| Literature DB >> 36072143 |
Firudin I Guseinov1,2, Konstantin I Kobrakov1, Elena V Shuvalova1,2, Egor I Tuzharov2, Mehmet Akkurt3, Sema Öztürk Yıldırım4,5, Ajaya Bhattarai6.
Abstract
In the title compound, C18H16ClNO2S, the thia-zole ring subtends dihedral angles of 13.12 (14) and 43.79 (14) ° with the attached chloro-phenyl and phenyl rings, respectively. In the crystal, C-H⋯π inter-actions link the mol-ecules, forming a three-dimensional network. The roles of the various inter-molecular inter-actions were clarified by Hirshfeld surface analysis, which reveals that the most important contributions to the crystal packing are from H⋯H (39.2%), H⋯C/C⋯H (25.2%), Cl⋯H/H⋯Cl (11.4%) and O⋯H/H⋯O (8.0%) contacts. © Guseinov et al. 2022.Entities:
Keywords: C—H⋯π interactions; Hirshfeld surface analysis; chlorophenyl ring; crystal structure; thiazole ring
Year: 2022 PMID: 36072143 PMCID: PMC9431783 DOI: 10.1107/S2056989022005564
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The title molecule with displacement ellipsoids drawn at the 50% probability level.
Hydrogen-bond geometry (Å, °)
Cg1 and Cg3 are the centroids of the C1–C3/S1/N1 and C13–C18 rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C5—H5⋯S1 | 0.95 | 2.74 | 3.143 (3) | 106 |
| C6—H6⋯ | 0.95 | 2.81 | 3.620 (3) | 144 |
| C12—H12 | 0.98 | 2.81 | 3.406 (3) | 120 |
| C15—H15⋯ | 0.95 | 2.95 | 3.481 (3) | 117 |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 2The packing viewed along the a-axis direction with the C—H⋯π interactions indicated by dashed lines.
Figure 3The three-dimensional Hirshfeld surface for the title compound, plotted over d norm in the range −0.08 to +1.30 a.u.
Figure 4A view of the two-dimensional fingerprint plots for the title compound, showing (a) all interactions, and delineated into (b) H⋯H, (c) C⋯H/H⋯C, (d) Cl⋯H/H⋯Cl and (e) O⋯H/H⋯O interactions. The d i and d e values are the closest internal and external distances (in Å) from given points on the Hirshfeld surface.
Percentage contributions of interatomic contacts to the Hirshfeld surface for the title compound
| Contact | Percentage contribution |
|---|---|
| H⋯H | 39.2 |
| H⋯C/C⋯H | 25.2 |
| Cl⋯H/H⋯Cl | 11.4 |
| O⋯H/H⋯O | 8.0 |
| S⋯H/H⋯S | 5.1 |
| N⋯H/H⋯N | 3.9 |
| C⋯C | 2.4 |
| Cl⋯C/C⋯Cl | 1.7 |
| S⋯C/C⋯S | 1.5 |
| Cl⋯Cl | 0.6 |
| S⋯S | 0.2 |
| O⋯C/C⋯O | 0.1 |
Experimental details
| Crystal data | |
| Chemical formula | C18H16ClNO2S |
|
| 345.83 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 100 |
|
| 6.6235 (1), 25.1848 (3), 9.8283 (1) |
| β (°) | 96.504 (1) |
|
| 1628.92 (4) |
|
| 4 |
| Radiation type | Cu |
| μ (mm−1) | 3.34 |
| Crystal size (mm) | 0.2 × 0.12 × 0.04 |
| Data collection | |
| Diffractometer | XtaLAB Synergy, Dualflex, HyPix |
| Absorption correction | Multi-scan ( |
|
| 0.638, 1.000 |
| No. of measured, independent and observed [ | 31880, 3497, 3304 |
|
| 0.064 |
| (sin θ/λ)max (Å−1) | 0.638 |
| Refinement | |
|
| 0.055, 0.153, 1.12 |
| No. of reflections | 3497 |
| No. of parameters | 210 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.67, −0.52 |
Computer programs: CrysAlis PRO (Rigaku OD, 2022 ▸), SHELXT2016/6 (Sheldrick, 2015a ▸), SHELXL2016/6 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2020 ▸).
