Literature DB >> 36047779

Draft Genome Sequences of the Kocuria subflava Type Strain KCTC 39547 and Kocuria sp. Strain JC486, a Newly Isolated Strain from a Wild Ass Sanctuary in Gujarat, India.

Jagadeeshwari Uppada1, Sasikala Chintalapati1, Karthika K1, Venkata Ramana Chintapati2.   

Abstract

Here, we report a 2.86-Mbp genome sequence of Kocuria sp. strain JC486, which was isolated from a salt marsh, and a 3.03-Mbp sequence of the type strain Kocuria subflava KCTC 39547. Prediction from their genomes indicates that both strains are nonpathogenic.

Entities:  

Year:  2022        PMID： 36047779      PMCID： PMC9584308          DOI： 10.1128/mra.00535-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  13 in total

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Authors:  Kazutaka Katoh; Daron M Standley
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Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

5.  Kocuria subflava sp. nov., isolated from marine sediment from the Indian Ocean.

Authors:  Zhao Jiang; Wei-Hua Zhang; Chang-Guo Yuan; Jia-Yang Chen; Li-Xiang Cao; Dong-Jin Park; Min Xiao; Chang-Jin Kim; Wen-Jun Li
Journal:  Antonie Van Leeuwenhoek       Date:  2015-09-11       Impact factor: 2.271

6.  Accelerated Profile HMM Searches.

Authors:  Sean R Eddy
Journal:  PLoS Comput Biol       Date:  2011-10-20       Impact factor: 4.475

7.  PathogenFinder--distinguishing friend from foe using bacterial whole genome sequence data.

Authors:  Salvatore Cosentino; Mette Voldby Larsen; Frank Møller Aarestrup; Ole Lund
Journal:  PLoS One       Date:  2013-10-28       Impact factor: 3.240

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Authors:  Seok-Hwan Yoon; Sung-Min Ha; Soonjae Kwon; Jeongmin Lim; Yeseul Kim; Hyungseok Seo; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-30       Impact factor: 2.747

9.  Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing.

Authors:  Ann-Marie Patch; Katia Nones; Stephen H Kazakoff; Felicity Newell; Scott Wood; Conrad Leonard; Oliver Holmes; Qinying Xu; Venkateswar Addala; Jenette Creaney; Bruce W Robinson; Shujin Fu; Chunyu Geng; Tong Li; Wenwei Zhang; Xinming Liang; Junhua Rao; Jiahao Wang; Mingyu Tian; Yonggang Zhao; Fei Teng; Honglan Gou; Bicheng Yang; Hui Jiang; Feng Mu; John V Pearson; Nicola Waddell
Journal:  PLoS One       Date:  2018-01-10       Impact factor: 3.240

10.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971
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