diffraction
Structural models of Fe(CO)5 obtained by Rietveld refinement of neutron powder diffraction
data measured at 200 and 110 K are in good agreement with the most
recent X-ray single-crystal diffraction results[7,8] (Table ). We find that the
axial Fe–C and C–O lengths are indeed longer and shorter,
respectively, than the equivalent equatorial values with little evidence
of any significant changes on cooling from 200 to 110 K. However,
a splitting of the Bragg peaks in the powder diffraction patterns
was observed between 110 and 100 K (Figure ), indicative of a structural change with
a reduction of the crystal’s symmetry from monoclinic to triclinic.
There have been no prior reports of a low-temperature phase transformation
in Fe(CO)5, and the heat capacity data that extend down
to 22.59 K exhibit no significant anomalies.[24] Similarly, the most recent single-crystal study[8] was carried out at 100 K, just below the temperature at
which we observe the transition. These authors reported residual features
in their Fourier difference maps that required the implementation
of an anharmonic model of the atomic displacements, but otherwise
nothing untoward was noted.
Table 1
Comparison of Intramolecular Bond
Lengths in Fe(CO)5 Phase I between Our Work and Values
Reported in the Literature
200 Ka
200 K[6]
198 K[7]
110 Ka
100 K[8]
C1–O1
1.156(2)
1.129(8)
1.136(2)
1.147(2)
1.1451(5)
C2–O2
1.111(1)
1.126(9)
1.117(2)
1.122(2)
1.1387(5)
C3–O3
1.131(2)
1.17(2)
1.128(4)
1.130(2)
1.1444(9)
Fe1–C1
1.809(2)
1.805(7)
1.804(3)
1.807(2)
1.8131(3)
Fe1–C2
1.824(1)
1.805(7)
1.811(2)
1.823(1)
1.8187(3)
Fe1–C3
1.814(2)
1.76(1)
1.801(3)
1.816(2)
1.8098(5)
This work.
Figure 1
Stack plot of neutron powder diffraction data
collected on warming
from 10 to 240 K, illustrating the splitting of one of the Bragg peaks
below 110 K due to the C2/c ↔ P1̅ phase transition.
Stack plot of neutron powder diffraction data
collected on warming
from 10 to 240 K, illustrating the splitting of one of the Bragg peaks
below 110 K due to the C2/c ↔ P1̅ phase transition.This work.Since the observed transition was apparently displacive
in nature,
with only a lowering of the molecular site symmetry from C2 down to C1, it proved straightforward
to derive a structural model of the low-temperature phase and carry
out refinements against the neutron powder diffraction data measured
at 100 and 10 K. The results of these refinements are reported in
the Supporting Information using the P1̅ cell, but for the purposes of continuity in describing
the temperature dependence of the unit-cell parameters, we otherwise
adopt the nonprimitive c-face-centered triclinic
space group, C1̅, to characterize the low-temperature
behavior. Neutron powder diffraction patterns and fitted profile refinements
at 10 K and 200 K are depicted in Figures S1 and S2, respectively.The unit-cell parameters of the C2/c and C1̅ phases
are tabulated in Table S1 and plotted in Figure . Inflections in
the temperature dependence
of these parameters are evident at ∼105 K but are not propagated
to the unit-cell volume (Figure ), where no discontinuity or inflection can be observed.
The transition is found to be reversible and reproducible, being observed
at the same temperature on cooling and in two separate sequences of
data collected on warming with no significant hysteresis.
Figure 2
Unit-cell parameters
of Fe(CO)5 as a function temperature:
(a) a-axis length; (b) b-axis length;
(c) c-axis length; (d) interaxial angle α;
(e) interaxial angle β; and (f) interaxial angle γ. The
solid lines are polynomials fitted to the data above the phase transition
and extrapolated 30 K below the transition.
Figure 3
Unit-cell volume of Fe(CO)5 as a function temperature.
The solid red line represents a Debye-type model of the thermal expansion
fitted to the data (see Supplementary Methods).
Unit-cell parameters
of Fe(CO)5 as a function temperature:
(a) a-axis length; (b) b-axis length;
(c) c-axis length; (d) interaxial angle α;
(e) interaxial angle β; and (f) interaxial angle γ. The
solid lines are polynomials fitted to the data above the phase transition
and extrapolated 30 K below the transition.Unit-cell volume of Fe(CO)5 as a function temperature.