| C18H16ClNO2S | |
| Monoclinic, | Cu |
| Cell parameters from 20657 reflections | |
| θ = 3.5–79.0° | |
| µ = 3.34 mm−1 | |
| β = 96.504 (1)° | |
| Block, colourless | |
| 0.2 × 0.12 × 0.04 mm |
| XtaLAB Synergy, Dualflex, HyPix diffractometer | 3497 independent reflections |
| Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source | 3304 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.0000 pixels mm-1 | θmax = 79.5°, θmin = 3.5° |
| ω scans | |
| Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2022) | |
| 31880 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3497 reflections | (Δ/σ)max = 0.001 |
| 210 parameters | Δρmax = 0.67 e Å−3 |
| 0 restraints | Δρmin = −0.52 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cl1 | 1.46338 (11) | 0.46239 (3) | 0.83382 (7) | 0.0279 (2) | |
| S1 | 0.51773 (10) | 0.42961 (2) | 0.43335 (7) | 0.01922 (18) | |
| O1 | 0.4944 (3) | 0.23523 (8) | 0.4398 (2) | 0.0232 (4) | |
| O2 | 0.2192 (3) | 0.27028 (8) | 0.5252 (2) | 0.0234 (4) | |
| N1 | 0.6210 (4) | 0.33759 (9) | 0.5297 (2) | 0.0195 (5) | |
| C1 | 0.6779 (4) | 0.38728 (11) | 0.5353 (3) | 0.0197 (5) | |
| C2 | 0.4449 (4) | 0.33113 (11) | 0.4441 (3) | 0.0194 (5) | |
| C3 | 0.3640 (4) | 0.37626 (10) | 0.3799 (3) | 0.0184 (5) | |
| C4 | 0.8675 (4) | 0.40656 (11) | 0.6128 (3) | 0.0195 (5) | |
| C5 | 0.9086 (4) | 0.46059 (11) | 0.6290 (3) | 0.0204 (5) | |
| H5 | 0.809694 | 0.485762 | 0.593256 | 0.025* | |
| C6 | 1.0909 (4) | 0.47816 (11) | 0.6960 (3) | 0.0210 (5) | |
| H6 | 1.118224 | 0.515046 | 0.706735 | 0.025* | |
| C7 | 1.2333 (4) | 0.44064 (12) | 0.7474 (3) | 0.0213 (6) | |
| C8 | 1.1971 (4) | 0.38669 (12) | 0.7341 (3) | 0.0229 (6) | |
| H8 | 1.296580 | 0.361728 | 0.770269 | 0.028* | |
| C9 | 1.0129 (4) | 0.36970 (11) | 0.6669 (3) | 0.0217 (6) | |
| H9 | 0.985437 | 0.332781 | 0.657512 | 0.026* | |
| C10 | 0.3501 (4) | 0.27646 (11) | 0.4245 (3) | 0.0194 (5) | |
| H10 | 0.270809 | 0.274179 | 0.331869 | 0.023* | |
| C11 | 0.5988 (5) | 0.22879 (13) | 0.3220 (3) | 0.0296 (7) | |
| H11A | 0.501099 | 0.230402 | 0.239378 | 0.044* | |
| H11B | 0.667819 | 0.194318 | 0.326277 | 0.044* | |
| H11C | 0.699242 | 0.257220 | 0.319221 | 0.044* | |
| C12 | 0.0998 (5) | 0.22282 (13) | 0.5072 (3) | 0.0315 (7) | |
| H12A | 0.051128 | 0.218272 | 0.410015 | 0.047* | |
| H12B | −0.016708 | 0.225524 | 0.560094 | 0.047* | |
