Literature DB >> 36072155

Crystal structures and Hirshfeld surface analyses of hypoxanthine salts involving 5-sulfosalicylate and perchlorate anions.

Udhayasuriyan Sathya1, Jeyaraman Selvaraj Nirmalram1, Sundaramoorthy Gomathi2, Franc Perdih3, Samson Jegan Jennifer4, Ibrahim Abdul Razak4.   

Abstract

Two salts of 1,9-di-hydro-purin-6-one (hypoxanthine), namely, 6-oxo-1,9-di-hydro-purin-7-ium 5-sulfosalicylate dihydrate, C5H5N4O+·C7H5O6S-·2H2O, (I), and 6-oxo-1,9-di-hydro-purin-7-ium perchlorate monohydrate, C5H5N4O+·ClO4 -·H2O, (II), have been synthesized and characterized using single-crystal X-ray diffraction and Hirshfeld analysis. In both salts, the hypoxanthine mol-ecule is protonated at the N7 position of the purine ring. In salt (I), the cation and anion are connected through N-H⋯O inter-actions. The protonated hypoxanthine cations of salt (I) form base pairs with another symmetry-related hypoxanthine cation through N-H⋯O hydrogen bonds with an R 2 2(8) ring motif, while in salt (II), the hypoxanthine cations are paired through a water mol-ecule via N-H⋯O and O-H⋯N hydrogen bonds with an R 3 3(11) ring motif. The packings within the crystal structures are stabilized by π-π stacking inter-actions in salt (I) and C-O⋯π inter-actions in salt (II). The combination of several inter-actions leads to the formation of supra-molecular sheets extending parallel to (010) in salts (I) and (II). Hirshfeld surface analysis and fingerprint plots reveal that O⋯H/H⋯O contacts play the major role in the crystal packing of each of the salts, with a 54.1% contribution in salt (I) and 62.3% in salt (II). © Sathya et al. 2022.

Entities:  

Keywords:  Hirshfeld surface analysis; crystal structure; hydrogen bonding; hypoxanthine

Year:  2022        PMID: 36072155      PMCID: PMC9431789          DOI: 10.1107/S2056989022004753

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

1,9-Di­hydro­purin-6-one (hypoxanthine, C5H4N4O), a notable purine-based nucleotide (Emel’yanenko et al., 2017 ▸), is present in the anti­codon as nucleoside inosine in t-RNA (Costas & Acevedo-Chávez, 1997 ▸; Holley et al., 1965 ▸; Stryer, 1988 ▸; Plekan et al., 2012 ▸; Hughes, 1981 ▸; Schmalle et al., 1988 ▸). Hypoxanthine and xanthine are significant as drugs in the treatment of infections like gout and xanthinuria. Hypoxanthine is additionally utilized against hypoxia and is known to repress the impact of few medications (Dubler et al., 1987a ▸,b ▸; Biradha et al., 2010 ▸). Hypoxanthine (HX), a potential oxygen-free radical generator, is a strong agent against cancer cells (Susithra et al., 2018 ▸; Latosińska et al., 2014 ▸; Rutledge et al., 2007 ▸). The presence of the imine group in its structure is responsible for its pharmacological activity. Hypoxanthine can exist in two stable tautomers, viz. as the oxo-N7(H) form and as the oxo-N9(H) form. When hypoxanthine inter­acts with strong acids, it becomes protonated at position N7 or N9. A limited number of hypoxanthine salts like hypoxanthine nitrate (Cabaj & Dominiak, 2021 ▸; Cabaj et al., 2019 ▸) and hypoxanthine hydro­chloride monohydrate (Sletten & Jensen, 1969 ▸) have been reported so far in the literature. The current article reports the crystal structures of hypoxanthinium 5-sulfosalicylate dihydrate, (I), and hypoxan­thin­ium perchlorate monohydrate, (II), salts and the noncovalent inter­actions that govern their crystal packings.

Structural commentary

Salt (I) crystallizes with two hypoxanthinium cations (A+ and B+), two 5-sufosalicylate anions (5SCA−; A and B) and four solvent water mol­ecules (O1W, O2W, O3W and O4W) in the asymmetric unit, as shown in Fig. 1 ▸. In salt (I), the B cation is equally disordered over two sets of sites for atoms C5B/C5C, C6B/C6C and O6B/O6C. Atoms H1B/H1C and H7B/H7C attached to N1B and N7B, respectively, are also disordered. The solvent water mol­ecule O3W is also disordered over two positions. Atoms N7A and N7B are protonated, which is confirmed by widening of the C5A—N7A—C8A angle to 107.1 (4)° compared to the value of 103.8° in the two polymorphic forms of the neutral HX mol­ecule (Schmalle et al., 1988 ▸; Yang & Xie, 2007 ▸); the situation for C5B—N7B—C8B is less clear due to the observed disorder. The torsion angles of N3A—C4A—C5A—N7A = −179.2 (4)° and N3B—C4B—C5C—N7B = −178.3 (6)° are similar to those of the two forms of the neutral HX mol­ecule (−179.55 and −178.99°; Schmalle et al., 1988 ▸; Yang & Xie, 2007 ▸). The carb­oxy­lic acid group in each of the two 5SCA− anions is coplanar with the benzene ring [O7A—C9A—C10A—C11A = −178.2 (4)° and O7B—C9B—C10B—C11B = 175.9 (4)°], a situation that is likewise observed for previously reported crystal structures involving 5SCA− anions.
Figure 1

The asymmetric unit of salt (I), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Dashed lines indicate hydrogen bonding and the disorder of cation B+ is shown.

Salt (II) crystallizes with one hypoxanthinium cation, one perchlorate anion (PCA−) and one solvent water mol­ecule in the asymmetric unit. The mol­ecular structure of salt (II) is shown in Fig. 2 ▸. Again, the N7 atom of the purine ring is protonated, as confirmed by the widening of the C5—N7—C8 angle to 108.00 (12)°. The N3—C4—C5—N7 torsion angle of 179.34 (14)° is similar to the values determined for salt (I). The PCA− anion has the characteristic tetra­hedral shape, with Cl—O bond lengths between 1.4116 (15) and 1.4421 (15) Å, and O—Cl—O angles between 108.29 (9) and 111.24 (12)°.
Figure 2

The asymmetric unit of salt (II), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Dashed lines indicate hydrogen bonding.

Supra­molecular features

In the crystal structure of salt (I), (010) sheets of cations and sheets of anions are stacked alternately along [010]. The crystal packing is governed by N—H⋯O, O—H⋯N and C—H⋯O hydrogen bonds (Table 1 ▸). Symmetry-related A+ cations inter­act through a pair of N1A—H1A⋯O6A hydrogen bonds with a robust (8) motif (Bernstein et al., 1995 ▸; Motherwell et al., 2000 ▸). Solvent water mol­ecule OW1 connects the A+ cation via N7A—H7A⋯O1W and O1W—H1WA⋯O6A hydrogen bonds with an (14) motif. The A+ cations are further connected via C2A—H2A⋯O1W, C8A—H8A⋯O2W, N9A—H9A⋯O2W and O2W—H2WA⋯N3A, N1A—H1A⋯O6A hydrogen bonds with (7), (14), (10) and (10) motifs (Fig. 3 ▸).
Table 1

Hydrogen-bond geometry (Å, °) for (I)

D—H⋯A D—HH⋯A DA D—H⋯A
N7B—H7B⋯O3WA i 0.862.263.08158
O7A—H7D⋯O10A ii 0.821.862.677170
O7B—H7E⋯O10B i 0.821.842.655175
O9A—H9D⋯O12B ii 0.822.342.924128
O9B—H9E⋯O12A iii 0.822.543.143131
O1W—H1WA⋯O6A iv 0.852.312.801117
O1W—H1WA⋯O10B iv 0.852.282.917132
N9B—H9B⋯O6B v 0.862.423.044130
N9B—H9B⋯O3WA vi 0.862.473.07128
N1A—H1A⋯O6A vii 0.862.052.898170
N1B—H1C⋯O4W 0.862.222.890135
N1B—H1C⋯O11A 0.862.452.998122
O1W—H1WB⋯O12B 0.852.012.844169
O2W—H2WA⋯N3A 0.832.072.849157
O2W—H2WB⋯O12A 0.822.032.815160
N7A—H7A⋯O1W 0.861.772.615168
N9A—H9A⋯O2W 0.861.892.697157
C2A—H2A⋯O1W ii 0.932.433.149134
C2B—H2B⋯O11A 0.932.462.974114
C8A—H8A⋯O2W viii 0.932.403.310167
C15B—H15B⋯O9A 0.932.593.510172

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

Figure 3

The crystal packing of (I), showing the N—H⋯O and O—H⋯O ring motifs formed between the A+ cation and water mol­ecules.