The solid red line represents a Debye-type model of the thermal expansion
fitted to the data (see Supplementary Methods).The distortion of the unit cell due to the C2/c → C1̅
transition, independent
of the effect due to changes in temperature, is described as a spontaneous
strain, εS.[25] This strain
is a symmetrical second-rank tensor with six independent elements
(e), derived from the unit-cell parameters
of the high- and low-temperature phases at any given datum.[26] Clearly, due to the transition, the unit-cell
parameters of the high-temperature phase cannot be measured in the
region of stability of the low-temperature phase and must be obtained
by extrapolation. Fortunately, there are data over a sufficiently
wide range of temperatures above the transition for a simple quadratic
polynomial expression to be fitted, which may then be extrapolated
a few tens of degrees below the transition without introducing significant
artifacts. These polynomial fits, and their extrapolations, are shown
in Figure ; the fit
parameters are listed in Table S2. From
the resulting spontaneous strain tensors, we find that the nonsymmetry-breaking
strains (ensb), e11, e22, e33, and e13, exhibit a small but linear dependence on temperature,
whereas the symmetry-breaking shear strains (esb), e12 and e23, display a much larger T1/2 dependence on temperature below the phase transition
(Figure S3).Standard matrix decomposition
methods are applied to obtain the
eigenvalues and eigenvectors of the spontaneous strain tensor.[27] These constitute the principal tensile strains,
e1, e2 and e3, along three orthogonal
axes of the strain ellipsoid and the orientation of the ellipsoid
with respect to the original crystallographic reference frame. Figure shows that e1 and e3 vary with T1/2 below the transition and are almost perfectly symmetrical, with
e2 ≈ 0 at all T.
Figure 4
Principal elements of
the spontaneous strain tensor fitted with
a model assuming thermodynamically second-order behavior (solid lines).
Principal elements of
the spontaneous strain tensor fitted with
a model assuming thermodynamically second-order behavior (solid lines).The temperature dependence of these terms is typically
described
using Landau theory, in which the strain is related to one or more
transition-driving order parameters (Q) that are
representative of the thermodynamic character of the transition.[28] For a thermodynamically second-order phase transition,
ε ∝ Q ∝ (TC – T)1/2, where TC is the critical temperature of the transition.
A least-squares fit of the equation e = x(TC – T)1/2 to e1 and e3 in the
range 70–100 K yields TC = 104.5(1)
K from e1 and 104.8(2) K from e3. Both strains
have a near identical degree of coupling to the order parameter: x1 = 1.07(1) × 10–5 and x3 = 1.02(1) × 10–5.Figure shows a
tensor representation surface[29] computed
from the e at 75 K and depicted in relation
to the structure of Fe(CO)5: lobes colored in green indicate
positive tensile strain (expansion) and lobes colored in red connote
negative strain (contraction). This arrangement leads to planes of
pure shear between the lobes. Alternative views of the representation
surface, including comparisons with the thermal expansion tensors,
are provided in Figures S4 and S9.
Figure 5
Spatial relationship
between the spontaneous strain tensor’s
representation surface (lobate figure, centrally positioned) and the
local molecular environment. Symmetry codes: (i) x, y, z; (ii) −x, y, 1/2 – z; (iii) 1/2
+ x, 1/2 – y, 1/2 + z. Tensor drawn using WinTensor.[30]
Spatial relationship
between the spontaneous strain tensor’s
representation surface (lobate figure, centrally positioned) and the
local molecular environment. Symmetry codes: (i) x, y, z; (ii) −x, y, 1/2 – z; (iii) 1/2
+ x, 1/2 – y, 1/2 + z. Tensor drawn using WinTensor.[30]An alternative evaluation of the symmetry-breaking
strains may
be obtained without recourse to extrapolation. As described by Salje,[31] when the change in β is small, then e12 is simply proportional to cos(γ) and e23 ∝ cos(α*). In this instance, we would therefore expect
cos2(α*) to exhibit a linear temperature dependence,
which Figure S5 shows to be the case, with
an a-axis intercept = 104.6(3) K. Similarly, for
the situation where e12 and e23 are driven by
a single order parameter, then we should expect a linear relationship
between cos(γ) and cos(α*): Figure S5b confirms this.In order to interpret the origin of
the phase transition, we must
characterize the intermolecular distances and interactions. We first
employ Hirschfeld surfaces[32] and their
related two-dimensional fingerprint plots[33] to examine the spatial relationships: these have been computed for
Fe(CO)5 from the crystal structures determined at 10, 100,
110, and 200 K using CrystalExplorer 17.5.[34] The distance from a point on the Hirschfeld surface to the nearest
nuclei inside the surface, di, and the
distance to the nearest external nucleus, de, is plotted in Figure S6, with colors
indicating the proportion of the Hirschfeld surface area at a given
distance. We observe that the interactions are dominated by O···O
contacts (>50% of the surface area), followed by C···O
and O···C contacts. The area devoted to the latter
increases only slightly on cooling, at the expense of the area due
to O···O interactions. Qualitatively, the distribution
of distances becomes less diffuse on cooling; it is particularly apparent
that the distributions of all intermolecular interactions are considerably
sharper at 10 K than at 200 K. Nevertheless, these changes appear
to vary linearly with temperature and do not exhibit a clear signature
of the phase transition.It is useful also to examine the quantity dnorm, in which both di and de are normalized
by the van der Waals radii for a given pair of atoms and then summed.
