| Literature DB >> 36071849 |
Wenzhao Bao1, Li Qi2, Yin Bao1, Sai Wang2, Wei Li2.
Abstract
Background: Associations have been reported between sleep and irritable bowel syndrome (IBS). However, whether there exists a causation between them is still unknown.Entities:
Keywords: Mendelian randomization; causal inference; insomnia; irritable bowel syndrome; sleep disorder
Year: 2022 PMID: 36071849 PMCID: PMC9442781 DOI: 10.3389/fphar.2022.900788
Source DB: PubMed Journal: Front Pharmacol ISSN: 1663-9812 Impact factor: 5.988
Descriptive information of sleep-related data.
| Exposure | Ancestry | Sample size | Covariates | NSNP | R2 (%) | F | PMID |
|---|---|---|---|---|---|---|---|
| Insomnia | European | 345,022 cases and 108,357 controls | age, sex, 10 genetic principal components, and genotyping array | 44 | 0.43 | 44.09 | 30,804,566 |
| Sleep duration | European | 446,118 | age, sex, 10 genetic principal components, genotyping array and genetic relatedness matrix | 77 | 0.72 | 41.72 | 30,846,698 |
| Long sleep duration | European | 34,184 cases and 305,742 controls | age, sex, 10 genetic principal components, genotyping array and genetic relatedness matrix | 12 | 0.14 | 40.39 | 30,846,698 |
| Short sleep duration | European | 106,192 cases and 305,742 controls | age, sex, 10 genetic principal components, genotyping array and genetic relatedness matrix | 25 | 0.24 | 40.46 | 30,846,698 |
| Chronotype | European | 449,734 | age, sex, study center and genotyping array | 196 | 2.04 | 47.73 | 30,696,823 |
| Morning person | European | 252,287 cases and 150,908 controls | age, sex, study center and genotyping array | 147 | 1.64 | 45.73 | 30,696,823 |
| Daytime nap | European | 452,633 | age, sex, 10 genetic principal components, genotyping array and genetic correlation matrix | 114 | 1.25 | 50.27 | 33,568,662 |
| Snoring | European | 152,302 cases and 256,015 | age, sex, genotyping array and the first 20 genetic principal components | 43 | 0.41 | 39.40 | 32,060,260 |
FIGURE 1The principles and main design of this Mendelian randomization study. Notes: IV = instrumental variable; SNP = single nucleotide polymorphism; Ncase = the number of cases; Ncontrol = the number of controls.
FIGURE 2The Mendelian randomization results from both discovery and validation stages. Notes: NSNP = the number of single nucleotide polymorphism; OR = odds ratio; 95%LCI = the lower limit of 95% confidence interval; 95%UCI = the upper limit of 95% confidence interval.
Mendelian randomization results from weighted median and MR-PRESSO methods.
| Exposure | Stage | NSNP | Weighted median | MR-PRESSO | Pheterogeneity | Ppleiotropy | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR | 95%LCI | 95%UCI |
| OR | 95%LCI | 95%UCI |
| |||||
| Chronotype | Discovery | 196 | 0.81 | 0.74 | 0.88 | 0.00 | 0.81 | 0.76 | 0.86 | 0.00 | 0.00 | 0.20 |
| Insomnia | Discovery | 44 | 2.76 | 1.86 | 4.09 | 0.00 | 2.60 | 1.81 | 3.74 | 0.00 | 0.00 | 0.20 |
| Long sleep duration | Discovery | 12 | 0.36 | 0.09 | 1.39 | 0.14 | ------ | ------ | ------ | ------ | 0.86 | 0.41 |
| Morning person | Discovery | 146 | 0.89 | 0.84 | 0.94 | 0.00 | ------ | ------ | ------ | ------ | 0.02 | 0.43 |
| Daytime nap | Discovery | 114 | 1.12 | 0.87 | 1.43 | 0.37 | 1.15 | 0.94 | 1.41 | 0.17 | 0.00 | 0.07 |
| Short sleep duration | Discovery | 25 | 1.95 | 0.92 | 4.13 | 0.08 | 1.96 | 0.98 | 3.93 | 0.06 | 0.00 | 0.28 |
| Sleep duration | Discovery | 77 | 0.92 | 0.77 | 1.10 | 0.36 | 0.91 | 0.78 | 1.06 | 0.22 | 0.00 | 0.97 |
| Snoring | Discovery | 43 | 1.51 | 0.94 | 2.43 | 0.09 | 1.60 | 1.10 | 2.32 | 0.01 | 0.00 | 0.48 |
| Chronotype | Validation | 193 | 0.97 | 0.76 | 1.26 | 0.84 | ------ | ------ | ------ | ------ | 0.50 | 0.45 |
| Insomnia | Validation | 44 | 4.09 | 1.36 | 12.30 | 0.01 | ------ | ------ | ------ | ------ | 0.45 | 0.25 |
| Long sleep duration | Validation | 8 | 0.37 | 0.00 | 45.03 | 0.69 | ------ | ------ | ------ | ------ | 0.27 | 0.79 |
| Morning person | Validation | 147 | 1.05 | 0.89 | 1.25 | 0.56 | ------ | ------ | ------ | ------ | 0.26 | 0.28 |
| Daytime nap | Validation | 109 | 0.97 | 0.45 | 2.10 | 0.95 | ------ | ------ | ------ | ------ | 0.07 | 0.82 |
| Short sleep duration | Validation | 25 | 3.46 | 0.41 | 29.39 | 0.26 | ------ | ------ | ------ | ------ | 0.92 | 0.50 |
| Sleep duration | Validation | 76 | 1.11 | 0.63 | 1.95 | 0.71 | ------ | ------ | ------ | ------ | 0.11 | 0.60 |
| Snoring | Validation | 42 | 0.51 | 0.11 | 2.35 | 0.39 | ------ | ------ | ------ | ------ | 0.03 | 0.94 |
NSNP, the number of single nucleotide polymorphism; OR, odds ratio; 95%LCI, the lower limit of 95% confidence interval; 95%UCI, the upper limit of 95% confidence interval; P = the p-value of OR; Pheterogeneity = the p-value of heterogeneity test; Ppleiotropy = the p-value of horizontal pleiotropy test.
FIGURE 3The meta-analysis of Mendelian randomization estimates. Notes: OR = odds ratio; 95%LCI = the lower limit of 95% confidence interval; 95%UCI = the upper limit of 95% confidence interval; P = the p-value of OR.