Literature DB >> 36094213

Complete Genome Sequence of Methanofollis aquaemaris BCRC 16166T, Isolated from a Marine Aquaculture Fishpond.

Sheng-Chung Chen1,2,3, Shu-Jung Lai4,5, Yi-Ting You3, Chao-Jen Shih6, Yen-Chi Wu6, Chih-Hung Wu2,7, Ching-Hua Liao2.   

Abstract

The hydrogenotrophic methanogen Methanofollis aquaemaris BCRC 16166T (= N2F9704T = DSM 14661T) was isolated from a marine aquaculture fishpond near Wang-gong (Taiwan, Republic of China). The genome of strain BCRC 16166T was selected for sequencing in order to provide further information about the species delineation and its infected virus.

Entities:  

Year:  2022        PMID： 36094213      PMCID： PMC9583781          DOI： 10.1128/mra.00743-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  20 in total

1.  QUAST: quality assessment tool for genome assemblies.

Authors:  Alexey Gurevich; Vladislav Saveliev; Nikolay Vyahhi; Glenn Tesler
Journal:  Bioinformatics       Date:  2013-02-19       Impact factor: 6.937

2.  Methanoculleus sediminis sp. nov., a methanogen from sediments near a submarine mud volcano.

Authors:  Sheng-Chung Chen; Mei-Fei Chen; Mei-Chin Lai; Chieh-Yin Weng; Sue-Yao Wu; Saulwood Lin; Tsanyao F Yang; Po-Chun Chen
Journal:  Int J Syst Evol Microbiol       Date:  2015-04-08       Impact factor: 2.747

3.  Methanofollis formosanus sp. nov., isolated from a fish pond.

Authors:  Sue-Yao Wu; Sheng-Chung Chen; Mei-Chin Lai
Journal:  Int J Syst Evol Microbiol       Date:  2005-03       Impact factor: 2.747

Review 4.  40 Years of archaeal virology: Expanding viral diversity.

Authors:  Jamie C Snyder; Benjamin Bolduc; Mark J Young
Journal:  Virology       Date:  2015-04-10       Impact factor: 3.616

5.  Reclassification of Methanogenium tationis and Methanogenium liminatans as Methanofollis tationis gen. nov., comb. nov. and Methanofollis liminatans comb. nov. and description of a new strain of Methanofollis liminatans.

Authors:  G Zellner; D R Boone; J Keswani; W B Whitman; C R Woese; A Hagelstein; B J Tindall; E Stackebrandt
Journal:  Int J Syst Bacteriol       Date:  1999-01

6.  Methanoculleus taiwanensis sp. nov., a methanogen isolated from deep marine sediment at the deformation front area near Taiwan.

Authors:  Chieh-Yin Weng; Sheng-Chung Chen; Mei-Chin Lai; Sue-Yao Wu; Saulwood Lin; Tsanyao F Yang; Po-Chun Chen
Journal:  Int J Syst Evol Microbiol       Date:  2015-01-09       Impact factor: 2.747

7.  Methanofollis ethanolicus sp. nov., an ethanol-utilizing methanogen isolated from a lotus field.

Authors:  Hiroyuki Imachi; Sanae Sakai; Hiroyuki Nagai; Takashi Yamaguchi; Ken Takai
Journal:  Int J Syst Evol Microbiol       Date:  2009-04       Impact factor: 2.747

8.  Comparative analysis of the mosaic genomes of tailed archaeal viruses and proviruses suggests common themes for virion architecture and assembly with tailed viruses of bacteria.

Authors:  Mart Krupovic; Patrick Forterre; Dennis H Bamford
Journal:  J Mol Biol       Date:  2010-01-25       Impact factor: 5.469

9.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

10.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971
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