Hence, for any point on the Hirschfeld surface, a positive value of dnorm indicates intermolecular contacts that
are longer than the sum of the van der Waals radii and negative values
indicate contacts shorter than the van der Waals (vdW) sum. The Hirschfeld
surfaces at 10 and 200 K are shown in Figure , shaded by dnorm with positive values in blue and negative values in red. Several
contacts become shorter than the van der Waals sum on cooling, with
distinct red patches appearing on the Hirschfeld surface. For completeness,
Hirschfeld surfaces computed at all four temperatures are provided
in Figure S7.
Figure 6
Hirschfeld surfaces at
10 and 200 K, shaded by dnorm with positive
values in blue and negative values
in red. The molecular pairs illustrated correspond with the “strong”
interactions between molecules “0” and “2”
shown in Figure S8a, for which the high
relative contribution of exchange-repulsion energy is tabulated in Tables S3 and S5. Note that only the symmetry
inequivalent atoms are labeled.
Hirschfeld surfaces at
10 and 200 K, shaded by dnorm with positive
values in blue and negative values
in red. The molecular pairs illustrated correspond with the “strong”
interactions between molecules “0” and “2”
shown in Figure S8a, for which the high
relative contribution of exchange-repulsion energy is tabulated in Tables S3 and S5. Note that only the symmetry
inequivalent atoms are labeled.A plot of the minimum values of dnorm on the Hirschfeld surface as a function of temperature
(Figure ) reveals
that the
parameter turns negative very close to the ferroelastic TC at ∼105 K. Effectively, the transition occurs
when certain interatomic contacts become shorter than their van der
Waals sum. Comparing Figures and 5, one can observe that these
shortened interactions are operating between the carbonyl group labeled
C1–O1 (x, y, z) and C2–O2 (x + 1/2, −y + 1/2, z + 1/2) and their reciprocal pair, C2–O2
(x, y, z) and C1–O1
(x + 1/2, −y + 1/2, z + 1/2). The vectors between these groups correspond with
the direction of greatest positive spontaneous strain, e3.
Figure 7
Minimum values of dnorm on the Hirschfeld
surface as a function of temperature.
Minimum values of dnorm on the Hirschfeld
surface as a function of temperature.We next consider the pairwise interaction energies,
which are also
obtained using CrystalExplorer 17.5 from wavefunctions computed at
the B3LYP-D2/6-31G(d,p) level of theory.[35] Each iron pentacarbonyl molecule participates in a range of different
interactions, illustrated in Figure S8,
three of which have a large stabilizing effect (i.e., larger negative
total energy, Etot) with the remaining
three being substantially weaker (Table S3). Of the three stronger interactions, it is that with the second
nearest neighbor that is of interest from our analysis of the intermolecular
distances (cf., Figure ). Tables S4–S6 show how the individual
contributions to the energies of the three strongest interactions
vary with temperature, including the ratio of the exchange-repulsion
energy (Erep) to the dispersion energy
(Edis) It is clear, even at 200 K, that
the repulsion energy is relatively strong for the second nearest neighbor
interaction, approaching equivalence with the dispersion energy at
10 K, which is in striking contrast with the behavior of the other
two types of near-neighbor contacts. Furthermore, the repulsion energy
appears to drop slightly at the transition, potentially indicating
a relief of the strain at the onset of the transition due to the growing
repulsion, although it would be beneficial in hindsight to obtain
more narrowly spaced structure refinements to confirm this effect.
Additionally, the total energy of this interaction becomes less negative
as the temperature decreases (Etot increases
on cooling for the other interactions), showing that this particular
interaction becomes less stabilizing in nature.We interpret
these results as follows: the distance between Fe(CO)5 molecules
shrinks by virtue of thermal contraction, with
a degree of anisotropy (Figure S9). As
a result, certain intermolecular contacts become shorter than their
vdW radii sum, resulting in rising electrostatic repulsion; the relative
contribution of this repulsive force is apparently sufficient above
some critical threshold to generate a strain that breaks the symmetry
of the crystal. Hence, we interpret the displacive ferroelastic transition
as being likely due to van der Waals strain. Since the repulsion increases
continuously, the enthalpy of the crystal also varies continuously,
which conforms with the second-order nature of the transition. The
lack of any apparent signature of the phase transition in the heat
capacity data[24] shows that any change in
the temperature dependence of the enthalpy must be rather small.