The B+ cations inter­act with the O atom of the solvent water mol­ecules O3W and O4W through N1B—H1C⋯O4W and N9B—H9B⋯O3WA, and with N9B—H9B⋯O6B with an (7) motif. Short O3WA⋯O4W contacts with an (20) motif are also observed (Fig. 4 ▸). Furthermore, the two 5SCA− anions (A and B) self assemble into sheets by inter­action of symmetry-related counterparts through O7A—H7D⋯O10A and O7B—H7E⋯O10B, respectively (Fig. 5 ▸). A and B sheets are inter­connected through O9B—H9E⋯O12A and through O9A—H9D⋯O12B and C15B—H15B⋯O9A inter­actions, resulting in (7), (23) and (26) ring motifs. Moreover, cation B+ inter­acts with 5SCA− (A) via N1B—H1C⋯O11A and C2B—H2B⋯O11A with an (5) motif. Another inter­connection between cationic and anionic sheets involves the solvent water mol­ecules through O1W—H1WA⋯O10B, O1W—H1WB⋯O12B, O2W—H2WA⋯N3A and O2W—H2WB⋯O12A (Fig. 6 ▸).
Figure 4

The crystal packing of (I), showing the N—H⋯O and O—H⋯O ring motifs formed between the B+ cation and (disordered) water mol­ecules.

Figure 5

The supra­molecular layer of assembled 5SCA− anions in salt (I).

Figure 6

The alternating arrangement of cationic and anionic sheets in salt (I).

The crystal structure of (I) is consolidated by π–π inter­actions between the phenyl rings of the two 5SCA anions (C10A–C15A and C10B–C15B), and the imidazole ring (C4A–N9A) and the pyrimidine ring (N1A–C6A) of cation A+, with centroid-to-centroid distances of 3.547 (3), 3.562 (3), 3.554 (3) and 3.533 (3) Å, and slippages of 0.815, 1.300, 1.182 and 1.105 Å (Fig. 7 ▸).
Figure 7

π–π stacking inter­actions in (I) between the imidazole and pyrimidine rings of the cations and the phenyl rings of the anions.

In the crystal structure of salt (II), (010) sheets of cations and sheets of anions are stacked alternately along [010]. The crystal packing of salt (II) is dominated by N—H⋯O and O—H⋯O hydrogen bonds, and to a minor extent by C—H⋯O hydrogen bonds (Table 2 ▸). The protonated N atom of the cation forms an N7—H7⋯O1W ii hydrogen bond with the O atom of the water mol­ecule. The water mol­ecule disrupts the formation of base pairs but connects symmetry-related cations through O1W—H2W⋯N3iv. Additional N9—H9⋯O6iii inter­actions with an (11) ring motif generate a cationic strand along [201]. Parallel cationic strands are connected through the solvent water mol­ecule and the PCA− anion through O1W—H1W⋯O3 and bifurcated N1—H1⋯O4 and N1—H1⋯O5 inter­actions, respectively, forming (9), (14) and (20) motifs. The crystal packing of salt (II) is shown in Fig. 8 ▸. The crystal structure is further stabilized by carbon­yl⋯π (π refers to the ring system of the cation) inter­actions, with distances of 3.6097 (13), 3.2983 (13), 3.4580 (13) and 3.7236 (14) Å (Fig. 9 ▸).
Table 2

Hydrogen-bond geometry (Å, °) for (II)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O40.822.603.249138
N1—H1⋯O50.822.092.879162
N7—H7⋯O2i 0.912.603.031110.2
N7—H7⋯O1W ii 0.911.762.6489165
N9—H9⋯O6iii 0.841.932.7602166
O1W—H1W⋯O3iv 0.852.173.018172
O1W—H2W⋯N30.852.112.951172
C8—H8⋯O2i 0.932.472.970114
C8—H8⋯O3iii 0.932.473.268144
C8—H8⋯O4iii 0.932.553.072116

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Figure 8

A view of the supra­molecular arrangement involving hydrogen-bonded rings in salt (II).

Figure 9

A view of the PCA− anions and water mol­ecules connecting sheets through O—H⋯O hydrogen bonds and a view of the C—O⋯π inter­actions (π = imidazole and pyrimidine rings of the cation) in salt (II). [Symmetry codes: (i) −x + 2, y −  , −z +  ; (ii) x + 1, −y +  , z −  .]

Hirshfeld surface analysis

Hirshfeld surface (HS) analyses of salts (I) and (II) were performed using CrystalExplorer17 (Turner et al., 2017 ▸). The results of the HS analysis mapped over d norm are shown in Figs. 10 ▸(a) and 10(b) for (I) and (II), respectively. Corresponding two-dimensional fingerprint plots (Spackman & Jayatilaka, 2009 ▸) for (I) and (II) are shown in Figs. 11 ▸ and 12 ▸, respectively. The contributions of the noncovalent inter­actions to the HS in the two salts are: O⋯H/H⋯O 54.1% (I), 62.3% (II); N⋯H/H⋯N 3.1% (I), 6.8% (II); C⋯H/H⋯C 5.9% (I), 5.4% (II); H⋯H/H⋯H 16.0% (I), 5.3% (II); C⋯C/C⋯C 0.9% (I), 0.1% (II).
Figure 10

Hirshfeld surface for salts (a) (I) and (b) (II) mapped over d norm.

Figure 11

Fingerprint plots of salt (I) showing all inter­molecular inter­actions and delineated into O⋯H/H⋯O, H⋯N/N⋯H, C⋯O, C⋯N, C⋯H/H⋯C and H⋯H contacts.

Figure 12

Fingerprint plots of salt (II) showing all inter­molecular inter­actions and delineated into O⋯H/H⋯O, H⋯N/N⋯H, C⋯O, C⋯H/H⋯C and H⋯H contacts.

Comparison with the structures of related compounds

Crystal data, supra­molecular inter­actions and hydrogen bonding motifs of structurally similar halide/nitrate/phosphite/phosphate/perchlorate or sulfate salts like guanidinium bro­mide (Wei, 1977 ▸), guanidinium chloride (Maixner & Zachová, 1991 ▸), bis­(guanidinium) hydrogen phosphate 2.5-hydrate (Low et al., 1986 ▸), guanidinium phosphite (Bendeif et al., 2007 ▸), guanidinium sulfate (Cherouana et al., 2003 ▸), guanidinium dinitrate dihydrate (Bouchouit et al., 2002 ▸), xanthinium nitrate, xanthinium sulfate (Sridhar, 2011 ▸), xanthinium perchlorate dihydrate (Biradha et al., 2010 ▸), hypoxanthinium chloride monohydrate (Sletten & Jensen, 1969 ▸) and hypoxanthinium nitrate monohydrate (Cabaj et al., 2019 ▸) are listed and compared in Table 3 ▸.
Table 3

Comparison of salt forms of purine derivatives containing halides/nitrate/phosphite/phosphate/sulfate and perchlorates as anions

