| Literature DB >> 36052302 |
Nadia Al-Ramahi1, Mohammad A A Al-Najjar2, Abdalluh Jabaley1, Rajaa Al-Qudah3, Iman Basheti3.
Abstract
In this work, variation in microbiota in the lower respiratory tract (LRT) among asthmatic and non-asthmatic subjects is identified. All participants (27 asthmatic patients and 27 non-asthmatic subjects) were asked to expectorate a sputum sample in special sterile tubes after rinsing the mouth with a sterilizing solution. The expectorated sputum specimen was immediately homogenized and stored in the deep freezer for DNA extraction for microbial gene sequencing and sequence analyses. For sequencing the V4 region of the 16S rRNA gene was sequenced using Illumina MiSeq, followed by an analysis of alpha and beta diversity. It was found that asthmatic patients had greater bacterial diversity than non-asthmatic subjects. Bacteria associated to the phyla (Bacteroidetes, Proteobacteria, and Firmicutes) accounted for 90 % of all sequences. The relative abundance of Proteobacteria in the asthmatic patients was higher than that of non-asthmatic (30 % vs 17 %; P-value = 0.044), along with a high abundance of the pathogen Haemophilus influenza. In contrast, Firmicutes (41 %) and Bacteroidetes (31 %) showed higher relative abundances in the non-asthmatic subjects. No significant link was found between the type of asthma drug or the method of drug usage (orally or via inhalation) and the respiratory microbiota. Therefore, the variations in LRS microbiota are not caused by the drugs taken by the asthmatic patients, rather they might be connected to the etiology of asthma. Since the asthmatic patients had higher proportions of Haemophilus influenzae, these organisms could be a causative factor in the pathophysiology of asthma.Entities:
Keywords: Asthma; Haemophilus influenzae; Inhalers; Oral corticosteroids; Respiratory microbiota
Year: 2022 PMID: 36052302 PMCID: PMC9424575 DOI: 10.1016/j.sjbs.2022.103406
Source DB: PubMed Journal: Saudi J Biol Sci ISSN: 2213-7106 Impact factor: 4.052
Demographic characteristics of the study subjects (n = 54).
| Asthmatic n = 27 (50 %) | Non-asthmatic n = 27 (50 %) | Total | P-value* | |
|---|---|---|---|---|
| 44.85 ± 17.04 | 22.66 ± 8.29 | 33.75 ± 17.36 | <0.001b* | |
| aChi-square test, Fisher’s test | ||||
Fig. 1Bacterial diversity in samples from the asthmatic (n = 27) and non-asthmatic (n = 27) subjects using Shannon Index (P value = 0.009).
Fig. 2Relative abundance for bacterial phyla in samples from asthmatic (A) and non-asthmatic subjects (B).
Fig. 3Relative abundance of bacterial families in samples from asthmatic patients (n = 27) and healthy controls (n = 27).
Fig. 4Relative abundance of different in genera found in the asthmatic (A) and non-asthmatic subjects (B).
Fig. 5heat map of operational taxonomic units (OTUs) found in the sputum of asthmatics (n = 27) and non-asthmatic healthy subjects (n = 27). On the figure, increased depth of the colour indicates relative abundance of the OTU in an individual sample.