Vibrational Spectroscopy
In the gas phase, the D3h symmetry of Fe(CO)5 results in
four C≡O stretch modes [2′ (ν1, ν2), ″ (ν6), ′ (ν10)], four Fe–CO stretch modes [2′ (ν3, ν4), ″ (ν8), ′ (ν13)], six Fe–C≡O bending modes [′ (ν5), ″ (ν7), 2′ (ν11, ν12), 2″ (ν16, ν17)], and four OC–Fe–CO bending modes [″, (ν9), 2′, (ν14, ν15), ″ (ν18)] (counting doubly degenerate modes, i.e., ′ and ″, as a single mode. The mode numbering
is that of Bigorgne[14] and Jones et al.[16]). ″ and ′ are infrared-allowed; ′, ′, and ″ are Raman-allowed and ′ is inactive in both the infrared and Raman spectra. In the solid
state, the usual approach is the correlation method;[36] however, the low site symmetry of C2 and C1 in the C2/c and P1̅ phases, respectively,
means that all degeneracies are lifted and all modes are allowed.
The presence of two molecules in the primitive cell of each phase
results in every mode having an in-phase and an out-of-phase combination,
one of which is infrared-allowed and one Raman-allowed. Thus, the
selection rules are the same in both phases. Note that all modes are
allowed in the INS in both phases. Our structural study shows that
the molecular structure is essentially the same in both phases; see Table S8. Consequently, the spectra in both phases
look very similar, and this explains why previous spectroscopic studies
did not detect the phase change.Figure shows the vibrational spectra of Fe(CO)5 in the liquid and two solid phases, and the observed bands
are given in Table . We defer a detailed assignment of the spectra to the next section,
where we support these with periodic-DFT calculations. However, several
points are worth noting.
Figure 8
Vibrational spectra of Fe(CO)5. Top:
liquid at room
temperature, middle: solid, phase I (INS and 532 nm Raman at 120 K,
infrared at 197 K), bottom: solid, phase II at 20 K.
Table 2
Observed Bands of Fe(CO)5 (cm–1) and Their Assignmentsa
liquid
at RT
phase I
phase II
assign
infrared
infrared
CCl4 sol’n
FT-Raman
infrared
(197 K)
Raman (120
K)
INS (120
K)
Raman (20
K)
INS (10 K)
2114
2116 m
2117 m
ν1
2028
2021 vs
2021 vs
ν2
2020
ν6
1989
1985
1997 m
1997 m
ν10
1969 s
1967 s
ν10
1947 vw
1946 vw
756 vw
752 vw
2 × ν5
753 vw
2 × ν5
656 vw
647 w,br
657 vw
655 w
ν7
630
639
637 w
ν7
605
613
602 vs
612 m
613 m
ν11
557
557
557
556 w
559 w
556 s
559 w
556 s
ν12
488
493 w
490 sh
496 w
492 sh
487 sh
489 w
474
476
473 m
476 s
478 s
ν13
443
447 w
447 s
447 w
447 s
ν3 and
ν16
425
431
416
430 m
422 vs
418 s
423 vs
419 s
ν4
378
376 vw
375 s
378 vw
375 vs
ν5 and
ν17
128 m
132 sh
130 m
129 m
ν18
122 m
ν18
116 s
115 m
114 m
ν14
108
106
110 sh
110 s, br
110 sh
107 m
ν14
89w
78
78 m
78 m
81 m
84 m
ν15
72
71 m
74 m
72 m,br
ν9
61 sh
66 w
62 w
59 sh
lattice mode
54 w
lattice mode
41 vs,br
45 m,br
lattice
mode
s = strong, m = medium, w = weak,
v = very, br = broad, sh = shoulder.
Vibrational spectra of Fe(CO)5. Top:
liquid at room
temperature, middle: solid, phase I (INS and 532 nm Raman at 120 K,
infrared at 197 K), bottom: solid, phase II at 20 K.s = strong, m = medium, w = weak,
v = very, br = broad, sh = shoulder.In the 300–700 cm–1 region,
there are
10 modes. In the INS spectrum of phase II, there are only seven modes
apparent. As all modes are allowed and must be present, it immediately
follows that there are three accidental degeneracies.In the
region below 200 cm–1, in addition to
the four OC–Fe–CO bending modes, there are six librational,
three optic translational, and three acoustic translational modes.
This results in the dense manifold of modes seen in the INS spectra.
As the translations require the entire molecule to move, these are
likely to form the lowest energy feature, with the librations (which
only involve the carbonyl ligands moving) largely comprising the middle
feature and the internal modes forming the intense, broad feature
centered at 120 cm–1. The width of the features
would suggest that there is significant vibrational dispersion present
(variation of transition energy with wavevector; INS is sensitive
to all wavevectors, in contrast to infrared and Raman spectroscopy
that are seen at zero wavevector). This is noticeably distinct from
the 300–700 cm–1 region, where the bands
are nearly resolution-limited, indicating almost no dispersion is
present.
