Literature DB >> 36043865

Draft Genome Sequence of Virgibacillus sp. Strain AGTR, Isolated from Hypersaline Lake Acıgöl in Turkey.

Meryem Menekse Kılıc1,2,3, Nurgul Balci4, Nevin Gul Karaguler1,2.   

Abstract

Virgibacillus sp. strain AGTR, which is a haloalkaliphilic microorganism, was isolated from a sediment sample collected in hypersaline Lake Acıgöl in Turkey. It has the potential to produce biotechnologically essential proteases. Here, the whole-genome sequence and its annotations are reported.

Entities:  

Year:  2022        PMID： 36043865      PMCID： PMC9584221          DOI： 10.1128/mra.00555-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  11 in total

1.  ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences.

Authors:  Dean Laslett; Bjorn Canback
Journal:  Nucleic Acids Res       Date:  2004-01-02       Impact factor: 16.971

2.  Prokka: rapid prokaryotic genome annotation.

Authors:  Torsten Seemann
Journal:  Bioinformatics       Date:  2014-03-18       Impact factor: 6.937

3.  "Recombinant cold -adapted halotolerant, organic solvent-stable esterase (estHIJ) from Bacillus halodurans.

Authors:  Nehad Noby; Ahmed Hussein; Hesham Saeed; Amira M Embaby
Journal:  Anal Biochem       Date:  2019-12-18       Impact factor: 3.365

4.  Thermal stability and catalytic properties of protease from Bacillus sp. P45 active in organic solvents and ionic liquid.

Authors:  Thais M de Borba; Taiele B Machado; Adriano Brandelli; Susana J Kalil
Journal:  Biotechnol Prog       Date:  2018-07-31

5.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

6.  Fast filtering for RNA homology search.

Authors:  Diana L Kolbe; Sean R Eddy
Journal:  Bioinformatics       Date:  2011-09-28       Impact factor: 6.937

7.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

8.  Application of the Whole Genome-Based Bacterial Identification System, TrueBac ID, Using Clinical Isolates That Were Not Identified With Three Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) Systems.

Authors:  Sung Min Ha; Chang Ki Kim; Juhye Roh; Jung Hyun Byun; Seung Jo Yang; Seon Bin Choi; Jongsik Chun; Dongeun Yong
Journal:  Ann Lab Med       Date:  2019-11       Impact factor: 3.464

9.  A Novel Halotolerant Thermoalkaliphilic Esterase from Marine Bacterium Erythrobacter seohaensis SW-135.

Authors:  Ying-Yi Huo; Zhen Rong; Shu-Ling Jian; Cao-Di Xu; Jixi Li; Xue-Wei Xu
Journal:  Front Microbiol       Date:  2017-11-22       Impact factor: 5.640
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.