CompoundSpace groupPrimary inter­action betweenGraph-set motifMotif typeSecondary inter­action betweenGraph-set motifMotif type 
Guanidinium hydro­chlorideMonoclinic P21/c,N—H⋯N, (8),IV and VN—H⋯Cl, (8),XII and XIII 
  a = 4.479 ÅN—H⋯O (10) C—H⋯Cl, (11)  
  b = 9.995 Å   O—H⋯N,   
  c = 19.304 Å   O—H⋯Cl   
 β = 107.90°       
Guanidinium hydro­bromideMonoclinic P21/c N—H⋯N, (8),IV and VN—H⋯Br, (8),XII and XIII 
  a = 4.8708 ÅN—H⋯O (10) N—H⋯N, (11)  
  b = 13.237 Å   O—H⋯Br,   
  c = 14.638 Å   C—H⋯Br   
 β = 93.906°       
Guanidinium dinitrate dihydrateMonoclinic P21/c N—H⋯O (8)VN—H⋯O, (12)XII 
  a = 6.6340 Å   O—H⋯O   
  b = 10.2020 Å       
  c = 11.0440 Å       
 β = 106.04°       
Guanidinium phosphite monohydrateMonoclinic P21/c N—H⋯N (8)IVN—H⋯O (6),XII and XVIII 
  a = 4.9700 Å     (10)  
  b = 12.7506 Å       
  c = 15.0499 Å       
 β = 92.293°       
Guanidinium phosphite dihydrate form (I)Monoclinic P21/c N—H⋯N (8)IVN—H⋯N, (8),XIII and XVIII 
  a = 4.6812 Å   N—H⋯O (6)  
  b = 24.0561 Å       
  c = 9.5186 Å       
 β = 99.773°       
Guanidinium phosphite dihydrate form (II)Monoclinic P21/c N—H⋯N (8)IVN—H⋯N, (8),XIII and XVIII 
  a = 4.7340 Å   N—H⋯O (6)  
  b = 24.0450 Å       
  c = 9.5050 Å       
 β = 98.860°       
Guanidinium phosphate hydrate form (I)Triclinic, P N—H⋯N (8)IVN—H⋯O, (9)XVI and XVII 
  a = 9.607 Å   O—H⋯O (10)  
  b = 10.221 Å       
  c = 10.603 Å       
 α = 84.5°       
 β = 108.2°       
 γ = 119.7°       
Guanidinium phosphate monohydrate form (II)Monoclinic P21/n N—H⋯N (8)IVN—H⋯O, (8),VI, XIII and XVI 
  a = 4.5414 Å   O—H⋯O (8),  
  b = 12.5774 Å     (9)  
  c = 18.1485 Å       
 β = 93.689 °       
Guanidinium sulfate monohydrateMonoclinic P21/c N—H⋯O (8)VIN—H⋯O, (12)XV 
  a = 8.9940 Å   O—H⋯O   
  b = 10.2020 Å       
  c = 11.0440 Å       
 β = 106.04°       
Xanthinium nitrate monohydrateTriclinic, P N—H⋯O (8)IO—H⋯N, (4),VIII, XI and XIII 
  a = 5.0416 Å   O—H⋯O (8),  
  b = 7.4621 Å     (14)  
  c = 12.1396 Å       
 α = 80.248°       
 β = 80.800°       
 γ = 75.657°       
Xanthinium sulfate monohydrateMonoclinic P21 N—H⋯O (8)IO—H⋯N, (8)XIII 
  a = 5.183 Å       
  b = 24.805 Å       
  c = 7.701 Å       
 β = 103.510°       
Xanthinium perchlorate dihydrateTriclinic, P N—H⋯O (8)IO—H⋯N, (8)XIII 
  a = 5.1625 Å   O—H⋯O   
  b = 7.7449 Å       
  c = 13.696 Å       
 α = 100.214°       
 β = 91.591°       
 γ = 100.880°       
Hypoxanthinium hydro­chloride monohydrateMonoclinic P21/c N—H⋯Cl (9)IIIN—H⋯Cl, (11),IX, X and XI 
  a = 4.8295 Å   C—H⋯Cl, (16),  
  b = 17.7285 Å   O—H⋯N, (14)  
  c = 9.0077 Å   O—H⋯Cl   
 β = 94.59°       
Hypoxanthinium nitrate monohydrate form (I)Ortho­rhom­bic Pnma N—H⋯O (8)IIN—H⋯O, (6),XIII and XIV 
  a = 13.701 Å   O—H⋯O, (8),  
  b = 6.236 Å     (20)  
  c = 10.078 Å       
Hypoxanthinium nitrate monohydrate form (II)Monoclinic P21/n N—H⋯O (8)IIN—H⋯O, (6),XIII and XIV 
  a = 6.1452 Å   O—H⋯O, (8)  
  b = 13.7517 Å       
  c = 10.0414 Å       
 β = 95.601°       
A comparison of salts (I) and (II) with the related salt forms of guanine, xanthinium and hypoxanthine reveal that, in most of the crystal structures containing purine derivatives, the purine forms base pairs through pairs of N—H⋯O or N—H⋯N hydrogen bonds with an (8) primary ring motif. When it comes to an inter­action between the purine base and a strong acid, the chloride/nitrate/sulfate/phosphite/phosphate or perchlorate salts of guanine/xanthine and hypoxanthine have different mol­ecular recognition patterns. The most important primary and secondary motifs formed by hypoxanthine and similar compounds are summarized in Figs. 13 ▸ and 14 ▸. Crystallographic studies of salts involving perchlorate and sulfate anions reveal that most of these salts have similar crystal packing arrangements (Bishop et al., 2014 ▸). In general, salts of structurally similar systems will have similar mol­ecular recognition patterns and supra­molecular motifs. However, for salts (I) and (II) and related systems compiled in Table 3 ▸, great similarities are not observed. The differences in mol­ecular recognition and supra­molecular self-assembly might be due to the involvement of other functional groups or substituents in the structures, the intrusion of water mol­ecules in the crystal structure, or the ratio of anions and cations present in the asymmetric unit.
Figure 13

Primary ring motifs observed in purine derivatives.

Figure 14

Secondary ring motifs observed in purine derivatives.

Synthesis and crystallization

Salt (I) was synthesized by mixing an equimolar ratio of hypoxanthine (0.0340 g) and 5-sulfosalicylic acid (0.0545 g) in hot water. The solution was heated to 333 K for 1 h and then allowed to cool slowly to room tem­per­ature. Colourless needle-shaped crystals were harvested from the mother liquid after one week. Salt (II) was synthesized by mixing an equimolar ratio of hypoxanthine (0.0340 g) and iron perchlorate monohydrate (0.0681 g) in hot water. The solution was heated to 333 K with constant stirring for 1 h and then allowed to cool slowly to room tem­per­ature. Colourless plate-like crystals were harvested from the mother liquid after one week.

Refinement

Crystal data, data collection and structure refinement details of salts (I) and (II) are summarized in Table 4 ▸. In salt (I), carbon (C5 and C6) and oxygen (O6) atoms of cation B are equally disordered over two sets of sites, with a refined occupancy ratio of 0.503 (18):0.497 (18). The solvent water mol­ecule O3W is disordered over two positions, with a refined site-occupancy ratio of 0.58 (6):0.42 (6). The H atoms of water mol­ecules O1W and O2W were located from a difference Fourier map, and the O—H distance restrained to 0.82 Å. Attempts to localize the H atoms of O3W and O4W in (I) from difference Fourier maps failed as there were no relevant electron densities close to these atoms. Hence, these H atoms are not part of the model but are included in the formula. All C- and N-bound H atoms in (I) were placed in idealized positions and refined freely using a riding model, with C—H = 0.95 Å and N—H = 0.86 Å, and with U iso(H) = 1.2U eq(C,N). In salt (II), the N-bound H atoms were located in a difference Fourier map and refined freely. The H atoms of the water mol­ecule were likewise located from a difference Fourier map. The geometry of the water mol­ecule was restrained using DFIX commands with an O—H distance of 0.85 Å and an H⋯H distance of 1.36 Å. All C-bound H atoms were treated as for salt (I).
Table 4

Experimental details

 (I)(II)
Crystal data
Chemical formulaC5H5N4O+·C7H5O6S·2H2OC5H5N4O+·ClO4 ·H2O
M r 388.32254.60
Crystal system, space groupMonoclinic, P21/c Monoclinic, P21/c
Temperature (K)293296
a, b, c (Å)8.7055 (3), 25.9927 (13), 13.6479 (5)5.0307 (6), 20.386 (2), 9.0181 (10)
β (°)91.864 (3)94.233 (2)
V3)3086.6 (2)922.33 (18)
Z 84
Radiation typeMo KαMo Kα
μ (mm−1)0.270.44
Crystal size (mm)0.55 × 0.20 × 0.100.45 × 0.02 × 0.003
 
Data collection
DiffractometerBruker APEXII CCDBruker APEXII CCD
Absorption correctionMulti-scan (SADABS; Bruker, 2016)
T min, T max 0.957, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections21075, 7079, 590516360, 2752, 2370
R int 0.0320.025
(sin θ/λ)max−1)0.6490.711
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.087, 0.190, 1.220.038, 0.111, 1.05
No. of reflections70792752
No. of parameters521165
No. of restraints23
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.74, −0.430.37, −0.29

Computer programs: APEX2 and SAINT (Bruker, 2016 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL (Sheldrick, 2015b ▸), Mercury (Macrae et al., 2020 ▸), POVRay (Cason, 2004 ▸), PLATON (Spek, 2020 ▸) and publCIF (Westrip, 2010 ▸).