Computational Studies and Assignment of the Spectra
Comparison of an experimental INS spectrum with that generated from
a DFT calculation is a well-established method for the assignment
of vibrational spectra.[22] It was used to
assign the solid-state spectra of the metal hexacarbonyls, M(CO)6, M = Cr, Mo, W.[23] The agreement
between observed and calculated spectra was very good and enabled
unambiguous assignments to be made. Our expectation was that the same
would also be true for Fe(CO)5. As Figure shows, this is not the case.
Figure 9
Comparison of observed
and calculated (from DFT) spectra of Fe(CO)5. (a) Experimental
spectrum at 20 K (phase II), (b) CASTEPv17
GGA (PBE, TS, OTFG), (c) CASTEPv17 LDA (CA-PZ, OBS, OTFG), (d) CASTEPv17
GGA (PBE, TS, OPIUM), (e) CASTEPv20 GGA (rSCAN, OTFG), (f) DMol3 (BLYP,
DNP), (g) DMol3 (SCAN, DNP), and (h) Gaussian09 (B3LYP, aug-ccVTZ).
See the Computational Studies section of the Experimental section
for the definition of the acronyms.
Comparison of observed
and calculated (from DFT) spectra of Fe(CO)5. (a) Experimental
spectrum at 20 K (phase II), (b) CASTEPv17
GGA (PBE, TS, OTFG), (c) CASTEPv17 LDA (CA-PZ, OBS, OTFG), (d) CASTEPv17
GGA (PBE, TS, OPIUM), (e) CASTEPv20 GGA (rSCAN, OTFG), (f) DMol3 (BLYP,
DNP), (g) DMol3 (SCAN, DNP), and (h) Gaussian09 (B3LYP, aug-ccVTZ).
See the Computational Studies section of the Experimental section
for the definition of the acronyms.The calculations used a variety of methods and
programs. CASTEP
(Figure b–e)
is a periodic method that uses plane-waves, DMol3 (Figure f,g) was used in its periodic
implementation with atom centered orbitals, and Gaussian09 (Figure h) is an isolated
molecule calculation that uses atom centered orbitals. The calculated
geometry (Table S2) generally showed good
agreement with the experimental data. Several different functionals
and types of pseudopotential were used, and it is apparent that none
are completely satisfactory.However, there are common features
between the calculations, and
together with our new data, this is sufficient for a definitive assignment
of the solid-state spectra of Fe(CO)5.Table summarizes
the previous assignments. In the C≡O stretch region, there
is general agreement on the assignments. In the gas and liquid phases,
three Raman bands and two infrared bands are expected and observed.
The selection rules make the assignments straightforward. The two
polarized bands in the Raman that do not have infrared counterparts
are the A1′ modes ν1 and ν2; the infrared band without a Raman counterpart is the A2″ mode ν6 and the lowest energy mode that occurs
in both the infrared and Raman spectra is the E′ mode ν10. In the solid state, four
strong bands are seen in the Raman spectrum. The two highest energy
bands are the A1′ modes; the lowest pair were assigned
as the E′ mode with the degeneracy
lifted by the crystal symmetry.[15] The calculations
support this interpretation. The possibility that one of the modes
is the Raman-allowed component of the gas phase A2″ infrared-only
mode that has become active in the solid state can be discounted because
the calculated intensity is very low.
Table 3
Fe(CO)5 Assignments (cm–1)
sym
mode no.
description
Edgell[13]
Bigorgne[14]
Catalotti[15]
Jones[16]
Delley[18]
Jonas[19]
Schaefer[20]
this work
Expt.
Expt.
Expt.
Expt.
