Noriyuki Isobe1,2, Yuto Kaku1,2, Satoshi Okada3, Sachiko Kawada3, Keiko Tanaka3, Yoshihiro Fujiwara4, Ryota Nakajima4, Dass Bissessur5, Chong Chen3. 1. Biogeochemistry Research Center, Research Institute for Marine Resources Utilization (MRU), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0061, Japan. 2. Department of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan. 3. Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-STAR), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0061, Japan. 4. Research Institute for Global Change (RIGC), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Yokosuka, Kanagawa 237-0061, Japan. 5. Department for Continental Shelf, Maritime Zones Administration and Exploration, Prime Minister's Office, 2nd Floor, Belmont House, 12 Intendance Street, Port Louis 11328, Mauritius.
Abstract
Chitin is a key component of hard parts in many organisms, but the biosynthesis of the two distinctive chitin allomorphs, α- and β-chitin, is not well understood. The accurate determination of chitin allomorphs in natural biomaterials is vital. Many chitin-secreting living organisms, however, produce poorly crystalline chitin. This leads to spectrums with only broad lines and imprecise peak positions under conventional analytical methods such as X-ray diffraction (XRD), Fourier-transform infrared spectroscopy, and solid-state nuclear magnetic resonance spectroscopy, resulting in inconclusive identification of chitin allomorphs. Here, we developed a novel method for discerning chitin allomorphs based on their different complexation capacity and guest selectivity, using ethylenediamine (EDA) as a complexing agent. From the peak shift observed in XRD profiles of the chitin/EDA complex, the chitin allomorphs can be clearly discerned. By testing this method on a series of samples with different chitin allomorphs and crystallinity, we show that the sensitivity is sufficiently high to detect the chitin allomorphs even in near-amorphous, very poorly crystalline samples. This is a powerful tool for determining the chitin allomorphs in phylogenetically important chitin-producing organisms and will pave the way for clarifying the evolution and mechanism of chitin biosynthesis.
Chitin is a key component of hard parts in many organisms, but the biosynthesis of the two distinctive chitin allomorphs, α- and β-chitin, is not well understood. The accurate determination of chitin allomorphs in natural biomaterials is vital. Many chitin-secreting living organisms, however, produce poorly crystalline chitin. This leads to spectrums with only broad lines and imprecise peak positions under conventional analytical methods such as X-ray diffraction (XRD), Fourier-transform infrared spectroscopy, and solid-state nuclear magnetic resonance spectroscopy, resulting in inconclusive identification of chitin allomorphs. Here, we developed a novel method for discerning chitin allomorphs based on their different complexation capacity and guest selectivity, using ethylenediamine (EDA) as a complexing agent. From the peak shift observed in XRD profiles of the chitin/EDA complex, the chitin allomorphs can be clearly discerned. By testing this method on a series of samples with different chitin allomorphs and crystallinity, we show that the sensitivity is sufficiently high to detect the chitin allomorphs even in near-amorphous, very poorly crystalline samples. This is a powerful tool for determining the chitin allomorphs in phylogenetically important chitin-producing organisms and will pave the way for clarifying the evolution and mechanism of chitin biosynthesis.
