Literature DB >> 36037354

The pathway for coenzyme M biosynthesis in bacteria.

Hsin-Hua Wu1,2, Michael D Pun2, Courtney E Wise3, Bennett R Streit4, Florence Mus1, Anna Berim1, William M Kincannon4, Abdullah Islam1, Sarah E Partovi4, David R Gang1, Jennifer L DuBois4, Carolyn E Lubner3, Clifford E Berkman2, B Markus Lange1,5, John W Peters1.   

Abstract

Mercaptoethane sulfonate or coenzyme M (CoM) is the smallest known organic cofactor and is most commonly associated with the methane-forming step in all methanogenic archaea but is also associated with the anaerobic oxidation of methane to CO2 in anaerobic methanotrophic archaea and the oxidation of short-chain alkanes in Syntrophoarchaeum species. It has also been found in a small number of bacteria capable of the metabolism of small organics. Although many of the steps for CoM biosynthesis in methanogenic archaea have been elucidated, a complete pathway for the biosynthesis of CoM in archaea or bacteria has not been reported. Here, we present the complete CoM biosynthesis pathway in bacteria, revealing distinct chemical steps relative to CoM biosynthesis in methanogenic archaea. The existence of different pathways represents a profound instance of convergent evolution. The five-step pathway involves the addition of sulfite, the elimination of phosphate, decarboxylation, thiolation, and the reduction to affect the sequential conversion of phosphoenolpyruvate to CoM. The salient features of the pathway demonstrate reactivities for members of large aspartase/fumarase and pyridoxal 5'-phosphate-dependent enzyme families.

Entities:  

Keywords:  CoM biosynthesis; PLP-dependent cysteine desulfhydrase; Xanthobacter autotrophicus; aspartase/fumarase superfamily; sulfonate

Mesh:

Substances:

Year:  2022        PMID: 36037354      PMCID: PMC9457059          DOI: 10.1073/pnas.2207190119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  40 in total

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Authors:  J G Krum; S A Ensign
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

2.  Specificity and biological distribution of coenzyme M (2-mercaptoethanesulfonic acid).

Authors:  W E Balch; R S Wolfe
Journal:  J Bacteriol       Date:  1979-01       Impact factor: 3.490

3.  Identification of coenzyme M biosynthetic 2-phosphosulfolactate phosphatase. A member of a new class of Mg(2+)-dependent acid phosphatases.

Authors:  D E Graham; M Graupner; H Xu; R H White
Journal:  Eur J Biochem       Date:  2001-10

4.  Convergent evolution of coenzyme M biosynthesis in the Methanosarcinales: cysteate synthase evolved from an ancestral threonine synthase.

Authors:  David E Graham; Stephanie M Taylor; Rachel Z Wolf; Seema C Namboori
Journal:  Biochem J       Date:  2009-12-10       Impact factor: 3.857

5.  Synthesis of sulfonic acid derivatives by oxidative deprotection of thiols using tert-butyl hypochlorite.

Authors:  Yoann Joyard; Cyril Papamicaël; Pierre Bohn; Laurent Bischoff
Journal:  Org Lett       Date:  2013-04-19       Impact factor: 6.005

Review 6.  The genetics of convergent evolution: insights from plant photosynthesis.

Authors:  Karolina Heyduk; Jose J Moreno-Villena; Ian S Gilman; Pascal-Antoine Christin; Erika J Edwards
Journal:  Nat Rev Genet       Date:  2019-08       Impact factor: 53.242

7.  Elucidation of gibberellin biosynthesis in bacteria reveals convergent evolution.

Authors:  Ryan S Nett; Mariana Montanares; Ariana Marcassa; Xuan Lu; Raimund Nagel; Trevor C Charles; Peter Hedden; Maria Cecilia Rojas; Reuben J Peters
Journal:  Nat Chem Biol       Date:  2016-11-14       Impact factor: 15.040

Review 8.  Overview of Diverse Methyl/Alkyl-Coenzyme M Reductases and Considerations for Their Potential Heterologous Expression.

Authors:  Aleksei Gendron; Kylie D Allen
Journal:  Front Microbiol       Date:  2022-04-25       Impact factor: 6.064

9.  Structural and mutational studies on substrate specificity and catalysis of Salmonella typhimurium D-cysteine desulfhydrase.

Authors:  Sakshibeedu R Bharath; Shveta Bisht; Rajesh K Harijan; Handanahal S Savithri; Mathur R N Murthy
Journal:  PLoS One       Date:  2012-05-04       Impact factor: 3.240

10.  Genomic characterization of methanomicrobiales reveals three classes of methanogens.

Authors:  Iain Anderson; Luke E Ulrich; Boguslaw Lupa; Dwi Susanti; Iris Porat; Sean D Hooper; Athanasios Lykidis; Magdalena Sieprawska-Lupa; Lakshmi Dharmarajan; Eugene Goltsman; Alla Lapidus; Elizabeth Saunders; Cliff Han; Miriam Land; Susan Lucas; Biswarup Mukhopadhyay; William B Whitman; Carl Woese; James Bristow; Nikos Kyrpides
Journal:  PLoS One       Date:  2009-06-04       Impact factor: 3.240

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