| Literature DB >> 36017493 |
Birte Möhlendick1, Kristina Schönfelder2, Christoph Zacher1, Carina Elsner3, Hana Rohn4, Margarethe J Konik4, Laura Thümmler4,5, Vera Rebmann5, Monika Lindemann5, Karl-Heinz Jöckel6, Winfried Siffert1.
Abstract
Background and aims: Albeit several factors which influence the outcome of corona virus disease (COVID-19) are already known, genetic markers which may predict the outcome of the disease in hospitalized patients are still very sparse. Thus, in this study, we aimed to analyze whether the single-nucleotide polymorphism (SNP) rs5443 in the gene GNB3, which was associated with higher T cell responses in previous studies, might be a suitable biomarker to predict T cell responses and the outcome of COVID-19 in a comprehensive German cohort.Entities:
Keywords: COVID-19; G protein; GNB3; SARS-CoV-2; T cell response; disease severity; genetic association; rs5443
Year: 2022 PMID: 36017493 PMCID: PMC9395599 DOI: 10.3389/fgene.2022.960731
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.772
Demographics, clinical characteristics, and outcome of the disease in SARS-CoV-2-positive patients. Classification according to the COVID-19 surveillance report of the ECDC: category “mild” is a case that has not been reported as hospitalized or dead. A “severe” case has been admitted to intensive care and/or required mechanical respiratory support. All values are given in medians and interquartile ranges (IQR), except from sex and medical history, which are reported in absolute counts and percentages.
| Characteristics | All patients ( | Mild( | Hospitalized( | Severe( | Fatal( |
|
|---|---|---|---|---|---|---|
| Age–years | 62.0 (49.0–76.0) | 47.0 (34.5–64.0) | 62.0 (48.3–76.0) | 59.0 (50.0–70.0) | 71.0 (59.5–82.0) |
|
| Male sex | 910 (58.0) | 107 (52.2) | 416 (54.7) | 185 (63.4) | 202 (64.5) |
|
| Medical history | ||||||
| Cardiovascular system | 547 (34.8) | 11 (5.4) | 257 (33.8) | 111 (38.0) | 168 (53.7) |
|
| Arterial hypertension | 748 (47.6) | 29 (14.1) | 373 (49.1) | 149 (51.0) | 197 (62.9) |
|
| Diabetes mellitus | 404 (25.7) | 14 (6.8) | 214 (28.2) | 76 (26.0) | 100 (31.9) |
|
| Hematological parameters | ||||||
| Erythrocytes/nl | 4.4 (3.8–4.8) | 4.6 (4.2–4.9) | 4.4 (4.0–4.9) | 4.4 (3.8–4.8) | 4.0 (3.4–4.6) |
|
| Platelets/nl | 202.0 (156.0–260.0) | 204.0 (164.0–270.5) | 205.0 (157.0–255.0) | 209.0 (169.0–292.0) | 189.0 (135.0–242.0) |
|
| Neutrophils/nl | 4.9 (3.1–7.5) | 3.7 (2.7–5.1) | 3.9 (2.6–5.8) | 6.3 (4.2–9.3) | 7.7 (5.2–11.7) |
|
| Lymphocytes/nl | 0.9 (0.7–1.3) | 1.1 (0.9–1.5) | 1.0 (0.7–1.4) | 0.8 (0.6–1.1) | 0.7 (0.5–1.1) |
|
| Inflammatory markers | ||||||
| NLR | 5.0 (2.9–9.9) | 3.1 (2.1–4.7) | 3.8 (2.4–6.2) | 7.9 (4.5–13.0) | 11.1 (6.0–18.5) |
|
| PLR | 217.8 (151.1–326.7) | 176.3 (139.1–268.9) | 197.7 (140.7–285.5) | 269.8 (181.4–418.4) | 252.6 (162.9–414.2) |
|
| SII | 1031.0 (523.9–2206.0) | 717.2 (385.7–1055.0) | 769.6 (399.8–1417.0) | 1680 (921.9–3466.0) | 1917.0 (1010.0–4019.0) |
|
Cardiovascular system: for example, myocardial infarction, coronary heart disease but not arterial hypertension. Abbreviations: nl = nanoliter; NLR, neutrophil–lymphocyte ratio; PLR, platelet–lymphocyte ratio; SII, systemic immune-inflammation index.