Chitin is one of the principal organic
skeletal components in invertebrate
animals such as arthropods, mollusks, sponges, cnidarians, and annelids.[1−8] Chitin is bio-synthesized in the form of microfibrils, where the
elongated chitin molecules are packed in a highly ordered manner to
form nanofibrous structures.[9−13] Chitin crystalline nanofibers exhibit two distinctive forms, one
with an antiparallel packing of chitin molecules known as α-chitin,[14,15] and another with a parallel packing known as β-chitin,[16−18] both of which occur in nature and are biosynthesized by organisms.[1,2] In addition, γ-chitin has been described as a third allomorph,[19] but it is structurally close to α-chitin
and generally considered to be a variant of α-chitin.[2,20] Arthropods such as crustaceans produce α-chitin, which is
thought to be more abundant naturally compared to β-chitin,
which is the main allomorph produced by diatoms,[21,22] annelid worms,[10] and mollusks such as
squids.[23] The two forms in chitin are analogous
to cellulose, which also forms parallel (cellulose I)[24] and anti-parallel (cellulose II)[25] packing, but in cellulose, only the parallel-packed cellulose I
occurs naturally.[26] The mechanisms behind
natural production of parallel-packed nanofibers is relatively well
understood from cellulose research,[27,28] but less is
known about the natural production of chitin nanofibers, especially
how living organisms make highly crystalline anti-parallel α-chitin.[29]The precise identification of chitin allomorphs
is inevitable and
vital in addressing this question. Analytical methods often employed
to distinguish them include X-ray diffraction (XRD),[23,30] Fourier-transform infrared spectroscopy (FT-IR),[31,32] and solid-state nuclear magnetic resonance spectroscopy (NMR).[33,34] In the cases where the chitin samples are highly crystalline, such
as chitin in the tubes of siboglinid worms,[10,35] the peaks in the spectrums are indeed sufficiently sharp and well-defined
for locating precise peak positions or peak splitting characteristic
to each chitin allomorph. However, poorly crystalline samples, like
those with low crystallinity or small crystal size, result in spectrums
with only broad lines with imprecise peak position, leading to inconclusive
identification of chitin allomorphs.[36−38]The accurate determination
of chitin allomorphs in poorly crystalline
chitin is the key to understanding their natural biosynthesis, since
evolutionarily important chitin-secreting living organisms such as
lancelets, tunicates, and mollusks generally produce poorly crystalline
chitin.[36,39,40] To discriminate
the two chitin allomorphs, the high intercalation (complexation) capacity
of β-chitin, arising from the absence of hydrogen bonding between
molecular sheets in β-chitin,[41] is
useful: only β-chitin is transformed into hydrates by intercalating
water molecules between molecular sheets. However, this hydration-based
determination of chitin allomorphs in poorly crystalline samples is
not straightforward. Here, we propose a novel method for the identification
of chitin allomorphs based on the different complexation capacity
and guest selectivity of α- and β-chitin, using ethylenediamine
(EDA) as a complexing agent.[41−44] The EDA can be intercalated in both α- and
β-chitin, but β-chitin can incorporate more EDA molecules
than α-chitin,[41,42] making the two chitin allomorphs
discernible even in poorly crystalline samples. We test and show the
effectiveness of this new method in determining chitin allomorphs
using samples with various levels of crystallinity.
Materials and Methods
Materials
Purified water was used throughout this study
(Milli-Q Advantage A10, Merck, Germany). Hydrochloric acid (HCl),
sodium hydroxide (NaOH), sodium borohydride (NaBH4), acetic
acid (AcOH), chloroform (CHCl3), sodium chlorite (NaClO2), acetic anhydride (Ac2O), methanol (MeOH), ethanol
(EtOH), EDA, and chitosan (chitosan 100; degree of acetylation (DA):
∼0.2) were obtained from FUJIFILM Wako Pure Chemical (Osaka,
Japan).
Sample Collection and Purification
A red king crab
(Paralithodes camtschaticus) and several individuals
of spear squids (Heterololigo bleekeri) were purchased
in a grocery store. The king crab’s exoskeleton and the squids’
gladius (“squid pen”) were isolated by dissection. The
siboglinid tubeworm (Lamellibrachia satsuma) was
collected from Nikko seamount (23°04.86’N, 142°19.51′E,
458 m deep, Dec 2020) by a manipulator on the remotely operated vehicle
(ROV) KM-ROV during the R/V Kaimei cruise KM20-10C leg 2. A Scaly-foot Snail (Chrysomallon
squamiferum) was collected from Solitaire hydrothermal field
(19°33.410 S, 65°50.890 E, 2606 m depth, Feb 2013) by a
suction sampler on the deep-submergence vehicle (DSV) Shinkai
6500 during R/V Yokosuka cruise YK13-02,
and the scales were dissected from the foot. Planktonic copepods (Pontella fera, Calanoida) were collected from the surface
water during the R/V Yokosuka cruise YK19-11 by a
neuston net from the Northwest Pacific approximately 400 km east off
Japan (35°07.0’N, 145°00.0′E), identified
and sorted out under a dissecting microscope, and then air-dried whole.