| H12C | 0.183243 | 0.192197 | 0.539363 | 0.047* | |
| C13 | 0.1824 (4) | 0.38355 (11) | 0.2793 (3) | 0.0188 (5) | |
| C14 | −0.0001 (4) | 0.35859 (11) | 0.2967 (3) | 0.0201 (5) | |
| H14 | −0.009865 | 0.337216 | 0.375383 | 0.024* | |
| C15 | −0.1681 (5) | 0.36470 (12) | 0.2001 (3) | 0.0239 (6) | |
| H15 | −0.291864 | 0.347268 | 0.212459 | 0.029* | |
| C16 | −0.1560 (5) | 0.39635 (12) | 0.0848 (3) | 0.0248 (6) | |
| H16 | −0.270937 | 0.400469 | 0.018481 | 0.030* | |
| C17 | 0.0259 (5) | 0.42183 (12) | 0.0677 (3) | 0.0245 (6) | |
| H17 | 0.034629 | 0.443579 | −0.010394 | 0.029* | |
| C18 | 0.1943 (4) | 0.41573 (11) | 0.1636 (3) | 0.0213 (6) | |
| H18 | 0.317831 | 0.433298 | 0.151148 | 0.026* |
| Cl1 | 0.0244 (4) | 0.0301 (4) | 0.0270 (4) | −0.0046 (3) | −0.0063 (3) | 0.0036 (3) |
| S1 | 0.0205 (3) | 0.0162 (3) | 0.0206 (3) | 0.0005 (2) | 0.0007 (2) | 0.0009 (2) |
| O1 | 0.0250 (10) | 0.0203 (10) | 0.0236 (10) | 0.0031 (8) | −0.0004 (8) | −0.0006 (7) |
| O2 | 0.0281 (11) | 0.0210 (10) | 0.0217 (10) | −0.0055 (8) | 0.0051 (8) | 0.0013 (8) |
| N1 | 0.0219 (12) | 0.0199 (11) | 0.0168 (10) | 0.0006 (9) | 0.0024 (9) | 0.0009 (8) |
| C1 | 0.0238 (14) | 0.0192 (13) | 0.0169 (12) | 0.0028 (10) | 0.0056 (10) | 0.0010 (10) |
| C2 | 0.0216 (14) | 0.0203 (13) | 0.0167 (12) | 0.0004 (10) | 0.0044 (10) | −0.0005 (10) |
| C3 | 0.0195 (13) | 0.0181 (12) | 0.0180 (12) | −0.0005 (10) | 0.0030 (10) | −0.0006 (9) |
| C4 | 0.0210 (13) | 0.0216 (13) | 0.0165 (12) | 0.0016 (10) | 0.0044 (10) | −0.0005 (10) |
| C5 | 0.0183 (13) | 0.0228 (13) | 0.0204 (13) | 0.0037 (10) | 0.0029 (10) | 0.0014 (10) |
| C6 | 0.0230 (14) | 0.0200 (13) | 0.0205 (13) | −0.0015 (10) | 0.0047 (11) | −0.0005 (10) |
| C7 | 0.0204 (13) | 0.0278 (14) | 0.0161 (12) | −0.0009 (11) | 0.0031 (10) | 0.0002 (10) |
| C8 | 0.0239 (14) | 0.0242 (14) | 0.0204 (13) | 0.0045 (11) | 0.0009 (11) | 0.0013 (10) |
| C9 | 0.0254 (14) | 0.0191 (13) | 0.0209 (13) | 0.0009 (10) | 0.0032 (11) | 0.0002 (10) |
| C10 | 0.0193 (13) | 0.0204 (13) | 0.0180 (12) | 0.0001 (10) | 0.0000 (10) | 0.0012 (10) |
| C11 | 0.0258 (15) | 0.0309 (16) | 0.0323 (16) | 0.0035 (12) | 0.0051 (12) | −0.0037 (12) |
| C12 | 0.0367 (18) | 0.0257 (15) | 0.0318 (16) | −0.0109 (13) | 0.0028 (13) | 0.0037 (12) |
| C13 | 0.0220 (14) | 0.0183 (12) | 0.0160 (12) | 0.0025 (10) | 0.0014 (10) | −0.0011 (9) |