Crystal structure: contains datablock(s) I, II, global. DOI: 10.1107/S2056989022004753/wm5640sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989022004753/wm5640Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989022004753/wm5640IIsup3.hkl CCDC references: 2170315, 2170314 Additional supporting information: crystallographic information; 3D view; checkCIF report
C5H5N4O+·C7H5O6S·2H2OF(000) = 1600
Mr = 388.32Dx = 1.671 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.7055 (3) ÅCell parameters from 7079 reflections
b = 25.9927 (13) Åθ = 2.8–27.5°
c = 13.6479 (5) ŵ = 0.27 mm1
β = 91.864 (3)°T = 293 K
V = 3086.6 (2) Å3Needle, colourless
Z = 80.55 × 0.20 × 0.10 mm
Bruker APEXII CCD diffractometerRint = 0.032
φ and ω scansθmax = 27.5°, θmin = 2.9°
21075 measured reflectionsh = −11→11
7079 independent reflectionsk = −23→33
5905 reflections with I > 2σ(I)l = −17→17
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.087w = 1/[σ2(Fo2) + (0.0167P)2 + 13.1153P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.190(Δ/σ)max < 0.001
S = 1.22Δρmax = 0.74 e Å3
7079 reflectionsΔρmin = −0.43 e Å3
521 parametersExtinction correction: SHELXL (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
2 restraintsExtinction coefficient: 0.0013 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O6A0.1947 (4)0.49617 (15)0.5394 (2)0.0415 (8)
N1A−0.0096 (4)0.49891 (15)0.6407 (3)0.0312 (8)
H1A−0.0721220.4976380.5906940.037*
N3A0.0062 (4)0.50335 (15)0.8125 (3)0.0311 (8)
N7A0.3886 (4)0.49922 (15)0.7338 (3)0.0321 (8)
H7A0.4598230.4978460.6916260.038*
N9A0.2725 (4)0.50320 (16)0.8730 (3)0.0331 (9)
H9A0.2577400.5048290.9348760.040*
C2A−0.0710 (5)0.50158 (18)0.7299 (3)0.0325 (10)
H2A−0.1775760.5021970.7323240.039*
C4A0.1607 (5)0.50245 (17)0.8000 (3)0.0263 (9)
C5A0.2318 (4)0.50003 (17)0.7134 (3)0.0261 (9)
C6A0.1473 (5)0.49805 (18)0.6231 (3)0.0287 (9)
C8A0.4084 (5)0.50097 (19)0.8307 (3)0.0355 (10)
H8A0.5031780.5006830.8642220.043*
N1B0.7702 (5)0.25698 (19)0.9705 (5)0.0620 (15)
H1C0.6898660.2589411.0054450.074*0.497 (18)
H1B0.7165860.2585131.0223120.074*0.503 (18)
C2B0.7345 (7)0.2589 (2)0.8774 (6)0.0581 (16)
H2B0.6318790.2624540.8573290.070*
N3B0.8390 (5)0.25613 (17)0.8117 (3)0.0445 (10)
C4B0.9779 (5)0.25070 (18)0.8592 (3)0.0331 (10)
O6B0.9419 (18)0.2493 (6)1.1190 (8)0.054 (3)0.497 (18)
C5C1.0267 (15)0.2496 (4)0.9577 (8)0.035 (3)0.497 (18)
C6B0.9094 (14)0.2524 (4)1.0314 (7)0.035 (3)0.497 (18)
O6C1.0195 (19)0.2484 (6)1.1206 (10)0.062 (3)0.503 (18)
C5B0.9336 (17)0.2513 (4)0.9552 (8)0.040 (3)0.503 (18)
C6C1.0442 (17)0.2479 (4)1.0326 (7)0.048 (4)0.503 (18)
N7B1.1875 (6)0.2444 (2)0.9780 (5)0.0680 (16)
H7B1.2419710.2428641.0316660.082*0.497 (18)
H7C1.2677260.2431411.0164230.082*0.503 (18)
C8B1.2225 (7)0.2428 (2)0.8848 (6)0.0565 (16)
H8B1.3242950.2391390.8673830.068*
N9B1.1141 (5)0.24629 (17)0.8172 (4)0.0479 (11)
H9B1.1278570.2458440.7550810.058*
O3WA0.367 (4)0.2714 (4)1.1689 (17)0.063 (5)0.58 (6)
O3WB0.296 (4)0.2700 (6)1.1468 (11)0.043 (6)0.42 (6)
S1A0.40654 (12)0.36757 (5)0.96698 (8)0.0300 (3)
O7A−0.1915 (4)0.38972 (17)0.9153 (3)0.0473 (10)
H7D−0.2842610.3943800.9193810.071*
O8A−0.2547 (4)0.38674 (17)0.7567 (3)0.0489 (10)
O9A−0.0354 (4)0.37374 (16)0.6296 (2)0.0453 (9)
H9D−0.1232610.3801420.6458750.068*
O10A0.5153 (4)0.40963 (14)0.9514 (3)0.0386 (8)
O11A0.4769 (4)0.31756 (14)0.9629 (3)0.0467 (9)
O12A0.3208 (4)0.37511 (15)1.0554 (2)0.0429 (9)
C9A−0.1574 (5)0.38438 (18)0.8225 (3)0.0309 (9)
C10A0.0083 (5)0.37720 (17)0.8061 (3)0.0295 (9)
C11A0.0590 (5)0.37254 (18)0.7101 (3)0.0322 (10)
C12A0.2158 (5)0.3673 (2)0.6944 (4)0.0381 (11)
H12A0.2501920.3644240.6308520.046*
C13A0.3201 (5)0.36641 (19)0.7726 (3)0.0352 (10)
H13A0.4245670.3632450.7614670.042*
C14A0.2696 (5)0.37022 (17)0.8681 (3)0.0299 (9)
C15A0.1145 (5)0.37553 (17)0.8842 (3)0.0287 (9)
H15A0.0809050.3780030.9480390.034*
S1B0.56102 (12)0.37011 (5)0.45829 (9)0.0341 (3)
O7B1.1577 (4)0.38612 (17)0.4147 (2)0.0443 (9)
H7E1.2483910.3945760.4187880.066*
O8B1.2092 (4)0.37883 (17)0.2566 (3)0.0497 (10)
O9B0.9832 (4)0.36982 (17)0.1295 (2)0.0492 (9)
H9E1.0735330.3691360.1484630.074*
O10B0.4520 (4)0.41174 (15)0.4380 (3)0.0465 (9)
O11B0.4889 (4)0.31994 (16)0.4549 (3)0.0542 (10)
O12B0.6496 (4)0.37900 (17)0.5491 (3)0.0509 (10)