Purification of chitin samples was performed according to the previous
studies.[45−48]Each sample was cut into small pieces about 1 cm in size (except
Scaly-foot Snail’s scale and copepods that were purified whole)
and soaked in a 2:1 (by volume) mixture of chloroform and acetic acid
for 24 h to extract lipids. Demineralization, deproteinization, and
decolorization were then carried out using 1 M HCl, 2.5 M aqueous
NaOH, and 0.3 w/v% aqueous NaClO2 solution, respectively,
followed by thorough washing with water. Each purification step was
repeated four times. Purified samples were freeze-dried, except the
squid pen that was subjected
to air-drying at room temperature from water and EtOH, oven-drying
at 60 and 150 °C from water, and freeze-drying from water. A N-acetylated chitosan sample was prepared by the acetylation
of chitosan in acidic alcohol solution.[49,50] Briefly, chitosan
powder (chitosan 100, 1.5 g) was dissolved in 6 mL of AcOH/54 mL of
water, followed by dilution with 240 mL of MeOH. The chitosan solution
was then cooled to −10 °C, and the desired amount of Ac2O (molar ratio Ac2O/NH2: 2.1) was added.
After complete mixing at −10 °C, the mixture was poured
into cylindrical molds (bore size: 14 mm) at room temperature and
left for 10 h to ensure complete gelation. After thoroughly washing
with water, the N-acetylated chitosan sample was
oven-dried at 105 °C. To observe the transformation from β-chitin
to α-chitin, the purified squid pen was treated with 7, 7.5,
and 8 M HCl for 0.5 h. After thorough washing with water, the HCl-treated
squid pen samples were oven-dried at 105 °C. To observe the transformation
from β-chitin to chitosan, the purified L. satsuma was treated with 12.5 M aqueous sodium hydroxide containing a small
amount of NaBH4 to prevent depolymerization, at 90 °C
for 0.5, 3, and 6 h. After thoroughly washing with water, the NaOH-treated L. satsuma samples were oven-dried at 105 °C. DA was
measured by conductivity titration except N-acetylated
chitosan, the DA of which was retrieved from literature.[50]
XRD Analysis
A wide-angle XRD experiment was performed
on Nanopix (Rigaku Japan) at 40 kV and 30 mA with monochromatized
and collimated Cu Kα radiation (λ = 1.548 Å). The
capillary-sealed dry and wet specimen (saturated complex with water
or EDA prepared by the immersion in water or EDA at room temperature
for several hours[42,51]) was subjected to XRD measurements
by the transmitting beam, where the camera length (sample-to-CCD distance:
82.37 mm) was calibrated with Si powder (d = 0.31355 nm). The peak
top position was determined from the position with the highest intensity
in the peak. The diffraction peaks were fitted with a pseudo-voigt
function, and the crystal size, D, perpendicular
to the diffraction planes, (020) plane in α-chitin and (010)
plane in β-chitin, was evaluated using Scherrer’s expression:where θ is the diffraction angle, λ
is the wavelength of X-ray, and β is the peak
width at half of the maximum intensity.
Results and Discussion
An overview of the chitin samples
with known allomorphs used in
the present study is shown in Figure a. Native chitin samples are characterized generally
by three parameters: (i) allomorphs, α and β, (ii) crystallinity,
and (iii) degree of N-acetylation. The β allomorph
can be transformed into α-chitin by acid treatment[30] or regeneration (dissolution and coagulation).[54] Due to the higher stability of the antiparallel
α-chitin compared to the parallel β-chitin, this transformation
is irreversible and α-chitin never reverts to β-chitin.
Chitin allomorphs are naturally produced with a wide range of crystallinity,
depending on the organisms of origin.[1,55,56] The degree of N-acetylation is another
important parameter that varies among the organism-biosynthesized
natural chitins and affects the quality of chitin allomorphs.[1,55−57] The monomeric unit of chitin is N-acetyl-d-glucosamine, and the acetyl groups can therefore
be removed by alkaline hydrolysis. Through deacetylation, chitin allomorphs
lose crystallinity and become a rather amorphous substance denoted
as chitosan. Through the N-acetylation of chitosan
by acetic anhydride in acidic alcohol solutions, chitosan can be reverted
to chitin and the resulting N-acetylated chitosan
is identical to α-chitin with poor crystallinity.[50] For a comprehensive test across an array of
possible chitins, here we used α-chitin from the highly crystalline
king crab carapace, the poorly crystalline N-acetylated
chitosan, and β-chitin from the highly crystalline siboglinid
worm tubes, the poorly crystalline squid pen. In addition, we also
examined chitosan as the representative of samples with a low DA.