| C14 | 0.0205 (13) | 0.0211 (13) | 0.0191 (12) | 0.0024 (10) | 0.0044 (10) | 0.0007 (10) |
| C15 | 0.0231 (14) | 0.0247 (14) | 0.0241 (14) | 0.0024 (11) | 0.0035 (11) | −0.0017 (11) |
| C16 | 0.0243 (14) | 0.0275 (14) | 0.0212 (13) | 0.0075 (11) | −0.0031 (11) | −0.0015 (11) |
| C17 | 0.0319 (16) | 0.0240 (14) | 0.0176 (13) | 0.0051 (12) | 0.0024 (11) | 0.0022 (10) |
| C18 | 0.0238 (14) | 0.0186 (12) | 0.0224 (13) | 0.0004 (10) | 0.0057 (11) | 0.0008 (10) |
| Cl1—C7 | 1.747 (3) | C8—C9 | 1.387 (4) |
| S1—C1 | 1.740 (3) | C9—H9 | 0.9500 |
| S1—C3 | 1.731 (3) | C10—H10 | 1.0000 |
| O1—C10 | 1.408 (3) | C11—H11A | 0.9800 |
| O1—C11 | 1.424 (4) | C11—H11B | 0.9800 |
| O2—C10 | 1.396 (3) | C11—H11C | 0.9800 |
| O2—C12 | 1.433 (4) | C12—H12A | 0.9800 |
| N1—C1 | 1.306 (4) | C12—H12B | 0.9800 |
| N1—C2 | 1.368 (4) | C12—H12C | 0.9800 |
| C1—C4 | 1.475 (4) | C13—C14 | 1.391 (4) |
| C2—C3 | 1.379 (4) | C13—C18 | 1.406 (4) |
| C2—C10 | 1.517 (4) | C14—H14 | 0.9500 |
| C3—C13 | 1.480 (4) | C14—C15 | 1.387 (4) |
| C4—C5 | 1.393 (4) | C15—H15 | 0.9500 |
| C4—C9 | 1.399 (4) | C15—C16 | 1.395 (4) |
| C5—H5 | 0.9500 | C16—H16 | 0.9500 |
| C5—C6 | 1.381 (4) | C16—C17 | 1.392 (4) |
| C6—H6 | 0.9500 | C17—H17 | 0.9500 |
| C6—C7 | 1.389 (4) | C17—C18 | 1.384 (4) |
| C7—C8 | 1.383 (4) | C18—H18 | 0.9500 |
| C8—H8 | 0.9500 | ||
| C3—S1—C1 | 89.91 (13) | O2—C10—C2 | 107.0 (2) |
| C10—O1—C11 | 112.6 (2) | O2—C10—H10 | 109.6 |
| C10—O2—C12 | 112.6 (2) | C2—C10—H10 | 109.6 |
| C1—N1—C2 | 111.2 (2) | O1—C11—H11A | 109.5 |
| N1—C1—S1 | 114.1 (2) | O1—C11—H11B | 109.5 |
| N1—C1—C4 | 124.2 (3) | O1—C11—H11C | 109.5 |
| C4—C1—S1 | 121.6 (2) | H11A—C11—H11B | 109.5 |
| N1—C2—C3 | 116.3 (2) | H11A—C11—H11C | 109.5 |
| N1—C2—C10 | 119.9 (2) | H11B—C11—H11C | 109.5 |
| C3—C2—C10 | 123.8 (3) | O2—C12—H12A | 109.5 |
| C2—C3—S1 | 108.4 (2) | O2—C12—H12B | 109.5 |
| C2—C3—C13 | 130.7 (3) | O2—C12—H12C | 109.5 |
| C13—C3—S1 | 120.8 (2) | H12A—C12—H12B | 109.5 |
| C5—C4—C1 | 121.6 (3) | H12A—C12—H12C | 109.5 |
| C5—C4—C9 | 119.2 (3) | H12B—C12—H12C | 109.5 |
| C9—C4—C1 | 119.2 (2) | C14—C13—C3 | 120.9 (2) |
| C4—C5—H5 | 119.4 | C14—C13—C18 | 119.3 (3) |
| C6—C5—C4 | 121.1 (3) | C18—C13—C3 | 119.8 (3) |
| C6—C5—H5 | 119.4 | C13—C14—H14 | 119.8 |
| C5—C6—H6 | 120.8 | C15—C14—C13 | 120.4 (3) |
