Literature DB >> 36051227

Transcript profiling of glutathione metabolizing genes reveals abiotic stress and glutathione-specific alteration in Arabidopsis and rice.

Ajit Ghosh1, Md Sifatul Islam1, Nazmir Binta Alam2, Ananda Mustafiz2, Tahmina Islam3.   

Abstract

Homoeostasis of glutathione (GSH) is crucial for plant survival and adaptability against stress. Despite the presence of complete Arabidopsis and rice genome sequence, the comprehensive analysis of the GSH metabolizing genes is still missing. This research concentrated on the comprehensive understanding of GSH metabolizing genes in two model plants-Arabidopsis and rice in terms of their subcellular localization, exon-intron distribution, protein domain structure, and transcript abundance. Expression profiling using the microarray data provided significant evidence of their participation in response to various abiotic stress conditions. Besides, some of these GSH metabolizing genes revealed their expression alteration in several developmental changes and tissue diversification. The presence of various stress-specific cis-regulatory elements in the promoter region of GSH metabolizing genes could be directly correlated with their stress-specific transcript alteration. Moreover, the application of exogenous GSH significantly downregulated GSH synthesizing genes and upregulated GSH metabolizing genes in Arabidopsis with few exceptions indicating a product-dependent regulation of GSH metabolizing genes. Interestingly, validation of rice GSH metabolizing genes in response to drought and salinity showed an almost similar pattern of expression in quantitative real-time as observed by microarray data. Altogether, GSH metabolizing members are a promising and underutilized genetic source for plant improvement that could be used to enhance stress tolerance in plants. Supplementary Information: The online version contains supplementary material available at 10.1007/s12298-022-01220-5. © Prof. H.S. Srivastava Foundation for Science and Society 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Entities:  

Keywords:  Expression analysis; Glutathione metabolism; Homoeostasis; Plant; Product-dependent regulation

Year:  2022        PMID: 36051227      PMCID: PMC9424389          DOI: 10.1007/s12298-022-01220-5

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  52 in total

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2.  Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.

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Journal:  Antioxid Redox Signal       Date:  2005 Jul-Aug       Impact factor: 8.401

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Journal:  Plant Physiol       Date:  2008-09-03       Impact factor: 8.340

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Authors:  M J May; T Vernoux; R Sánchez-Fernández; M Van Montagu; D Inzé
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

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Authors:  Ashley Galant; Mary L Preuss; Jeffrey C Cameron; Joseph M Jez
Journal:  Front Plant Sci       Date:  2011-09-05       Impact factor: 5.753

10.  Genome-wide analysis and expression profiling of glyoxalase gene families in soybean (Glycine max) indicate their development and abiotic stress specific response.

Authors:  Ajit Ghosh; Tahmina Islam
Journal:  BMC Plant Biol       Date:  2016-04-16       Impact factor: 4.215

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