Figure 1
Schematic
illustration of (a) chitin samples used in this study
and (b) cross-sectional crystal structure of native, dihydrate, and
EDA complex of α- and β-chitin. Dotted rectangles represent
the unit cell of the crystal structure of native, dihydrate, and EDA
complex of α- and β-chitin.[15,41,42,52,53] Orange bars and gray shadows represent the cross-section of chitin
molecules and molecular sheets, respectively.
Schematic
illustration of (a) chitin samples used in this study
and (b) cross-sectional crystal structure of native, dihydrate, and
EDA complex of α- and β-chitin. Dotted rectangles represent
the unit cell of the crystal structure of native, dihydrate, and EDA
complex of α- and β-chitin.[15,41,42,52,53] Orange bars and gray shadows represent the cross-section of chitin
molecules and molecular sheets, respectively.The identification of chitin allomorphs was conducted
based on
the complexations of chitin, as schematized in Figure b. In both α- and β-chitin, the
molecular sheets of chitin molecules are the primary building units
(Figure b). The different
distances between these molecular sheets in α- and β-chitin
result in characteristic peaks at 2θ = 9.4° and 9.6°,
respectively. When hydrated with water, β-chitin takes up water
between the molecular sheets and increases the distance between them,
leading to a shift of above-mentioned peak to a lower angle, the extent
of which depends on the number of the incorporated water molecules:
2θ = 8.6° in the case of monohydrate (one molecule per
unit cell) and 2θ = 8.0° in dihydrate
(two molecules per unit cell).[16−18,52,53] Since this incorporation of water does not
occur in α-chitin, the peak shift induced by hydration has often
been used to identify the chitin allomorphs.[58] However, in poorly crystalline samples, the identification based
on hydration can be erroneous from a lack of clearly discernable peaks,
due to the characteristic peaks being rather close together (detailed
in the following section). Therefore, we newly employed EDA as the
complexing agent. Although EDA can be incorporated in both α-
and β-chitin, the β-chitin/EDA complex has a much larger
inter-sheet distance (14.4 Å, 2θ = 6.1°)[42] compared with those of β-chitin dihydrate
(11.0 Å, 2θ = 8.0°)[16,53] or α-chitin/EDA complex (11.4 Å, 2θ = 7.8°),[41] making the peak shift
easier to discern even in the poorly crystalline samples.The
representative XRD profiles of the chitin samples are shown
in Figure a. When
the crystallinity is high, one can distinguish α- and β-chitin
with ease from the considerable number of sharp peaks. However, the
poorly crystalline samples exhibited almost identical XRD profiles.
Commercial chitosan also showed a broad profile, but the absence of
the characteristic peak at 2θ = 8.5–9.7° is useful
in its identification. It should be noted that depending on the preparation
condition, chitosan forms hydrates that are rather crystalline, the
XRD profile of which is similar to that of β-chitin (detailed
in the following section). The detail of characteristic peaks at 2θ
= 8.5–9.7° is shown in Figure b. The peak positions of highly crystalline
α- and β-chitin materials matched well with the literature
data.[15,52] However, those of poorly crystalline α-chitin
were lower than the literature data and located in between α-chitin
and β-chitin monohydrate. This is possibly due to a property
reported in cellulose, where the peak shifts to a lower angle by 2θ = ∼ 0.2° when the crystallinity is low
or the crystal size is small.[60] This peak
shift can be a cause for misidentifying α-chitin as β-chitin.
Another issue was seen in the poorly crystalline β-chitin, the
peak of which matched well with that of β-chitin monohydrate,
even though the chitin sample used (squid pen) was oven-dried at 60
°C.
Figure 2
(a) X-ray diffraction profiles of the chitin samples used in this
study. From top to bottom, king crab carapace, siboglinid worm tube, N-acetylated chitosan, squid pen, and commercial chitosan
were used as the representatives of high (″high″ in
red) and poorly (″low″ in orange) crystalline α-chitin,
high (″high″ in green) and poorly (″low″
in blue) crystalline β-chitin, and samples with a low degree
of acetylation (″chitosan″ in yellow), respectively.