C9B1.1165 (5)0.37948 (18)0.3224 (3)0.0317 (10)
C10B0.9504 (5)0.37406 (17)0.3041 (3)0.0280 (9)
C11B0.8925 (5)0.37007 (18)0.2071 (3)0.0333 (10)
C12B0.7338 (6)0.3667 (2)0.1889 (4)0.0405 (11)
H12B0.6951900.3637370.1247810.049*
C13B0.6350 (5)0.36764 (19)0.2646 (4)0.0365 (11)
H13B0.5295540.3659680.2516420.044*
C14B0.6914 (5)0.37113 (17)0.3618 (3)0.0287 (9)
C15B0.8480 (5)0.37456 (16)0.3811 (3)0.0269 (9)
H15B0.8853720.3772140.4455310.032*
O1W0.6140 (4)0.48175 (16)0.6162 (2)0.0449 (9)
H1WA0.6058420.5030250.5690010.067*
H1WB0.6130010.4524090.5887980.067*
O2W0.2476 (4)0.48039 (15)1.0649 (3)0.0412 (8)
O4W0.6239 (8)0.2277 (2)1.1488 (4)0.100 (2)
H2WA0.161 (5)0.487 (4)1.082 (7)0.150*
H2WB0.270 (12)0.4502 (13)1.075 (8)0.150*
U11U22U33U12U13U23
O6A0.0336 (17)0.066 (2)0.0244 (16)−0.0003 (17)0.0008 (13)−0.0022 (16)
N1A0.0239 (18)0.041 (2)0.0279 (19)0.0016 (16)−0.0058 (14)−0.0027 (17)
N3A0.0270 (18)0.040 (2)0.0268 (19)0.0015 (16)0.0048 (15)0.0003 (16)
N7A0.0220 (17)0.045 (2)0.0296 (19)0.0007 (16)0.0021 (14)0.0066 (17)
N9A0.0300 (19)0.049 (2)0.0205 (17)0.0018 (17)−0.0007 (14)0.0037 (17)
C2A0.026 (2)0.036 (2)0.036 (2)0.0014 (18)0.0062 (18)−0.002 (2)
C4A0.028 (2)0.031 (2)0.0198 (19)0.0007 (17)0.0007 (16)0.0010 (17)
C5A0.0191 (18)0.036 (2)0.023 (2)0.0006 (17)0.0023 (15)0.0005 (18)
C6A0.030 (2)0.034 (2)0.023 (2)−0.0007 (18)0.0008 (16)0.0000 (18)
C8A0.025 (2)0.047 (3)0.034 (2)−0.003 (2)0.0002 (18)0.007 (2)
N1B0.034 (2)0.046 (3)0.106 (5)0.002 (2)0.006 (3)−0.012 (3)
C2B0.046 (3)0.044 (3)0.086 (5)0.003 (3)0.017 (3)−0.002 (3)
N3B0.037 (2)0.043 (2)0.052 (3)0.0017 (19)−0.008 (2)0.003 (2)
C4B0.038 (2)0.029 (2)0.032 (2)0.0005 (19)0.0027 (19)0.0034 (19)
O6B0.058 (7)0.077 (7)0.026 (4)−0.009 (7)−0.003 (5)−0.003 (4)
C5C0.023 (6)0.030 (5)0.051 (7)0.004 (4)−0.005 (5)−0.003 (4)
C6B0.052 (8)0.034 (5)0.020 (5)−0.003 (5)−0.004 (4)−0.001 (4)
O6C0.061 (8)0.081 (7)0.044 (6)−0.014 (8)−0.012 (6)0.009 (5)
C5B0.040 (8)0.031 (5)0.048 (7)−0.006 (5)0.001 (5)−0.001 (5)
C6C0.094 (12)0.032 (5)0.018 (5)−0.013 (6)0.020 (5)0.004 (4)
N7B0.041 (3)0.047 (3)0.115 (5)−0.003 (2)−0.009 (3)0.002 (3)
C8B0.035 (3)0.044 (3)0.089 (5)0.005 (2)−0.015 (3)−0.004 (3)
N9B0.047 (3)0.044 (3)0.053 (3)−0.004 (2)0.011 (2)−0.008 (2)
O3WA0.054 (12)0.070 (6)0.065 (7)−0.018 (5)0.002 (9)0.012 (5)
O3WB0.039 (13)0.056 (6)0.032 (6)0.001 (6)−0.005 (5)−0.005 (5)
S1A0.0190 (5)0.0406 (6)0.0304 (5)0.0041 (4)0.0014 (4)0.0024 (5)
O7A0.0204 (15)0.082 (3)0.0395 (19)0.0058 (18)0.0025 (14)0.0025 (19)
O8A0.0254 (16)0.081 (3)0.040 (2)0.0042 (17)−0.0062 (14)0.0015 (19)
O9A0.0374 (19)0.064 (2)0.0339 (18)0.0009 (19)−0.0081 (15)0.0020 (18)
O10A0.0233 (15)0.048 (2)0.045 (2)−0.0038 (14)−0.0008 (14)0.0051 (16)
O11A0.0363 (19)0.045 (2)0.058 (2)0.0119 (16)−0.0007 (17)0.0030 (18)
O12A0.0297 (17)0.066 (2)0.0331 (18)0.0037 (17)0.0043 (14)0.0005 (17)
C9A0.024 (2)0.036 (2)0.033 (2)−0.0022 (18)−0.0001 (17)0.0048 (19)
C10A0.0214 (19)0.029 (2)0.038 (2)0.0005 (17)0.0022 (17)0.0051 (19)
C11A0.032 (2)0.031 (2)0.033 (2)0.0002 (19)−0.0038 (18)0.0015 (19)
C12A0.036 (2)0.048 (3)0.031 (2)0.001 (2)0.0036 (19)−0.001 (2)
C13A0.024 (2)0.044 (3)0.038 (2)0.005 (2)0.0063 (18)−0.004 (2)
C14A0.024 (2)0.031 (2)0.035 (2)0.0021 (17)−0.0004 (17)−0.0004 (19)
C15A0.024 (2)0.032 (2)0.031 (2)0.0006 (17)0.0008 (16)−0.0007 (18)
S1B0.0199 (5)0.0449 (7)0.0374 (6)0.0012 (5)−0.0017 (4)0.0018 (5)
O7B0.0216 (15)0.080 (3)0.0314 (17)−0.0009 (17)−0.0012 (13)0.0034 (18)
O8B0.0331 (18)0.080 (3)0.0366 (19)−0.0020 (18)0.0085 (15)−0.0028 (19)
O9B0.048 (2)0.069 (3)0.0303 (18)0.000 (2)0.0063 (15)−0.0004 (18)
O10B0.0261 (17)0.053 (2)0.060 (2)0.0086 (16)−0.0035 (16)−0.0015 (19)
O11B0.041 (2)0.052 (2)0.070 (3)−0.0094 (18)0.0085 (19)0.003 (2)
O12B0.0287 (17)0.088 (3)0.0354 (19)0.0048 (19)−0.0048 (14)−0.003 (2)
C9B0.029 (2)0.036 (2)0.030 (2)0.0049 (19)0.0029 (18)0.0043 (19)
C10B0.025 (2)0.029 (2)0.030 (2)0.0021 (17)−0.0024 (16)0.0034 (18)
C11B0.038 (2)0.035 (2)0.027 (2)0.000 (2)0.0025 (18)0.0020 (19)
C12B0.039 (3)0.050 (3)0.032 (2)−0.002 (2)−0.007 (2)−0.006 (2)
C13B0.027 (2)0.041 (3)0.041 (3)−0.003 (2)−0.0124 (19)−0.002 (2)
C14B0.025 (2)0.031 (2)0.030 (2)−0.0007 (17)−0.0004 (16)0.0033 (19)
C15B0.0243 (19)0.029 (2)0.027 (2)0.0013 (17)−0.0014 (16)−0.0012 (18)
