Literature DB >> 36071243

Exome sequencing for structurally normal fetuses-yields and ethical issues.

Hagit Daum1,2, Tamar Harel3,4, Talya Millo3, Avital Eilat3,4, Duha Fahham3,4, Shiri Gershon-Naamat3, Adily Basal3, Chaggai Rosenbluh3, Nili Yanai5, Shay Porat5, Doron Kabiri5, Simcha Yagel5, Dan V Valsky5, Orly Elpeleg3,4, Vardiella Meiner3,4, Hagar Mor-Shaked6,7.   

Abstract

The yield of chromosomal microarray analysis (CMA) is well established in structurally normal fetuses (0.4-1.4%). We aimed to determine the incremental yield of exome sequencing (ES) in this population. From February 2017 to April 2022, 1,526 fetuses were subjected to ES; 482 of them were structurally normal (31.6%). Only pathogenic and likely pathogenic (P/LP) variants, per the American College of Medical Genetics and Genomics (ACMG) classification, were reported. Additionally, ACMG secondary findings relevant to childhood were reported. Four fetuses (4/482; 0.8%) had P/LP variants indicating a moderate to severe disease in ATP7B, NR2E3, SPRED1 and FGFR3, causing Wilson disease, Enhanced S-cone syndrome, Legius and Muenke syndromes, respectively. Two fetuses had secondary findings, in RET and DSP. Our data suggest that offering only CMA for structurally normal fetuses may provide false reassurance. Prenatal ES mandates restrictive analysis and careful management combined with pre and post-test genetic counseling.
© 2022. The Author(s), under exclusive licence to European Society of Human Genetics.

Entities:  

Year:  2022        PMID: 36071243     DOI: 10.1038/s41431-022-01169-9

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   5.351


  39 in total

1.  Whole-exome sequencing in the evaluation of fetal structural anomalies: a prospective cohort study.

Authors:  Slavé Petrovski; Vimla Aggarwal; Jessica L Giordano; Melissa Stosic; Karen Wou; Louise Bier; Erica Spiegel; Kelly Brennan; Nicholas Stong; Vaidehi Jobanputra; Zhong Ren; Xiaolin Zhu; Caroline Mebane; Odelia Nahum; Quanli Wang; Sitharthan Kamalakaran; Colin Malone; Kwame Anyane-Yeboa; Russell Miller; Brynn Levy; David B Goldstein; Ronald J Wapner
Journal:  Lancet       Date:  2019-01-31       Impact factor: 79.321

2.  Clinical exome sequencing for genetic identification of rare Mendelian disorders.

Authors:  Hane Lee; Joshua L Deignan; Naghmeh Dorrani; Samuel P Strom; Sibel Kantarci; Fabiola Quintero-Rivera; Kingshuk Das; Traci Toy; Bret Harry; Michael Yourshaw; Michelle Fox; Brent L Fogel; Julian A Martinez-Agosto; Derek A Wong; Vivian Y Chang; Perry B Shieh; Christina G S Palmer; Katrina M Dipple; Wayne W Grody; Eric Vilain; Stanley F Nelson
Journal:  JAMA       Date:  2014-11-12       Impact factor: 56.272

3.  Chromosomal microarray vs. NIPS: analysis of 5541 low-risk pregnancies.

Authors:  Lena Sagi-Dain; Lital Cohen Vig; Sarit Kahana; Shiri Yacobson; Tamar Tenne; Ifat Agmon-Fishman; Cochava Klein; Reut Matar; Lina Basel-Salmon; Idit Maya
Journal:  Genet Med       Date:  2019-05-24       Impact factor: 8.822

Review 4.  Diagnostic yield of exome sequencing in fetuses with multisystem malformations: systematic review and meta-analysis.

Authors:  M Pauta; R J Martinez-Portilla; A Borrell
Journal:  Ultrasound Obstet Gynecol       Date:  2022-06       Impact factor: 8.678

5.  Prenatal exome sequencing analysis in fetal structural anomalies detected by ultrasonography (PAGE): a cohort study.

Authors:  Jenny Lord; Dominic J McMullan; Ruth Y Eberhardt; Gabriele Rinck; Susan J Hamilton; Elizabeth Quinlan-Jones; Elena Prigmore; Rebecca Keelagher; Sunayna K Best; Georgina K Carey; Rhiannon Mellis; Sarah Robart; Ian R Berry; Kate E Chandler; Deirdre Cilliers; Lara Cresswell; Sandra L Edwards; Carol Gardiner; Alex Henderson; Simon T Holden; Tessa Homfray; Tracy Lester; Rebecca A Lewis; Ruth Newbury-Ecob; Katrina Prescott; Oliver W Quarrell; Simon C Ramsden; Eileen Roberts; Dagmar Tapon; Madeleine J Tooley; Pradeep C Vasudevan; Astrid P Weber; Diana G Wellesley; Paul Westwood; Helen White; Michael Parker; Denise Williams; Lucy Jenkins; Richard H Scott; Mark D Kilby; Lyn S Chitty; Matthew E Hurles; Eamonn R Maher
Journal:  Lancet       Date:  2019-01-31       Impact factor: 202.731

6.  Clinical exome sequencing in 509 Middle Eastern families with suspected Mendelian diseases: The Qatari experience.

Authors:  Nader Al-Dewik; Howaida Mohd; Mariam Al-Mureikhi; Rehab Ali; Fatma Al-Mesaifri; Laila Mahmoud; Noora Shahbeck; Karen El-Akouri; Mariam Almulla; Reem Al Sulaiman; Sara Musa; Ajayeb Al-Nabet Al-Marri; Gabriele Richard; Jane Juusola; Benjamin D Solomon; Fowzan S Alkuraya; Tawfeg Ben-Omran
Journal:  Am J Med Genet A       Date:  2019-03-27       Impact factor: 2.802

7.  Benefit versus risk of chromosomal microarray analysis performed in pregnancies with normal and positive prenatal screening results: A retrospective study.

Authors:  Rami Moshonov; Keren Hod; Bella Azaria; Ifat Abadi-Korek; Rachel Berger; Mordechai Shohat
Journal:  PLoS One       Date:  2021-04-26       Impact factor: 3.240

8.  Diagnostic yield of exome sequencing for prenatal diagnosis of fetal structural anomalies: A systematic review and meta-analysis.

Authors:  Rhiannon Mellis; Kathryn Oprych; Elizabeth Scotchman; Melissa Hill; Lyn S Chitty
Journal:  Prenat Diagn       Date:  2022-05-07       Impact factor: 3.242

9.  Universal chromosomal microarray analysis reveals high proportion of copy-number variants in low-risk pregnancies.

Authors:  S Stern; N Hacohen; V Meiner; S Yagel; S Zenvirt; S Shkedi-Rafid; M Macarov; D V Valsky; S Porat; N Yanai; A Frumkin; H Daum
Journal:  Ultrasound Obstet Gynecol       Date:  2021-04-05       Impact factor: 7.299

10.  First-line exome sequencing in Palestinian and Israeli Arabs with neurological disorders is efficient and facilitates disease gene discovery.

Authors:  Holger Hengel; Rebecca Buchert; Marc Sturm; Tobias B Haack; Yvonne Schelling; Muhammad Mahajnah; Rajech Sharkia; Abdussalam Azem; Ghassan Balousha; Zaid Ghanem; Mohammed Falana; Osama Balousha; Suhail Ayesh; Reinhard Keimer; Werner Deigendesch; Jimmy Zaidan; Hiyam Marzouqa; Peter Bauer; Ludger Schöls
Journal:  Eur J Hum Genet       Date:  2020-03-25       Impact factor: 5.351

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