Calc.a
Calc.b
Calc.c
gas
liquid
solid
gas
solid
A1′
ν1
ν(C≡O)
2117
2116
2115
2121
2072
2090
2169
2117
A1′
ν2
ν(C≡O)
1984
2030
2033
2042
1991
2012
2093
2021
A1′
ν3
ν(Fe–CO)
414
418
410
443
441
453
439
447
A1′
ν4
ν(Fe–CO)
377
381
440
413
419
428
413
419
A2′
ν5
δ(Fe–C≡O)
379
593
383
349
361
364
375
A2″
ν6
ν(C≡O)
2014
2022
2003
2034
1989
2011
2094
2020
A2″
ν7
δ(Fe–C≡O)
620
615
623
619
610
621
617
655/637
A2″
ν8
ν(Fe–CO)
474
430
433
429
480
485
473
427
A2″
ν9
δ(OC–Fe–CO)
72
[100]e
105
104
107
72
E′
ν10
ν(C≡O)
2034
2000
1980
2013
1974
1990
2067
1997
E′
ν11
δ(Fe–C≡O)
646
642
643
645
646
657
660
613
E′
ν12
δ(Fe–C≡O)
544
553
558
542
479
489
483
556
E′
ν13
ν(Fe–CO)
431
475
480
474
424
436
439
478
E′
ν14
δ(OC–Fe–CO)
104
114
105
103
100
104
106
E′
ν15
δ(OC–Fe–CO)
68
64
[74]e
54
50
54
84
E″
ν16
δ(Fe–C≡O)
752
488
487
488
539
552
563
447
E″
ν17
δ(Fe–C≡O)
492
448
614
[375]e
363
374
366
375
E″
ν18
δ(OC–Fe–CO)
95
130d
[97]e
94
93
95
129/122
B88-LYP with a double numerical
basis set.
BP86 with an
ECP2 basis set.
B3LYP with
a double-ζ plus
polarization (DZP) basis set.
Solid state.
Estimated
from combination bands.
B88-LYP with a double numerical
basis set.BP86 with an
ECP2 basis set.B3LYP with
a double-ζ plus
polarization (DZP) basis set.Solid state.Estimated
from combination bands.The assignment of the 10 modes in the 300–700
cm–1 region has been controversial. Table lists the assignments, and
it can be seen that there
are significant disagreements. The assignments fall into two camps:
those based on experimental work[13−16] and those based on computational
studies.[18−20] There is general agreement within each group, except
for the assignments of Edgell,[13] which
were based on incomplete data. The computational studies reversed
several assignments, for example, ν8 and ν13 and ν12 and ν16, but these
were done largely to obtain better agreement with the experimental
data. As we have demonstrated in Figure , computational studies provide a poor description
of the experimental spectra.Some of the difficulties arise
because the selection rules are
less helpful than expected. These only predict whether a mode is infrared-
or Raman-allowed but have nothing to say about its intensity. A mode
may be allowed but have negligible intensity and this is the case
with several modes here. The presence of accidental degeneracies further
complicates the problem.Two modes for which symmetry does deliver
clear evidence are ν3 (A1′) and ν12 (E′). Polarization measurements[12,14,16] show the intense Raman line at
416 cm–1 to be strongly polarized, so it must be
an A1′ mode, that is, ν3. The band at 556
cm–1 is clearly present in both the infrared and
Raman spectra of the
liquid, so it must be an E′ mode.The
calculations do provide some useful information. All the calculations
predict the “forbidden” mode ν5 to
be close in energy to the E″ mode
ν17 and both to be ∼380 cm–1. To a first approximation, the INS intensity of an E mode will be twice that of an A mode for the same
type of motion. This is seen in Figure b–d, and it is apparent that to account for
the intensity of the 380 cm–1 INS mode, the two
modes must be accidentally degenerate.Some time ago we showed[37] that, provided
that the geometry was reasonably accurate, the mode eigenvectors that
describe the motion (i.e., the amplitude of vibration of each atom
in the mode) are relatively insensitive to the eigenvalue (transition
energy). This means that the calculated transition energies can be
shifted to match the experimental values as a means to test an assignment
scheme. Table S9 shows that the bond distances
are within 0.03 Å, and the angles are within 0.5°, thus
meeting the structural accuracy criterion.Figure b shows
the calculated spectrum based on the experimental assignments (columns
5 and 7) and Figure c based on the computational assignments (columns 8–10) given
in Table . To generate
the calculated spectra, we have used one of the CASTEP calculations
(that shown in Figure b) and shifted the internal modes to the predicted positions, leaving
the lattice modes unchanged. We have also made the assignment ν5 = ν17 = 375 cm–1.
Figure 10
Observed
and calculated INS spectra of Fe(CO)5: (a)
phase II at 20 K, (b) simulation of the literature assignments,[18−20] (c) the same as (b) but with the degeneracy removed from ν11 and (d) with final assignments (see Table ).
Observed
and calculated INS spectra of Fe(CO)5: (a)
phase II at 20 K, (b) simulation of the literature assignments,[18−20] (c) the same as (b) but with the degeneracy removed from ν11 and (d) with final assignments (see Table ).The strong infrared Fe–C≡O bending
modes, ν7 (A2″) and ν11 (E′), have been assigned to the
bands at
613 and 639 cm–1. This assignment is based on the
reported[14] presence of a very weak band
in the Raman spectrum of the liquid at 653 cm–1.