The values L and DA are the crystal size calculated
from the peaks at 2θ = 8.5–9.7° [diffraction of
(020) planes in α-chitin and (010) planes in β-chitin]
and the degree of acetylation, respectively; (b) enlarged profiles
of Figure a. α,
βa, βm, βd, and
Cs represent the peak positions of α-chitin, anhydrous
β-chitin, β-chitin monohydrate, β-chitin dihydrate,
and chitosan from the literature data.[15,41,42,52,53,59] Colored dots represent the peak
top position of the profiles.
(a) X-ray diffraction profiles of the chitin samples used in this
study. From top to bottom, king crab carapace, siboglinid worm tube, N-acetylated chitosan, squid pen, and commercial chitosan
were used as the representatives of high (″high″ in
red) and poorly (″low″ in orange) crystalline α-chitin,
high (″high″ in green) and poorly (″low″
in blue) crystalline β-chitin, and samples with a low degree
of acetylation (″chitosan″ in yellow), respectively.
The values L and DA are the crystal size calculated
from the peaks at 2θ = 8.5–9.7° [diffraction of
(020) planes in α-chitin and (010) planes in β-chitin]
and the degree of acetylation, respectively; (b) enlarged profiles
of Figure a. α,
βa, βm, βd, and
Cs represent the peak positions of α-chitin, anhydrous
β-chitin, β-chitin monohydrate, β-chitin dihydrate,
and chitosan from the literature data.[15,41,42,52,53,59] Colored dots represent the peak
top position of the profiles.This recalcitrant nature of β-chitin hydrate
can be a cause
for misidentification of allomorphs when using the conventional method
based on the hydration with water.[58] To
demonstrate this, we analyzed poorly crystalline β-chitin samples
(squid pen) prepared by a series of moderate drying methods (air-dried
from ethanol and water, oven-dried from water at 60 °C, and freeze-dried
from water) that are often employed in the biomaterial studies (Figure ). Air-dried
from water, oven-dried at 60 °C, and freeze-dried from water
gave the peak corresponding to the β-chitin monohydrate. Even
with a much harsher drying condition of oven-dried at 150 °C,
the peak only slightly shifted but never reached the peak position
corresponding to anhydrous β-chitin, though it is known that
the highly crystalline β-chitin can be transformed into anhydrous
form by drying at above 105 °C.[62] Moreover,
β-chitin prepared by air-drying from ethanol matched closely
with literature values for β-chitin dihydrate. This lower peak
position compared to the other drying methods was probably due to
the trace of the β-chitin/ethanol complex.[63] Therefore, attention needs to be paid to the use of biological
samples stored in ethanol, as the peak of air-dried samples after
ethanol storage does not shift to a lower angle by the rehydration,
and the sample can be misinterpreted as α-chitin. In addition,
when the sample is rehydrated by the simple immersion in water, the
peak becomes highly blurred, and the peak position is not discernible.
In this respect, the use of EDA as a complexing agent is advantageous:
the peak of the EDA/β-chitin complex stood out even with simple
immersion in EDA. This high sensitivity of chitin against EDA makes
the preparation of XRD samples and interpretation of the results much
more straightforward compared to the hydration method.
Figure 3
X-ray diffraction profiles
of the squid pen prepared under different
conditions. AD, OD, and FD represent air-dried, oven-dried, and freeze-dried,
respectively. a, m, d, and EDA represent the peak positions of anhydrous
β-chitin, β-chitin monohydrate, β-chitin dihydrate,
and type II form of β-chitin/EDA complex from the literature
data.[42,53,61] Colored dots
represent the peak top position of the profiles.