| C5—C6—C7 | 118.4 (3) | C15—C14—H14 | 119.8 |
| C7—C6—H6 | 120.8 | C14—C15—H15 | 119.9 |
| C6—C7—Cl1 | 118.8 (2) | C14—C15—C16 | 120.3 (3) |
| C8—C7—Cl1 | 119.1 (2) | C16—C15—H15 | 119.9 |
| C8—C7—C6 | 122.1 (3) | C15—C16—H16 | 120.3 |
| C7—C8—H8 | 120.6 | C17—C16—C15 | 119.4 (3) |
| C7—C8—C9 | 118.8 (3) | C17—C16—H16 | 120.3 |
| C9—C8—H8 | 120.6 | C16—C17—H17 | 119.7 |
| C4—C9—H9 | 119.8 | C18—C17—C16 | 120.6 (3) |
| C8—C9—C4 | 120.5 (3) | C18—C17—H17 | 119.7 |
| C8—C9—H9 | 119.8 | C13—C18—H18 | 120.0 |
| O1—C10—C2 | 112.9 (2) | C17—C18—C13 | 120.0 (3) |
| O1—C10—H10 | 109.6 | C17—C18—H18 | 120.0 |
| O2—C10—O1 | 108.1 (2) | ||
| Cl1—C7—C8—C9 | 179.2 (2) | C3—C2—C10—O1 | 150.2 (3) |
| S1—C1—C4—C5 | 12.2 (4) | C3—C2—C10—O2 | −90.9 (3) |
| S1—C1—C4—C9 | −165.3 (2) | C3—C13—C14—C15 | −178.5 (3) |
| S1—C3—C13—C14 | −137.1 (2) | C3—C13—C18—C17 | 178.7 (2) |
| S1—C3—C13—C18 | 43.4 (3) | C4—C5—C6—C7 | 0.0 (4) |
| N1—C1—C4—C5 | −172.0 (3) | C5—C4—C9—C8 | −0.9 (4) |
| N1—C1—C4—C9 | 10.5 (4) | C5—C6—C7—Cl1 | −179.4 (2) |
| N1—C2—C3—S1 | −0.9 (3) | C5—C6—C7—C8 | −0.4 (4) |
| N1—C2—C3—C13 | 177.8 (3) | C6—C7—C8—C9 | 0.2 (4) |
| N1—C2—C10—O1 | −29.8 (3) | C7—C8—C9—C4 | 0.5 (4) |
| N1—C2—C10—O2 | 89.1 (3) | C9—C4—C5—C6 | 0.7 (4) |
| C1—S1—C3—C2 | 0.5 (2) | C10—C2—C3—S1 | 179.0 (2) |
| C1—S1—C3—C13 | −178.4 (2) | C10—C2—C3—C13 | −2.2 (5) |
| C1—N1—C2—C3 | 1.0 (3) | C11—O1—C10—O2 | 163.7 (2) |
| C1—N1—C2—C10 | −179.0 (2) | C11—O1—C10—C2 | −78.1 (3) |
| C1—C4—C5—C6 | −176.8 (2) | C12—O2—C10—O1 | −65.6 (3) |
| C1—C4—C9—C8 | 176.6 (2) | C12—O2—C10—C2 | 172.5 (2) |
| C2—N1—C1—S1 | −0.5 (3) | C13—C14—C15—C16 | −0.5 (4) |
| C2—N1—C1—C4 | −176.6 (2) | C14—C13—C18—C17 | −0.7 (4) |
| C2—C3—C13—C14 | 44.2 (4) | C14—C15—C16—C17 | −0.1 (4) |
| C2—C3—C13—C18 | −135.2 (3) | C15—C16—C17—C18 | 0.4 (4) |
| C3—S1—C1—N1 | 0.0 (2) | C16—C17—C18—C13 | 0.1 (4) |
| C3—S1—C1—C4 | 176.2 (2) | C18—C13—C14—C15 | 1.0 (4) |
| H··· | ||||
| C5—H5···S1 | 0.95 | 2.74 | 3.143 (3) | 106 |
| C6—H6··· | 0.95 | 2.81 | 3.620 (3) | 144 |
| C12—H12 | 0.98 | 2.81 | 3.406 (3) | 120 |
| C15—H15··· | 0.95 | 2.95 | 3.481 (3) | 117 |
| Contact | Distance | Symmetry operation |
| Cl1···H16 | 2.85 | 2 + |
| H18···Cl1 | 3.00 | 2 - |
| H11 | 2.50 | 1 + |
| H6···C17 | 2.97 | 1 - |
| O2···H11 | 2.65 | |
| C7···H17 | 2.85 | 1 + |
| C11···H8 | 3.04 | -1 + |