Literature DB >> 36074180

Drilling accurate nanopores for biosensors by energetic multi-wall carbon nanotubes: a molecular dynamics investigation.

Changsheng Li1, Zilin Wang2, Lei Ma2.   

Abstract

Drilling precise nanopores in thin layers is in rapid demand for biosensing applications. We demonstrate that an energetic multi-wall carbon nanotube (MWCNT) can be a good candidate to fabricate nanopores on graphene from molecular dynamics simulations with a bond-order potential. High-quality nanopores with expected size and smooth margins could be created by an incident nanotube at chosen size and energy. Besides, a nanotube is in advantage of absorbing and translocating many biological macromolecules due to its strong adsorption capacity. It implies a feasible way to drill nanopores and carry big molecules through the fabricated nanopores in one step for fast biosensing applications.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Biosensing; Drilling; Molecular dynamics; Nanopore

Mesh:

Substances:

Year:  2022        PMID: 36074180     DOI: 10.1007/s00894-022-05276-8

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   2.172


  22 in total

1.  DNA translocation through graphene nanopores.

Authors:  Grégory F Schneider; Stefan W Kowalczyk; Victor E Calado; Grégory Pandraud; Henny W Zandbergen; Lieven M K Vandersypen; Cees Dekker
Journal:  Nano Lett       Date:  2010-08-11       Impact factor: 11.189

2.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

3.  Rapid fabrication of solid-state nanopores with high reproducibility over a large area using a helium ion microscope.

Authors:  Deying Xia; Chuong Huynh; Shawn McVey; Aaron Kobler; Lewis Stern; Zhishan Yuan; Xinsheng Sean Ling
Journal:  Nanoscale       Date:  2018-03-15       Impact factor: 7.790

4.  Monolayer WS2 Nanopores for DNA Translocation with Light-Adjustable Sizes.

Authors:  Gopinath Danda; Paul Masih Das; Yung-Chien Chou; Jerome T Mlack; William M Parkin; Carl H Naylor; Kazunori Fujisawa; Tianyi Zhang; Laura Beth Fulton; Mauricio Terrones; Alan T Charlie Johnson; Marija Drndić
Journal:  ACS Nano       Date:  2017-02-01       Impact factor: 15.881

5.  Nanopore based sequence specific detection of duplex DNA for genomic profiling.

Authors:  Alon Singer; Meni Wanunu; Will Morrison; Heiko Kuhn; Maxim Frank-Kamenetskii; Amit Meller
Journal:  Nano Lett       Date:  2010-02-10       Impact factor: 11.189

6.  Atomically thin molybdenum disulfide nanopores with high sensitivity for DNA translocation.

Authors:  Ke Liu; Jiandong Feng; Andras Kis; Aleksandra Radenovic
Journal:  ACS Nano       Date:  2014-02-18       Impact factor: 15.881

7.  Fast translocation of proteins through solid state nanopores.

Authors:  Calin Plesa; Stefan W Kowalczyk; Ruben Zinsmeester; Alexander Y Grosberg; Yitzhak Rabin; Cees Dekker
Journal:  Nano Lett       Date:  2013-01-29       Impact factor: 11.189

8.  Single-Molecule Discrimination of Labeled DNAs and Polypeptides Using Photoluminescent-Free TiO2 Nanopores.

Authors:  Rui Wang; Tal Gilboa; Jiaxi Song; Diana Huttner; Mark W Grinstaff; Amit Meller
Journal:  ACS Nano       Date:  2018-11-01       Impact factor: 15.881

9.  Nanopore sensing of individual transcription factors bound to DNA.

Authors:  Allison Squires; Evrim Atas; Amit Meller
Journal:  Sci Rep       Date:  2015-06-25       Impact factor: 4.379

10.  Probing DNA Translocations with Inplane Current Signals in a Graphene Nanoribbon with a Nanopore.

Authors:  Stephanie J Heerema; Leonardo Vicarelli; Sergii Pud; Raymond N Schouten; Henny W Zandbergen; Cees Dekker
Journal:  ACS Nano       Date:  2018-02-27       Impact factor: 15.881

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