X-ray diffraction profiles
of the squid pen prepared under different
conditions. AD, OD, and FD represent air-dried, oven-dried, and freeze-dried,
respectively. a, m, d, and EDA represent the peak positions of anhydrous
β-chitin, β-chitin monohydrate, β-chitin dihydrate,
and type II form of β-chitin/EDA complex from the literature
data.[42,53,61] Colored dots
represent the peak top position of the profiles.To test the effectiveness of our chitin/EDA complex
method, the
chitin samples were subjected to complexation with EDA by the simple
immersion in EDA, as shown in Figure . The EDA complex of both high and poorly crystalline
β-chitin fell into the reported peak position of the β-chitin/EDA
complex[42] with a margin of potential experimental
error of plus or minus 2θ = 0.25°, which takes into account
the potential peak shifts toward a lower angle induced by the low
crystallinity or toward a higher angle caused by slightly different
camera lengths (distance between the sample and detector) among the
measurements upon the use of glass capillary with a diameter of 2
mm in XRD experiments (approximate estimate of discrepancy was 2θ = 0.23°). While the EDA complex of highly crystalline
α-chitin was in accordance with the literature data, those of
poorly crystalline α-chitin and chitosan fell into a position
tentatively marked with an asterisk in Figure . Although the exact origin of this slightly
wider distance between molecular sheets compared with the α-chitin/EDA
complex is unknown, the poorly crystalline nature or a lower DA may
be the reason behind the ″loose″ structure due to the
imperfect hydrogen bonding network in poorly crystalline α-chitin
samples. Either way, we show that one can distinguish the chitin allomorphs
from the peak top position of the EDA complex by the following three
categories: β-chitin when the peak is located between 2θ
= 5.8 and 6.3°, poorly crystalline α-chitin or chitosan
between 2θ = 6.9 and 7.4°, and highly
crystalline α-chitin between 2θ = 7.5
and 8.0°.
Figure 4
X-ray diffraction profiles of the EDA complex of chitin
samples
used in this study. From top to bottom, king crab carapace, siboglinid
worm tube, N-acetylated chitosan, squid pen, and
commercial chitosan were used as the representatives of high (″high″
in red) and poorly (″low″ in orange) crystalline α-chitin,
high (″high″ in green) and poorly (″low″
in blue) crystalline β-chitin, and samples with a low degree
of acetylation (″chitosan″ in yellow), respectively.
Colored dots represent the peak top position of profiles. Shades denoted
as α and β are the reported peak position of the EDA complex
of α- and β-chitin with a margin of potential experimental
error of plus or minus 2θ = 0.25°.[41,42] The shade marked with an asterisk is the tentative peak position
of the EDA/chitosan complex, newly reported herein, with a margin
of potential experimental error of plus or minus 2θ = 0.25°
to the peak position observed in chitosan of Figure .
X-ray diffraction profiles of the EDA complex of chitin
samples
used in this study. From top to bottom, king crab carapace, siboglinid
worm tube, N-acetylated chitosan, squid pen, and
commercial chitosan were used as the representatives of high (″high″
in red) and poorly (″low″ in orange) crystalline α-chitin,
high (″high″ in green) and poorly (″low″
in blue) crystalline β-chitin, and samples with a low degree
of acetylation (″chitosan″ in yellow), respectively.
Colored dots represent the peak top position of profiles. Shades denoted
as α and β are the reported peak position of the EDA complex
of α- and β-chitin with a margin of potential experimental
error of plus or minus 2θ = 0.25°.[41,42] The shade marked with an asterisk is the tentative peak position
of the EDA/chitosan complex, newly reported herein, with a margin
of potential experimental error of plus or minus 2θ = 0.25°
to the peak position observed in chitosan of Figure .To further corroborate the three categories, α-chitin
prepared
from β-chitin by a series of hydrochloric acid treatment was
subjected to complexation with EDA. It is known that HCl at 7 M and
above strongly swells highly crystalline β-chitin (siboglinid
worm tube) and the transformation to α-chitin occurs upon washing.[58,64] As shown in Figure a, poorly crystalline β-chitin (squid pen) was successfully
transformed to α-chitin by treating with HCl at 5 M and above.