A subsequent study[16] did not detect this
band, and we do not observe it in the liquid. There is a weak band
at 657 cm–1 in the solid-state Raman spectra and
bands at 613, 637, and 657 cm–1 are clearly seen
in the INS spectra. Simulating the INS spectrum with the literature
assignments generates the spectrum shown in Figure b. Comparison with the experimental spectrum
(Figure a) shows
that the relative intensities of the modes in the 600–700 cm–1 region are inverted. If the degeneracy of ν11 is lifted and the components assigned to the 637 and 657
cm–1 bands, as can be seen from this region in Figure c, there is still
an intensity mismatch. If the assignments are reversed, that is, ν11 (E′) = 613 cm–1 and the two factor group components of ν7 (A2″) are assigned at 637 and 657 cm–1, as seen in Figure d, there is good
agreement with the experimental data, as shown in
Figure a. ν7 is the
only mode that shows a significant factor group splitting in this
region; the reasons for this are unexplained.At this stage,
6 of the 10 modes have been assigned; the remaining
4 are 3 Fe–CO stretch modes [A1′ (ν3), A2″ (ν8), E′ (ν13)] and 1 Fe–C≡O
bending mode (E″ (ν16). In the spectra, features at 427 and 475 cm–1 (infrared) and 447 and 489 cm–1 (Raman) are present.
In the INS, there is a “trident” of strong modes at
420, 447, and 477 cm–1 and a weak feature at 490
cm–1. Previous work has assigned the infrared mode
at 475 cm–1 to ν13, with the 490
cm–1 Raman band considered to be its Raman counterpart.
In the solid, the 490 cm–1 band is resolved into
two components, as shown in the bottom part of Figure , at 488 and 495 cm–1.
Bigorgne[14] assigned the lower energy one
to ν13 and the higher energy one to ν16 (E″). “For lack of better
evidence”, Jones et al.[16] also adopted
this assignment. The INS data show that this cannot be correct. There
is an intense band at 477 cm–1 coincident with the
infrared mode, so this must be ν13 (E′), but there is insufficient intensity for the
INS feature at 490 cm–1 to be an E mode. We will return to the assignment of this mode later.By default, the infrared band at 427 cm–1 must
be ν8 (A2″). Based on a matrix isolation
study,[17] the assignment of ν8 and ν13 was subsequently reversed and this
has been adopted in the computational studies.[18−20] The justification
was that under a specific set of conditions, the 477 cm–1 band was present as a doublet, while the 427 cm–1 band was always a singlet, suggesting that they were E and A modes, respectively. The INS shows that this
is not tenable; there is insufficient intensity in an A-type mode to account for the INS band at 477 cm–1. We note that the matrix infrared spectra show the presence of multiple
sites on deposition; that more than one can persist is not unreasonable.The only remaining Raman mode is the feature at 447 cm–1 and Jones[16] has provided convincing arguments
that this must be ν3 (A1′). There
is insufficient intensity in an A mode to account
for the strength of the 447 cm–1 INS band, so this
must be coincident with the E″ mode,
ν16. The latter has also been assigned to the band
at ∼550 cm–1 by the computational studies,[18−20] with ν12 at 447 cm–1. This is
not credible because there is a band in the gas phase infrared spectrum[16] at 542 cm–1 and the intensity
is incompatible with it being an overtone or combination, so it must
be a fundamental. Recall that E″ modes are infrared-inactive.The Raman and infrared spectra
show ν4 and ν8 at 419 and 427 cm–1, respectively. To account
for the intensity of the INS band at 419 cm–1, ν8 must be accidentally degenerate with ν4 in
the solid state. With these assignments, good agreement between the
observed and calculated INS spectra is obtained, as shown in Figure a,d.The
lattice modes (translations and librations) and the four OC–Fe–CO
bending modes occur in the region below 150 cm–1. In the gas phase infrared spectrum,[16] the only mode detected is at 105 cm–1. In the
liquid, we find weak infrared bands at 72 and 108 cm–1, and in the Raman spectrum, we find strong bands at 80 and 106 cm–1. The infrared–Raman coincidence shows that
the ∼106 cm–1 band must be the E′ mode ν14. The 72 cm–1 band must therefore be ν9, (A2″). This
band was also found by Bigorgne[14] but not
by Jones,[16] who assumed ν9 must be in the vicinity of ν14 and hence assigned
it as 100 ± 15 cm–1.The intense liquid
phase Raman band at 106 cm–1 is unusually broad
and the reason for this becomes apparent in the
solid state, where a strong mode is revealed at ∼130 cm–1. This was also seen by Bigorgne[14] but has been overlooked by everyone else. We assign this
as the E″ mode ν18.The remaining liquid phase Raman band at 80 cm–1 is therefore the second E′ mode
ν15, seen in the solid state at 84 cm–1. This provides a ready explanation for the 490 cm–1 INS band and the 488/495 cm–1 Raman doublet as
the combination (ν15 + ν4) with
symmetry A1′ ⊗ E′ = E′, hence Raman-active.In the low energy region, the congested nature of the INS spectrum
makes it less useful for assignments. However, the intensity and width
of the feature at ∼120 cm–1 is consistent
with our assignment of two E modes being present.Figure d shows
the INS spectrum generated using the assignments in the last column
of Table . It can
be seen that the positions and relative intensities of the modes in
the 350–700 cm–1 region are well reproduced.