O1W0.0373 (19)0.064 (2)0.0336 (18)−0.0042 (19)0.0112 (16)0.0006 (17)
O2W0.0378 (19)0.057 (2)0.0288 (17)0.0041 (17)0.0081 (14)0.0002 (17)
O4W0.165 (6)0.065 (3)0.067 (3)0.006 (4)−0.048 (4)−0.014 (3)
O6A—C6A1.228 (5)S1A—O12A1.453 (3)
N1A—C2A1.346 (6)S1A—O10A1.466 (3)
N1A—C6A1.395 (5)S1A—C14A1.772 (4)
N1A—H1A0.8600O7A—C9A1.318 (6)
N3A—C2A1.293 (6)O7A—H7D0.8200
N3A—C4A1.362 (5)O8A—C9A1.216 (5)
N7A—C8A1.330 (6)O9A—C11A1.350 (5)
N7A—C5A1.384 (5)O9A—H9D0.8200
N7A—H7A0.8600C9A—C10A1.479 (6)
N9A—C8A1.334 (6)C10A—C15A1.389 (6)
N9A—C4A1.370 (5)C10A—C11A1.402 (6)
N9A—H9A0.8600C11A—C12A1.395 (6)
C2A—H2A0.9300C12A—C13A1.378 (7)
C4A—C5A1.354 (6)C12A—H12A0.9300
C5A—C6A1.415 (6)C13A—C14A1.394 (6)
C8A—H8A0.9300C13A—H13A0.9300
N1B—C2B1.300 (9)C14A—C15A1.382 (6)
N1B—C6B1.452 (12)C15A—H15A0.9300
N1B—C5B1.452 (15)S1B—O11B1.447 (4)
N1B—H1C0.8600S1B—O12B1.456 (4)
N1B—H1B0.8600S1B—O10B1.460 (4)
C2B—N3B1.301 (7)S1B—C14B1.767 (4)
C2B—C5B2.013 (16)O7B—C9B1.310 (5)
C2B—H2B0.9300O7B—H7E0.8200
N3B—C4B1.361 (6)O8B—C9B1.227 (5)
C4B—N9B1.339 (6)O9B—C11B1.342 (6)
C4B—C5B1.378 (12)O9B—H9E0.8200
C4B—C5C1.396 (12)C9B—C10B1.466 (6)
O6B—C6B1.222 (15)C10B—C15B1.401 (6)
C5C—N7B1.425 (13)C10B—C11B1.405 (6)
C5C—C6B1.458 (18)C11B—C12B1.399 (7)
C5C—C8B2.009 (15)C12B—C13B1.366 (7)
O6C—C6C1.227 (16)C12B—H12B0.9300
C5B—C6C1.41 (2)C13B—C14B1.401 (6)
C6C—N7B1.476 (14)C13B—H13B0.9300
N7B—C8B1.319 (9)C14B—C15B1.383 (6)
N7B—H7B0.8600C15B—H15B0.9300
N7B—H7C0.8600O1W—H1WA0.8501
C8B—N9B1.301 (7)O1W—H1WB0.8493
C8B—H8B0.9300O2W—H2WA0.821 (10)
N9B—H9B0.8600O2W—H2WB0.820 (10)
S1A—O11A1.439 (4)
C2A—N1A—C6A125.2 (4)N9B—C8B—C5C74.8 (5)
C2A—N1A—H1A117.4N7B—C8B—C5C45.0 (4)
C6A—N1A—H1A117.4N9B—C8B—H8B120.1
C2A—N3A—C4A112.2 (4)N7B—C8B—H8B120.1
C8A—N7A—C5A107.1 (4)C5C—C8B—H8B165.1
C8A—N7A—H7A126.4C8B—N9B—C4B109.5 (5)
C5A—N7A—H7A126.4C8B—N9B—H9B125.2
C8A—N9A—C4A107.7 (4)C4B—N9B—H9B125.2
C8A—N9A—H9A126.1O11A—S1A—O12A112.6 (2)
C4A—N9A—H9A126.1O11A—S1A—O10A113.0 (2)
N3A—C2A—N1A125.4 (4)O12A—S1A—O10A111.8 (2)
N3A—C2A—H2A117.3O11A—S1A—C14A106.4 (2)
N1A—C2A—H2A117.3O12A—S1A—C14A106.0 (2)
C5A—C4A—N3A126.3 (4)O10A—S1A—C14A106.4 (2)
C5A—C4A—N9A107.5 (4)C9A—O7A—H7D109.5
N3A—C4A—N9A126.2 (4)C11A—O9A—H9D109.5
C4A—C5A—N7A107.5 (4)O8A—C9A—O7A122.1 (4)
C4A—C5A—C6A121.5 (4)O8A—C9A—C10A123.6 (4)
N7A—C5A—C6A131.0 (4)O7A—C9A—C10A114.2 (4)
O6A—C6A—N1A121.4 (4)C15A—C10A—C11A119.5 (4)
O6A—C6A—C5A129.1 (4)C15A—C10A—C9A121.1 (4)
N1A—C6A—C5A109.5 (4)C11A—C10A—C9A119.4 (4)
N7A—C8A—N9A110.1 (4)O9A—C11A—C12A116.8 (4)
N7A—C8A—H8A125.0O9A—C11A—C10A123.8 (4)
N9A—C8A—H8A125.0C12A—C11A—C10A119.4 (4)
C2B—N1B—C6B137.0 (7)C13A—C12A—C11A120.5 (4)
C2B—N1B—C5B93.9 (7)C13A—C12A—H12A119.8
C2B—N1B—H1C111.5C11A—C12A—H12A119.8
C6B—N1B—H1C111.5C12A—C13A—C14A120.2 (4)
C2B—N1B—H1B133.1C12A—C13A—H13A119.9
C5B—N1B—H1B133.1C14A—C13A—H13A119.9
N1B—C2B—N3B121.5 (6)C15A—C14A—C13A119.7 (4)
N1B—C2B—C5B46.0 (5)C15A—C14A—S1A121.3 (3)
N3B—C2B—C5B75.5 (5)C13A—C14A—S1A119.0 (3)
N1B—C2B—H2B119.3C14A—C15A—C10A120.7 (4)
N3B—C2B—H2B119.3C14A—C15A—H15A119.6
C5B—C2B—H2B165.3C10A—C15A—H15A119.6
C2B—N3B—C4B107.9 (5)O11B—S1B—O12B112.8 (3)
N9B—C4B—N3B126.2 (5)O11B—S1B—O10B112.5 (2)
N9B—C4B—C5B133.4 (8)O12B—S1B—O10B111.5 (2)
N3B—C4B—C5B100.4 (7)O11B—S1B—C14B106.2 (2)
N9B—C4B—C5C99.5 (7)O12B—S1B—C14B107.3 (2)
N3B—C4B—C5C134.3 (7)O10B—S1B—C14B106.1 (2)
C4B—C5C—N7B117.1 (10)C9B—O7B—H7E109.5
C4B—C5C—C6B117.7 (10)C11B—O9B—H9E109.5
N7B—C5C—C6B125.2 (10)O8B—C9B—O7B122.7 (4)
C4B—C5C—C8B76.2 (6)O8B—C9B—C10B122.9 (4)
N7B—C5C—C8B40.9 (5)O7B—C9B—C10B114.4 (4)
C6B—C5C—C8B166.0 (9)C15B—C10B—C11B119.4 (4)
O6B—C6B—N1B136.7 (11)C15B—C10B—C9B121.3 (4)
O6B—C6B—C5C121.8 (11)C11B—C10B—C9B119.3 (4)
N1B—C6B—C5C101.5 (8)O9B—C11B—C12B117.6 (4)
C4B—C5B—C6C120.4 (12)O9B—C11B—C10B122.8 (4)
C4B—C5B—N1B116.4 (10)C12B—C11B—C10B119.6 (4)
C6C—C5B—N1B123.2 (10)C13B—C12B—C11B120.5 (4)
C4B—C5B—C2B76.3 (7)C13B—C12B—H12B119.8
C6C—C5B—C2B163.3 (10)C11B—C12B—H12B119.8
N1B—C5B—C2B40.1 (5)C12B—C13B—C14B120.5 (4)
O6C—C6C—C5B126.6 (13)C12B—C13B—H13B119.8
O6C—C6C—N7B132.2 (13)C14B—C13B—H13B119.8
C5B—C6C—N7B101.2 (8)C15B—C14B—C13B119.8 (4)
C8B—N7B—C5C94.1 (7)C15B—C14B—S1B120.8 (3)
C8B—N7B—C6C135.6 (7)C13B—C14B—S1B119.4 (3)
C8B—N7B—H7B133.0C14B—C15B—C10B120.2 (4)
C5C—N7B—H7B133.0C14B—C15B—H15B119.9