The peaks centered at 2θ = 9.3° were indexed as reflections
from the (020) plane of α-chitin (Figure b). By using the α-chitin samples,
the validity of our EDA complexation method was examined (Figure c). Through the complexation
with EDA, the peak top position of β-chitin treated with 5,
6, 7, and 8 M HCl fell into 2θ = 6.9 and 7.4°, indicative
of poorly crystalline α-chitin or chitosan. Therefore, the allomorphs
were correctly identified with EDA complexation. It should be noted
that β-chitin treated with 5, 6, 7, and 8 M HCl showed a sharp
peak at 2θ = 26.3°, which is indicative
of α-chitin (the 0 1 3 diffraction), but this peak is not useful
in the determination of chitin allomorphs, since in 2θ = 20° and above the peaks of residual, insoluble inorganic
substances appear and blur the diffraction from chitin.[65]
Figure 5
(a) X-ray diffraction profiles of squid pen samples treated
with
0 (water), 4, 5, 6, 7, and 8 M HCl. Lines in red correspond to the
diffractions characteristic of α-chitin; (b) enlarged profiles
of Figure a. α,
βa, βm, and βd represent
the peak positions of α-chitin, anhydrous β-chitin, β-chitin
monohydrate, and β-chitin dihydrate from the literature data.[15,52,53] Colored dots represent the peak
top position of the profiles; (c) X-ray diffraction profiles of the
EDA complex of squid pen treated with 0 (water), 4, 5, 6, 7, and 8
M HCl. Shades denoted as α, *, and β are the same as in Figure . Colored dots represent
the peak top position of the profiles.
(a) X-ray diffraction profiles of squid pen samples treated
with
0 (water), 4, 5, 6, 7, and 8 M HCl. Lines in red correspond to the
diffractions characteristic of α-chitin; (b) enlarged profiles
of Figure a. α,
βa, βm, and βd represent
the peak positions of α-chitin, anhydrous β-chitin, β-chitin
monohydrate, and β-chitin dihydrate from the literature data.[15,52,53] Colored dots represent the peak
top position of the profiles; (c) X-ray diffraction profiles of the
EDA complex of squid pen treated with 0 (water), 4, 5, 6, 7, and 8
M HCl. Shades denoted as α, *, and β are the same as in Figure . Colored dots represent
the peak top position of the profiles.In addition to the acid treatment, alkaline treatment
was conducted
in order to examine the transformation from β-chitin to chitosan
through deacetylation (Figure a). By immersing in 12.5 M aqueous NaOH solution, the β-chitin
in siboglinid worm tubes gradually lost the DA and its high crystallinity,
and a new peak was observed at 2θ = 8.5°, which corresponded
to an unknown hydrate form of chitosan.[66] Judging only from Figure b, this transformation may be misinterpreted as from anhydrous
β-chitin to β-chitin monohydrate. However, the complexation
with EDA clearly showed the gradual disappearance of β-chitin
and the appearance of chitosan during the course of the alkaline treatment
(Figure c). A peak
from the diffraction of the (010) plane of the β-chitin/EDA
complex gradually diminished, and a new peak appeared at the 2θ = 6.9 and 7.4° position (marked with asterisk
in Figure ), indicative
of poorly crystalline α-chitin or chitosan. The transformation
from β-chitin to α-chitin or chitosan was complete at
6 h of immersion in 12.5 M NaOH solution, where the DA reached 80%,
in line with the literature data.[57] It
should be noted that due to the highly crystalline and rigid nature
of the siboglinid worm tube, swelling reaction by 12.5 M NaOH solution
was not homogeneous at 0.5 and 3 h immersion, and thus the DA of 0.5
and 3 h immersion in 12.5 M NaOH solution exhibited greater errors.
Figure 6
(a) X-ray
diffraction profiles of the siboglinid worm tube treated
with 12.5 M NaOH for 0 (water), 0.5, 3, and 6 h. The DA values indicate
the degrees of acetylation; (b) enlarged profiles of Figure a. α, βa, βm, and βd represent the peak
positions of α-chitin, anhydrous β-chitin, β-chitin
monohydrate, and β-chitin dihydrate from the literature data,[15,52,53] respectively. Colored dots represent
the peak top position of profiles; (c) X-ray diffraction profiles
of the EDA complex of the siboglinid worm tube treated with 12.5 M
NaOH for 0 (water), 0.5, 3, and 6 h. Shades denoted as α, *,
and β are the same as in Figure . Colored dots represent the peak top position of profiles.