FIGURE 1(A) IFN-γ ELISpot responses to S1/S2 protein of SARS-CoV-2 per 250,000 peripheral blood mononuclear cells stratified by COVID-19 severity. Due to the low number of cases in the individual groups, patients from the categories “mild” and “hospitalized” were grouped together to the group “moderate,” whereas the patients with “severe” and “fatal” COVID-19 were consolidated to the group “serious.” There was a significant decline of IFN-γ spots increment comparing the “serious” (N = 21, median = 9.5, and IQR = 6.8–19.3) to the “moderate” (N = 161, median = 13.5, and IQR = 8.0–35.0) groups (p = 0.04). (B) IFN-γ ELISpot responses to S1/S2 protein of SARS-CoV-2 per 250,000 peripheral blood mononuclear cells stratified by the GNB3 rs5443 genotype. Individuals with the TT genotype had significantly higher spots increment (median = 18.5, and IQR = 8.9–35.4) compared to CT (median = 8.5, IQR = 5.0–24.4, and p = 0.01) or CC genotype carriers (median = 10.0, IQR = 5.1–19.0, and p = 0.01). Abbreviations: IFN-γ = interferon gamma; PBMC = peripheral blood mononuclear cells; IQR = interquartile range.
GNB3 rs5443 (c.825C>T) genotype distribution among all patients with SARS-CoV-2 infection and subdivided according to the severity of COVID-19.
| All patients ( | Mild( | Hospitalized( | Severe( | Fatal( | |
|---|---|---|---|---|---|
|
| 700 (44.6) | 89 (43.4) | 330 (43.4) | 121 (41.4) | 160 (51.1) |
|
| 666 (42.4) | 90 (43.9) | 324 (42.6) | 130 (44.5) | 122 (39.0) |
|
| 204 (13.0) | 26 (12.7) | 106 (13.9) | 41 (14.0) | 31 (9.9) |
| Minor allele frequency (T) | 0.34 | 0.35 | 0.35 | 0.36 | 0.29 |
Protective factors against COVID-19 fatality. Abbreviations: nl = nanoliter; NLR = neutrophil-lymphocyte ratio; PLR = platelet-lymphocyte ratio; SII = systemic immune-inflammation index; OR = odds ratio; CI = confidence interval, NS = not significant in stepwise multivariable analysis.
| Univariate analysis | Multivariable analysis | |||
|---|---|---|---|---|
|
|
|
|
|
|
| Age (<62 years) | 0.35 (0.27–0.45) | <0.0001 | 0.47 [0.34–0.64) | <0.0001 |
| Sex (female) | 0.71 (0.55–0.92) | 0.01 | NS | NS |
| Absence of | ||||
| Diseases of cardiovascular system | 0.41 (0.32–0.53) | <0.0001 | NS | NS |
| Arterial hypertension | 0.53 (0.41–0.68) | <0.0001 | NS | NS |
| Diabetes mellitus | 0.75 (0.57–0.98) | 0.04 | NS | NS |
| Hematological parameters | ||||
| Erythrocytes (≥4.0/nl) | 0.27 (0.21–0.34) | <0.0001 | 0.70 (0.52–0.94) | 0.02 |
| Platelets (≥133.5/nl) | 0.40 (0.29–0.54) | <0.0001 | 0.42 (0.30–0.60) | <0.0001 |
| Neutrophils (≤6.6/nl) | 0.28 (0.21–0.36) | <0.0001 | 0.32 (0.23–0.45) | <0.0001 |
| Lymphocytes (≥0.9/nl) | 0.41 (0.32–0.53) | <0.0001 | 0.55 (0.41–0.74) | <0.0001 |
| Inflammatory markers | ||||
| NLR (<7.3) | 0.24 (0.18–0.31) | <0.0001 | NS | NS |
| PLR (<224.6) | 0.60 (0.46–0.78) | <0.0001 | NS | NS |
| SII (<1206.4) | 0.32 (0.24–0.42) | <0.0001 | NS | NS |
|
| 0.60 (0.40–0.92) | 0.02 | 0.65 (0.44–0.96) | 0.03 |