C8B—N7B—H7C112.2C10B—C15B—H15B119.9
C6C—N7B—H7C112.2H1WA—O1W—H1WB104.5
N9B—C8B—N7B119.8 (6)H2WA—O2W—H2WB112 (10)
C4A—N3A—C2A—N1A0.3 (7)C6B—C5C—N7B—C8B178.1 (9)
C6A—N1A—C2A—N3A−0.5 (8)O6C—C6C—N7B—C8B178.6 (13)
C2A—N3A—C4A—C5A0.0 (7)C5B—C6C—N7B—C8B−2.0 (12)
C2A—N3A—C4A—N9A−179.1 (4)C5C—N7B—C8B—N9B0.3 (8)
C8A—N9A—C4A—C5A−0.4 (5)C6C—N7B—C8B—N9B2.6 (12)
C8A—N9A—C4A—N3A179.0 (4)N7B—C8B—N9B—C4B−0.6 (8)
N3A—C4A—C5A—N7A−179.2 (4)C5C—C8B—N9B—C4B−0.4 (5)
N9A—C4A—C5A—N7A0.1 (5)N3B—C4B—N9B—C8B178.7 (5)
N3A—C4A—C5A—C6A−0.1 (7)C5B—C4B—N9B—C8B−1.3 (10)
N9A—C4A—C5A—C6A179.2 (4)C5C—C4B—N9B—C8B0.5 (7)
C8A—N7A—C5A—C4A0.2 (5)O8A—C9A—C10A—C15A179.1 (5)
C8A—N7A—C5A—C6A−178.8 (5)O7A—C9A—C10A—C15A1.1 (6)
C2A—N1A—C6A—O6A−179.1 (5)O8A—C9A—C10A—C11A−0.3 (7)
C2A—N1A—C6A—C5A0.4 (6)O7A—C9A—C10A—C11A−178.2 (4)
C4A—C5A—C6A—O6A179.4 (5)C15A—C10A—C11A—O9A−180.0 (4)
N7A—C5A—C6A—O6A−1.7 (9)C9A—C10A—C11A—O9A−0.6 (7)
C4A—C5A—C6A—N1A−0.1 (6)C15A—C10A—C11A—C12A−1.3 (7)
N7A—C5A—C6A—N1A178.7 (4)C9A—C10A—C11A—C12A178.1 (4)
C5A—N7A—C8A—N9A−0.4 (6)O9A—C11A—C12A—C13A179.2 (5)
C4A—N9A—C8A—N7A0.5 (6)C10A—C11A—C12A—C13A0.4 (7)
C6B—N1B—C2B—N3B0.6 (12)C11A—C12A—C13A—C14A0.6 (8)
C5B—N1B—C2B—N3B−0.6 (8)C12A—C13A—C14A—C15A−0.8 (7)
N1B—C2B—N3B—C4B0.6 (8)C12A—C13A—C14A—S1A178.7 (4)
C5B—C2B—N3B—C4B0.2 (5)O11A—S1A—C14A—C15A116.8 (4)
C2B—N3B—C4B—N9B179.7 (5)O12A—S1A—C14A—C15A−3.4 (5)
C2B—N3B—C4B—C5B−0.2 (7)O10A—S1A—C14A—C15A−122.5 (4)
C2B—N3B—C4B—C5C−2.7 (10)O11A—S1A—C14A—C13A−62.7 (4)
N9B—C4B—C5C—N7B−0.4 (9)O12A—S1A—C14A—C13A177.2 (4)
N3B—C4B—C5C—N7B−178.3 (6)O10A—S1A—C14A—C13A58.0 (4)
N9B—C4B—C5C—C6B−178.6 (8)C13A—C14A—C15A—C10A−0.1 (7)
N3B—C4B—C5C—C6B3.4 (13)S1A—C14A—C15A—C10A−179.6 (3)
N9B—C4B—C5C—C8B−0.3 (4)C11A—C10A—C15A—C14A1.1 (7)
N3B—C4B—C5C—C8B−178.3 (6)C9A—C10A—C15A—C14A−178.2 (4)
C2B—N1B—C6B—O6B−177.8 (13)O8B—C9B—C10B—C15B179.5 (5)
C2B—N1B—C6B—C5C−0.1 (12)O7B—C9B—C10B—C15B−1.8 (6)
C4B—C5C—C6B—O6B176.7 (11)O8B—C9B—C10B—C11B−2.8 (7)
N7B—C5C—C6B—O6B−1.4 (17)O7B—C9B—C10B—C11B175.9 (4)
C8B—C5C—C6B—O6B4 (4)C15B—C10B—C11B—O9B179.4 (4)
C4B—C5C—C6B—N1B−1.5 (11)C9B—C10B—C11B—O9B1.6 (7)
N7B—C5C—C6B—N1B−179.6 (8)C15B—C10B—C11B—C12B0.0 (7)
C8B—C5C—C6B—N1B−174 (3)C9B—C10B—C11B—C12B−177.8 (5)
N9B—C4B—C5B—C6C1.7 (14)O9B—C11B—C12B—C13B−178.9 (5)
N3B—C4B—C5B—C6C−178.4 (9)C10B—C11B—C12B—C13B0.5 (8)
N9B—C4B—C5B—N1B179.9 (6)C11B—C12B—C13B—C14B−1.1 (8)
N3B—C4B—C5B—N1B−0.1 (9)C12B—C13B—C14B—C15B1.2 (7)
N9B—C4B—C5B—C2B−179.8 (6)C12B—C13B—C14B—S1B−177.9 (4)
N3B—C4B—C5B—C2B0.1 (4)O11B—S1B—C14B—C15B−114.7 (4)
C2B—N1B—C5B—C4B0.4 (9)O12B—S1B—C14B—C15B6.0 (5)
C2B—N1B—C5B—C6C178.6 (9)O10B—S1B—C14B—C15B125.3 (4)
C4B—C5B—C6C—O6C179.4 (12)O11B—S1B—C14B—C13B64.3 (4)
N1B—C5B—C6C—O6C1.2 (19)O12B—S1B—C14B—C13B−174.9 (4)
C2B—C5B—C6C—O6C4 (4)O10B—S1B—C14B—C13B−55.6 (4)
C4B—C5B—C6C—N7B0.0 (12)C13B—C14B—C15B—C10B−0.6 (7)
N1B—C5B—C6C—N7B−178.2 (8)S1B—C14B—C15B—C10B178.4 (3)
C2B—C5B—C6C—N7B−175 (3)C11B—C10B—C15B—C14B0.0 (7)
C4B—C5C—N7B—C8B0.1 (9)C9B—C10B—C15B—C14B177.8 (4)
D—H···AD—HH···AD···AD—H···A
N7B—H7B···O3WAi0.862.263.08158
O7A—H7D···O10Aii0.821.862.677170
O7B—H7E···O10Bi0.821.842.655175
O9A—H9D···O12Bii0.822.342.924128
O9B—H9E···O12Aiii0.822.543.143131
O1W—H1WA···O6Aiv0.852.312.801117
O1W—H1WA···O10Biv0.852.282.917132
N9B—H9B···O6Bv0.862.423.044130
N9B—H9B···O3WAvi0.862.473.07128
N1A—H1A···O6Avii0.862.052.898170
N1B—H1C···O4W0.862.222.890135
N1B—H1C···O11A0.862.452.998122
O1W—H1WB···O12B0.852.012.844169
O2W—H2WA···N3A0.832.072.849157
O2W—H2WB···O12A0.822.032.815160
N7A—H7A···O1W0.861.772.615168
N9A—H9A···O2W0.861.892.697157
C2A—H2A···O1Wii0.932.433.149134
C2B—H2B···O11A0.932.462.974114
C8A—H8A···O2Wviii0.932.403.310167
C15B—H15B···O9A0.932.593.510172
C5H5N4O+·ClO4·H2OF(000) = 520
Mr = 254.60Dx = 1.833 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 5.0307 (6) ÅCell parameters from 2752 reflections
b = 20.386 (2) Åθ = 2.0–30.3°
c = 9.0181 (10) ŵ = 0.44 mm1
β = 94.233 (2)°T = 296 K
V = 922.33 (18) Å3Plate, colourless
Z = 40.45 × 0.02 × 0.003 mm
Bruker APEXII CCD diffractometer2370 reflections with I > 2σ(I)
φ and ω scansRint = 0.025
Absorption correction: multi-scan (SADABS; Bruker, 2016)θmax = 30.3°, θmin = 2.0°
Tmin = 0.957, Tmax = 1.000h = −7→7
16360 measured reflectionsk = −28→28
