Literature DB >> 36098931

In silico and In vitro Analysis of Nigella sativa Bioactives Against Chorismate Synthase of Listeria monocytogenes: a Target Protein for Biofilm Inhibition.

Ramar Vanajothi1, Sundaresan Bhavaniramya2, Rajendran Vijayakumar3, Abdulaziz S Alothaim3, Yaser E Alqurashi3, Selvaraju Vishnupriya4, Baskaralingam Vaseeharan2, Muthu Umadevi5.   

Abstract

Listeria monocytogenes have the ability to form biofilms, which aid in the contamination of food and the evasion of antimicrobials. Consumption of L. monocytogenes laden food can promote mild to severe infection in humans and cause serious health issues. Therefore, biofilm development by L. monocytogenes is considered to be a major concern for both healthcare and food safety. This study attempted to target chorismate synthase, an essential protein predicted to be involved in the biofilm pathway. Nigella sativa is renowned for its applications in folk medicine; hence, bioactive ingredients reported were used for molecular docking studies. In the absence of a three-dimensional structure of chorismate synthase from L. monocytogenes, a homology model was generated using the Modeller program. A model with the highest DOPE score was chosen and validated. The reliable model was subjected to docking studies with 30 ligands from N. sativa. From this approach, α-longipinene was unveiled as the best hit. Further in vitro studies demonstrated the antibiofilm potential of α-longipinene against L. monocytogenes. Overall, the study reveals lead molecules from N. sativa as promising antibiofilm agents against L. monocytogenes. Hence, extended investigation with lead molecules will provide sustainable strategies to prevent biofilm-mediated problems due to L. monocytogenes.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Biofilm; Chorismate synthase; Listeria monocytogenes; Nigella sativa

Year:  2022        PMID: 36098931     DOI: 10.1007/s12010-022-04157-3

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   3.094


  22 in total

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Authors:  Supraja Puttamreddy; Nancy A Cornick; F Chris Minion
Journal:  Infect Immun       Date:  2010-03-29       Impact factor: 3.441

2.  Structural analysis and molecular docking of potential ligands with chorismate synthase of Listeria monocytogenes: a novel antibacterial drug target.

Authors:  Md Musharaf Hossain; Pradip Kumar Roy; A T M Jannatul Mosnaz; Shahriar Kabir Shakil; Md Mehedi Hasan; Shamsul H Prodhan
Journal:  Indian J Biochem Biophys       Date:  2015-02       Impact factor: 1.918

3.  Comparative Protein Structure Modeling Using MODELLER.

Authors:  Benjamin Webb; Andrej Sali
Journal:  Curr Protoc Bioinformatics       Date:  2016-06-20

4.  An in silico approach for understanding the molecular evolution of clinically important metallo-beta-lactamases.

Authors:  Arijit Pal; Anusri Tripathi
Journal:  Infect Genet Evol       Date:  2013-08-15       Impact factor: 3.342

5.  Structural analysis of chorismate synthase from Plasmodium falciparum: a novel target for antimalaria drug discovery.

Authors:  Satya Tapas; Abhinav Kumar; Sonali Dhindwal; Pravindra Kumar
Journal:  Int J Biol Macromol       Date:  2011-07-27       Impact factor: 6.953

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Authors:  Md Abul Barkat; Javed Ahmad; Mohammad Ahmed Khan; Sarwar Beg; Farhan Jalees Ahmad
Journal:  Curr Drug Targets       Date:  2018       Impact factor: 3.465

Review 7.  A review on therapeutic potential of Nigella sativa: A miracle herb.

Authors:  Aftab Ahmad; Asif Husain; Mohd Mujeeb; Shah Alam Khan; Abul Kalam Najmi; Nasir Ali Siddique; Zoheir A Damanhouri; Firoz Anwar
Journal:  Asian Pac J Trop Biomed       Date:  2013-05

Review 8.  Thymoquinone: A novel strategy to combat cancer: A review.

Authors:  Muhammad Imran; Abdur Rauf; Imtiaz Ali Khan; Muhammad Shahbaz; Tahira Batool Qaisrani; Sri Fatmawati; Tareq Abu-Izneid; Ali Imran; Khaliq Ur Rahman; Tanweer Aslam Gondal
Journal:  Biomed Pharmacother       Date:  2018-07-11       Impact factor: 6.529

Review 9.  zzm321990 Listeria monocytogenes Biofilms in the Food Industry: Is the Current Hygiene Program Sufficient to Combat the Persistence of the Pathogen?

Authors:  Tina Mazaheri; Brayan R H Cervantes-Huamán; Maria Bermúdez-Capdevila; Carolina Ripolles-Avila; José Juan Rodríguez-Jerez
Journal:  Microorganisms       Date:  2021-01-15

10.  ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins.

Authors:  Markus Wiederstein; Manfred J Sippl
Journal:  Nucleic Acids Res       Date:  2007-05-21       Impact factor: 16.971

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