| Literature DB >> 36107605 |
Yunxia Tao1, Chongchai Li1, Tianshu Gao2, Jingjing Huo2.
Abstract
This study aimed to explore the effectiveness and safety of Sishen pills for the treatment of diarrheal diabetic enteropathy (DDE). The Traditional Chinese Medicine (TCM) Systems Pharmacology and BATMAN-TCM databases were used to determine the chemical composition of Sishen pills and thus predict information on protein targets. We searched for potential targets of DDE in the GeneCards, DrugBank, Therapeutic Target (TTD), and DisGeNET databases. Using the intersection of the drug and disease targets, protein-protein interaction (PPI) networks and molecular interaction modules were constructed, and key targets were screened. The intersecting gene targets were imported into the Metascape database to conduct Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses. The core targets and active ingredients were then docked at the molecular level. Sishen pills contain 70 active ingredients, 463 targets, and 566 disease targets. A module analysis of the targets revealed that the module was mainly related to adrenergic receptor activity, the adenosine phosphate kinase signaling pathway, and the G protein-coupled receptor signaling pathway. The GO and KEGG pathway enrichment results indicated that the protein genes regulated by Sishen pills were mainly enriched in the response to lipopolysaccharides, the AMPK signaling pathway, the JAK-STAT signaling pathway, and other signaling pathways. The molecular docking results showed that the core active compounds exhibited good binding activity with the predicted targets. Sishen pills can regulate the immune function of the body through anti-inflammatory and antibacterial effects for the treatment of DDE.Entities:
Mesh:
Substances:
Year: 2022 PMID: 36107605 PMCID: PMC9439763 DOI: 10.1097/MD.0000000000030096
Source DB: PubMed Journal: Medicine (Baltimore) ISSN: 0025-7974 Impact factor: 1.817
Chinese medicine powder.
| Mark | Active ingredients of psoralen | Database | |
|---|---|---|---|
| BGZ13 | Corylifolinin | BATMAN-TCM | |
| BGZ1 | Sophoracoumestan A | BATMAN-TCM | |
| BGZ2 | Isopsoralidin | BATMAN-TCM | |
| BGZ3 | Bavachin | BATMAN-TCM | |
| BGZ4 | Bakuchiol | BATMAN-TCM | |
| BGZ5 | Isobavachin | BATMAN-TCM | |
| BGZ6 | Bavachalcone | BATMAN-TCM | |
| BGZ7 | Bavachromene | BATMAN-TCM | |
| BGZ8 | Psoralidin | BATMAN-TCM | |
| B | Stigmasterol | BATMAN-TCM | |
| BGZ9 | Xanthotoxin | BATMAN-TCM | |
| BGZ10 | Backuchiol | BATMAN-TCM | |
| BGZ11 | Angelicin | BATMAN-TCM | |
| BGZ12 | Isobavachalcone | BATMAN-TCM | |
Figure 1.Venn diagram.
Figure 2.PPI network diagram of the cotarget genes. PPI = protein–protein interaction.
Figure 3.Protein function modules.
Molecular function description table of the protein modules.
| Molecular function |
|---|
| Alpha2-adrenergic receptor activity |
| MAPK activity |
| G protein-coupled receptor binding |
MAPK = mitogen-activated protein.
Key target information.
| Name | Degree | Betweenness | Closeness |
|---|---|---|---|
| TNF | 30 | 1061.22518 | 0.493023256 |
| AKT1 | 30 | 1317.280333 | 0.486238532 |
| JUN | 29 | 831.6593689 | 0.509615385 |
| IL-6 | 27 | 1009.95606 | 0.493023256 |
| VEGFA | 23 | 724.1759745 | 0.5 |
| TP53 | 21 | 671.3859273 | 0.466960352 |
| MAPK1 | 21 | 724.6618487 | 0.486238532 |
| INS | 20 | 572.9208202 | 0.460869565 |
| CXCL8 | 20 | 995.2608107 | 0.447257384 |
| EGFR | 20 | 619.0523884 | 0.471111111 |
| MAPK14 | 20 | 533.7856554 | 0.471111111 |
| EGF | 19 | 642.3217511 | 0.469026549 |
| EDN1 | 17 | 878.0029932 | 0.460869565 |
| FOS | 17 | 211.3487166 | 0.449152542 |
| CTNNB1 | 16 | 214.0368913 | 0.439834025 |
| IGF1 | 16 | 225.5731944 | 0.449152542 |
| IL1B | 16 | 102.5362619 | 0.429149798 |
| F2 | 15 | 846.4041703 | 0.410852713 |
| ALB | 14 | 610.6252906 | 0.429149798 |
Figure 4.GO and KEGG enrichment analyses. GO = gene ontology, KEGG = Kyoto Encyclopedia of Genes and Genomes.
Figure 5.Active ingredient-target network diagram of Sishen pills.
Molecular docking energy.
| Binding energy (kJ mol–1) | Quercetin | Stigmasterol | β -Sitosterol |
|---|---|---|---|
| PTGS2 | –7.03 | –9.62 | 4.6 |
| SCN5A | –6.65 | –39.75 | –35.56 |
| ADRB2 | –8.58 | –24.27 | –15.9 |
Figure 6.(A) Stigmasterol-SCN5A. (B) β-Sitosterol-SCN5A.