2752 independent reflectionsl = −12→12
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.038H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.111w = 1/[σ2(Fo2) + (0.0576P)2 + 0.3728P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2752 reflectionsΔρmax = 0.37 e Å3
165 parametersΔρmin = −0.29 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Cl11.32826 (7)0.47612 (2)0.23036 (5)0.03437 (13)
O61.1975 (2)0.28099 (6)0.28926 (13)0.0395 (3)
O21.2250 (4)0.53538 (8)0.1690 (2)0.0699 (5)
O31.6141 (3)0.47706 (8)0.2342 (2)0.0627 (4)
O41.2288 (3)0.42071 (7)0.14577 (18)0.0571 (4)
O51.2456 (3)0.46991 (8)0.37946 (17)0.0598 (4)
N10.9409 (3)0.35230 (6)0.41720 (15)0.0334 (3)
H11.018 (4)0.3843 (12)0.387 (3)0.049 (6)*
N70.8829 (2)0.17434 (6)0.43852 (14)0.0281 (3)
H70.992 (5)0.1492 (12)0.387 (3)0.060 (7)*
N90.5789 (2)0.20049 (6)0.58838 (14)0.0284 (3)
H90.462 (5)0.1993 (11)0.650 (3)0.046 (6)*
C20.7509 (3)0.36488 (7)0.51258 (18)0.0342 (3)
H20.7162290.4085910.5334220.041*
N30.6127 (3)0.32029 (6)0.57756 (14)0.0312 (3)
C40.6819 (3)0.25866 (7)0.53983 (15)0.0246 (3)
C50.8730 (3)0.24168 (7)0.44524 (15)0.0243 (3)
C61.0223 (3)0.29051 (7)0.37512 (16)0.0272 (3)
C80.7053 (3)0.15077 (7)0.52526 (17)0.0311 (3)
H80.6726040.1064620.5404200.037*
O1W0.2214 (3)0.38054 (6)0.76425 (18)0.0511 (4)
H1W0.252 (5)0.4216 (5)0.765 (3)0.066 (7)*
H2W0.344 (4)0.3627 (10)0.718 (3)0.081 (9)*
U11U22U33U12U13U23
Cl10.0347 (2)0.02074 (17)0.0495 (2)−0.00172 (12)0.01561 (16)−0.00075 (13)
O60.0398 (6)0.0391 (6)0.0428 (6)−0.0012 (5)0.0248 (5)0.0054 (5)
O20.0807 (12)0.0369 (7)0.0952 (13)0.0172 (7)0.0277 (10)0.0222 (8)
O30.0351 (7)0.0545 (9)0.1004 (13)−0.0050 (6)0.0182 (7)−0.0109 (8)
O40.0551 (8)0.0419 (8)0.0757 (10)−0.0102 (6)0.0147 (7)−0.0226 (7)
O50.0734 (10)0.0587 (9)0.0503 (8)−0.0211 (8)0.0244 (7)−0.0040 (6)
N10.0377 (7)0.0255 (6)0.0388 (7)−0.0043 (5)0.0146 (5)0.0030 (5)
N70.0305 (6)0.0236 (5)0.0317 (6)0.0031 (4)0.0130 (5)0.0006 (4)
N90.0282 (6)0.0285 (6)0.0304 (6)−0.0020 (4)0.0141 (5)0.0016 (4)
C20.0410 (8)0.0242 (6)0.0385 (8)0.0007 (6)0.0120 (6)−0.0031 (6)
N30.0331 (6)0.0269 (6)0.0351 (6)0.0024 (5)0.0132 (5)−0.0026 (5)
C40.0233 (6)0.0261 (6)0.0254 (6)−0.0003 (5)0.0075 (5)0.0005 (5)
C50.0246 (6)0.0241 (6)0.0251 (6)0.0007 (5)0.0085 (5)0.0023 (5)
C60.0269 (6)0.0279 (6)0.0277 (6)−0.0020 (5)0.0083 (5)0.0032 (5)
C80.0338 (7)0.0245 (6)0.0367 (7)−0.0007 (5)0.0128 (6)0.0022 (5)
O1W0.0546 (8)0.0302 (6)0.0739 (9)−0.0081 (6)0.0417 (7)−0.0050 (6)
Cl1—O21.4116 (15)N9—C81.3452 (19)
Cl1—O41.4324 (13)N9—C41.3784 (17)
Cl1—O31.4359 (15)N9—H90.84 (2)
Cl1—O51.4421 (15)C2—N31.309 (2)
O6—C61.2307 (17)C2—H20.9300
N1—C21.357 (2)N3—C41.3539 (18)
N1—C61.3860 (19)C4—C51.3758 (17)
N1—H10.82 (2)C5—C61.4229 (18)
N7—C81.3204 (18)C8—H80.9300
N7—C51.3752 (18)O1W—H1W0.852 (9)
N7—H70.90 (3)O1W—H2W0.850 (9)
O2—Cl1—O4111.24 (12)N3—C2—H2117.4
O2—Cl1—O3109.68 (11)N1—C2—H2117.4
O4—Cl1—O3109.46 (9)C2—N3—C4112.14 (12)
O2—Cl1—O5108.50 (11)N3—C4—C5126.43 (12)
O4—Cl1—O5108.29 (9)N3—C4—N9127.50 (12)
O3—Cl1—O5109.63 (11)C5—C4—N9106.07 (12)
C2—N1—C6125.56 (13)N7—C5—C4107.91 (11)
C2—N1—H1115.8 (16)N7—C5—C6131.06 (12)
C6—N1—H1118.5 (16)C4—C5—C6121.02 (13)
C8—N7—C5108.00 (12)O6—C6—N1123.73 (13)
C8—N7—H7124.0 (16)O6—C6—C5126.53 (14)
C5—N7—H7128.0 (16)N1—C6—C5109.75 (12)
C8—N9—C4108.26 (11)N7—C8—N9109.76 (12)
C8—N9—H9129.5 (15)N7—C8—H8125.1
C4—N9—H9122.2 (15)N9—C8—H8125.1
N3—C2—N1125.11 (14)H1W—O1W—H2W106.9 (14)
C6—N1—C2—N3−1.1 (3)N3—C4—C5—C60.0 (2)
N1—C2—N3—C40.5 (2)N9—C4—C5—C6−179.54 (13)
C2—N3—C4—C50.0 (2)C2—N1—C6—O6−179.27 (16)
C2—N3—C4—N9179.42 (15)C2—N1—C6—C51.0 (2)
C8—N9—C4—N3−179.25 (14)N7—C5—C6—O60.6 (3)
C8—N9—C4—C50.24 (16)C4—C5—C6—O6179.83 (15)
C8—N7—C5—C40.01 (17)N7—C5—C6—N1−179.65 (14)
C8—N7—C5—C6179.31 (15)C4—C5—C6—N1−0.4 (2)
N3—C4—C5—N7179.34 (14)C5—N7—C8—N90.15 (18)
N9—C4—C5—N7−0.15 (15)C4—N9—C8—N7−0.24 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1···O40.822.603.249138
N1—H1···O50.822.092.879162
N7—H7···O2i0.912.603.031110.2
N7—H7···O1Wii0.911.762.6489165
N9—H9···O6iii0.841.932.7602166
O1W—H1W···O3iv0.852.173.018172
O1W—H2W···N30.852.112.951172
C8—H8···O2i0.932.472.970114
C8—H8···O3iii0.932.473.268144
C8—H8···O4iii0.932.553.072116
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