(a) X-ray
diffraction profiles of the siboglinid worm tube treated
with 12.5 M NaOH for 0 (water), 0.5, 3, and 6 h. The DA values indicate
the degrees of acetylation; (b) enlarged profiles of Figure a. α, βa, βm, and βd represent the peak
positions of α-chitin, anhydrous β-chitin, β-chitin
monohydrate, and β-chitin dihydrate from the literature data,[15,52,53] respectively. Colored dots represent
the peak top position of profiles; (c) X-ray diffraction profiles
of the EDA complex of the siboglinid worm tube treated with 12.5 M
NaOH for 0 (water), 0.5, 3, and 6 h. Shades denoted as α, *,
and β are the same as in Figure . Colored dots represent the peak top position of profiles.The above-mentioned results confirmed the validity
of identification
of chitin allomorphs based on the complexation of chitin with EDA.
We then extended this EDA complexation method to chitin samples characterized
by nearly-amorphous, very poor crystallinity, including the α-chitin
planktic copepod exoskeletons (Pontella fera, Calanoida)[67] and the β-chitin scales of the Scaly-foot
Snail (Chrysomallon squamiferum).[65] For copepods (Figure ), the peak top position in the dry state
was between α-chitin and β-chitin monohydrate due to the
very poor crystallinity. However, EDA complexation revealed that copepod
exoskeletons consisted of poorly crystalline α-chitin or chitosan.
This is in line with copepods being a group of crustaceans which are
known to use α-chitin. For the Scaly-foot Snail, we used the
part of its scales close to the distal tip. As the scales show accretionary
growth in the longitudinal direction, the distal tip has been exposed
longest to the environment and the β-chitin would be more disordered
than freshly secreted parts near the base.[65] In Figure , the
peak position of scale samples complexed with EDA was located at the
border of the known peak position for β-chitin, identifying
it correctly as β-chitin. These examples exemplify that the
method proposed herein is capable of separating the chitin allomorphs
even when they are near-amorphous.
Figure 7
X-ray diffraction profiles of near-amorphous
α-chitin copepod
exoskeletons, those complexed with EDA, the near-amorphous β-chitin
Scaly-foot Snail scale (sampled position near the distal tip of the
scale), and the one complexed with EDA. α, βa, βm, and βd represent the peak
positions of α-chitin, anhydrous β-chitin, β-chitin
monohydrate, and β-chitin dihydrate from the literature data.[15,52,53] Shades denoted as α, *,
and β are the same as in Figure . Colored dots represent the peak top position of profiles.
The values in the brackets are the crystal size calculated from the
peaks at 2θ = 8.5–9.3° (diffraction of (020) planes
in α-chitin and diffraction of (010) planes in β-chitin).
X-ray diffraction profiles of near-amorphous
α-chitin copepod
exoskeletons, those complexed with EDA, the near-amorphous β-chitin
Scaly-foot Snail scale (sampled position near the distal tip of the
scale), and the one complexed with EDA. α, βa, βm, and βd represent the peak
positions of α-chitin, anhydrous β-chitin, β-chitin
monohydrate, and β-chitin dihydrate from the literature data.[15,52,53] Shades denoted as α, *,
and β are the same as in Figure . Colored dots represent the peak top position of profiles.
The values in the brackets are the crystal size calculated from the
peaks at 2θ = 8.5–9.3° (diffraction of (020) planes
in α-chitin and diffraction of (010) planes in β-chitin).
Conclusions
We successfully identified chitin allomorphs
in both highly and
poorly crystalline, even near-amorphous, chitin samples using a newly
developed method employing the chitin/EDA complex. The advantage of
this highly sensitive method is not only that the results are straightforward
to interpret, but also that the sample preparation process is simple:
simply immersing chitin into EDA at room temperature. Our method presents
a powerful tool for determining chitin allomorphs, especially in poorly
crystalline samples, and will pave the way to building an overarching
understanding of chitin biosynthesis along the phylogenetic tree of
chitin-producing organisms. A limitation is that poorly crystalline
α-chitin is difficult to separate from chitosan when using this
method only. For this, additional information such as the DA measured
by electric titration, FT-IR, or solid-state NMR is necessary.
Authors: Ahmet Kertmen; Iaroslav Petrenko; Christian Schimpf; David Rafaja; Olga Petrova; Viktor Sivkov; Sergey Nekipelov; Andriy Fursov; Allison L Stelling; Korbinian Heimler; Anika Rogoll; Carla Vogt; Hermann Ehrlich Journal: Int J Mol Sci Date: 2021-11-22 Impact factor: 5.923