The profile in the region below 200 cm–1 is approximately
correct but the intensity relative to the 350–700 cm–1 region is too high. In part, this is because the simulated spectrum
is based on a Γ-point-only calculation, whereas the INS spectrum
is sensitive to all wavevectors across the entire Brillouin zone,
so the vibrational dispersion will broaden the modes. The low site
symmetry and close proximity in energy also means that mode coupling
will be significant, which means that the factor group splitting is
much larger than in the higher energy region. In particular, this
probably accounts for why the INS feature at ∼120 cm–1 is so ill-defined.
Conclusions
In this work, we have re-examined the structure
and vibrational
spectroscopy of Fe(CO)5, both of which have provided surprises.
The diffraction study found a hitherto unknown phase transition, although
a recent study[38] of iron carbonyl using
Raman spectroscopy had determined that two high-pressure phases exist
in the region up to ∼16 GPa and ∼600 K, above which
pressures and temperatures the material breaks down into a mixture
of hematite and a polymeric C−O solid. In that work, the I
→ II phase boundary was represented by a straight line with
a zero-pressure intercept at ∼160 K; however, the scatter of
their observations is consistent with a steeper dT/dP at low pressure that could result in an intercept
closer to 100 K. It thus seems reasonable to hypothesize that the
high-pressure phase II is the same as our low-temperature phase II.
This is supported by Raman mode splitting at the high-pressure I →
II transition, indicating a lowering of the molecular symmetry. A
high-pressure diffraction study is required to further test this hypothesis.Our diffraction study has shown that in the solid state, the axial
Fe–C and C≡O lengths are longer and shorter than the
equivalent equatorial values, at all temperatures from just below
the melting point at 252 to 10 K, as shown in Table S8. In agreement with earlier GED studies,[2] the most recent GED study[39] found the axial Fe–C bond lengths to be shorter
than the equatorial ones, while the C≡O bond lengths were equal
within errors. There appears to be a real difference between the solid
and gas phase structures.Our work reports the characterization
of a ferroelastic transition
using high-resolution neutron powder diffraction. Analyses of such
phenomena in organic or metal–organic crystals are relatively
uncommon and usually confined to high symmetry systems and transitions
closer to room temperature. Furthermore, it is usual for strain arising
from such transitions to be determined using mechanical gauges rather
than diffraction. In this instance, we have evaluated the strain in
a triclinic crystal, requiring a description of the spontaneous strain
in terms of a second-rank tensor, something that is straightforward
to achieve with high-precision powder diffraction data but practically
very difficult using strain gauges on a single crystal of such low
symmetry. In addition, the diffraction data permit a determination
to be made of subtle changes in the crystal structure that, via a
Hirschfeld surface analysis, suggest to us that the origin of the
transition is van der Waals strain. There is considerable interest
in developing molecular strain gauges based on ferroelastic-layered
van der Waals solids[40] and the phenomenological
insights garnered through this study may guide the design of materials
with real-world applications.INS spectroscopy has enabled the
observation of the internal modes
for the first time. While only one mode is forbidden in the gas phase,
there are several other modes that were only known from overtones
and combinations. The unique attribute of INS spectroscopy that the
intensity is determined largely by the amplitude of motion, which
means that it has been possible to test the various assignment schemes.
All previous assignment schemes are incorrect in, at least, several
respects. The assignment in the last column of Table is the only one that is compatible with
all the information from infrared, Raman, and INS spectroscopies.The biggest surprise in this work is the failure of DFT to correctly
predict the vibrational spectra. Previous work on the metal hexacarbonyls[23] yielded calculated spectra in excellent agreement
with the experimental data. As shown in Figure , this is not the case for Fe(CO)5. This also explains why most of the revisions to the assignments
made on the basis of the computational studies must be rejected. Why
DFT fails here is difficult to understand. The calculated geometry,
as shown in Table S9, has bond lengths
that differ from experimental values by less than 0.03 Å and
the angles by less than 0.5°. For comparison, the accuracy of
the calculated geometry of the metal hexacarbonyls[23] was similar.
Authors: Beulah S Narendrapurapu; Nancy A Richardson; Andreas V Copan; Marissa L Estep; Zheyue Yang; Henry F Schaefer Journal: J Chem Theory Comput Date: 2013-06-06 Impact factor: 6.006