| Literature DB >> 36012230 |
Marta Baczewska1, Elżbieta Supruniuk2, Klaudia Bojczuk1, Paweł Guzik3, Patrycja Milewska4, Katarzyna Konończuk5, Jakub Dobroch1, Adrian Chabowski2, Paweł Knapp1,6.
Abstract
Ovarian cancer is a non-homogenous malignancy. High-grade serous carcinoma (HGSC) is the most common subtype, and its drug resistance mechanisms remain unclear. Despite the advantages of modern pharmacotherapy, high-grade ovarian cancer is associated with a poor prognosis and research into targeted therapies is in progress. The aim of the study was to assess the dominant energy substrate transport mechanism in ovarian cancer cells and to verify whether genomic aberrations could predict clinical outcomes using the Cancer Genome Atlas (TCGA) dataset. Total RNA was extracted from HGSC frozen tissues, and the expression of selected genes was compared to respective controls. GLUT1, FABPpm, MCT4 and SNAT1 genes were significantly overexpressed in carcinomas compared with controls, while expression of CD36/SR-B2, FATP1, FABP4, GLUT4, ASCT2 and LPL was decreased. No differences were found in FATP4, LAT1, MCT1 and FASN. The transcript content of mitochondrial genes such as PGC-1α, TFAM and COX4/1 was similar between groups, while the β-HAD level declined in ovarian cancer. Additionally, the MCT4 level was reduced and PGC-1α was elevated in cancer tissue from patients with 'small' primary tumor and omental invasion accompanied by ascites as compared to patients that exhibited greater tendencies to metastasize to lymph nodes with clear omentum. Based on TCGA, higher FABP4 and LPL and lower TFAM expression indicated poorer overall survival in patients with ovarian cancer. In conclusion, the presented data show that there is no exclusive energy substrate in HGSC. However, this study indicates the advantage of glucose and lactate transport over fatty acids, thereby suggesting potential therapeutic intervention targets to impede ovarian cancer growth.Entities:
Keywords: amino acid transporters; fatty acid transporters; glucose transporters; monocarboxylate transporter; ovarian cancer
Mesh:
Substances:
Year: 2022 PMID: 36012230 PMCID: PMC9408757 DOI: 10.3390/ijms23168968
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 6.208
Study and control group characteristics. Values are presented as median and interquartile range.
| Control | Ovarian Cancer |
| |
|---|---|---|---|
| Total | n = 14 | n = 27 | - |
| BMI (kg/m2) | 26.67 (24.92–28.72) | 27.89 (24.85–33.53) | 0.32 |
1 Calculated using the formula π/6 × length × width × height. Abbreviations: BMI, body mass index; Ca125, cancer antigen 125; DBP, diastolic blood pressure; PLT, platelet count; SBP, systolic blood pressure; TSH, thyroid stimulating hormone.
Histopathological characteristics of study group.
| n | |
|---|---|
| Total | 27 |
| FIGO I | 2 |
| FIGO II | 2 |
| FIGO III | 20 |
| FIGO IV | 3 |
| BRCA 1/2 mutation | 4 |
| p53 | 14/19 1 |
| Wilms tumor gene product (WT1) | 13/15 |
| p16 | 1/2 |
| Vimentin | 0/6 |
| Estrogen receptors (ERs) | 5/12 |
| Progesterone receptors (PRs) | 2/5 |
| Nodal invasion | 15/27 |
| Omentum ‘omental-cake’ 2 | 12/27 |
| Nodal invasion > omental invasion 3 | 3 |
| Nodal invasion < omental invasion 4 | 7 |
| Cancer cells in peritoneal fluid | 14 |
1 x/y; x: number of positive samples, y: number of checked samples, if not all from study group. 2 ‘Omental cake’ is a specific term used to describe this serious peritoneal disease with a mass-like feature 3 Number of lymph nodes involved >50% and omentum clear 4 Number of lymph nodes involved <50% and ‘omental cake’
Figure 1Transcript levels of (a) cluster of differentiation 36/a scavenger receptor class B protein, (b) membrane associated fatty acid binding protein, (c) fatty acid transport protein 1, (d) fatty acid transport protein 4, (e) fatty acid binding protein 4, (f) glucose transporter 1, (g) glucose transporter 4, (h) monocarboxylate transporter 1, (i) monocarboxylate transporter 4, (j) Na+-independent neutral amino acid transporter, (k) Na+-dependent neutral amino acid transporter and (l) Na+-coupled neutral amino acid transporter 1 in ovarian control (n = 14) and cancer tissue (n = 27). Measurements were made in duplicate, and arithmetic means were used for subsequent investigation. Results are expressed in arbitrary units with control set as 1 and presented as median (min to max) value. Differences statistically significant at: * p < 0.05, ** p < 0.01, **** p < 0.0001.
Relative gene expression in relation to clinical–pathological parameters. The values are presented as median (min–max).
| Gene | FIGO I and II vs. FIGO III and IV 1 | N0 vs. N1+N2 | Lack of vs. ‘Omental-Cake’ | Nodal Invasion > Omental Invasion vs. |
|---|---|---|---|---|
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
| ||||
|
|
1 FIGO, International Federation of Gynecology and Obstetrics system. 2 American Joint Committee on Cancer (AJCC) TNM staging system. Spread to nearby lymph nodes, also called para-aortic lymph nodes (N). 3 Refer to Table 2.
Figure 2Transcript levels of (a) peroxisome proliferator-activated receptor gamma co-activator 1α, (b) mitochondrial transcription factor A, (c) acetyl-CoA acyltransferase and (d) cytochrome c oxidase subunit 4 isoform 1 in ovarian control (n = 14) and cancer tissue (n = 27). Measurements were made in duplicate and arithmetic means were used for subsequent investigation. Results are expressed in arbitrary units with control set as 1 and presented as median (min to max) value. Differences statistically significant at *** p < 0.001.
Log2-fold changes in gene expression in ovarian cancer tissue obtained from overweight (n = 9) or obese patients (n = 10) compared to lean individuals (n = 8).
| Gene | Fold Change | |||
|---|---|---|---|---|
| Overweight | Obese | Overweight | Obese | |
|
| 0.9172 | −0.1781 | 0.252 | >0.999 |
|
| 0.6058 | 1.0061 | 0.329 |
|
|
| 0.0376 | 0.552 | >0.999 | >0.999 |
|
| 0.3567 | 0.8573 | 0.974 | 0.219 |
|
| 2.1578 | 0.7444 | 0.51 | 0.288 |
|
| −1.6832 | 0.3236 | 0.407 | >0.999 |
|
| 0.737 | 2.214 | 0.779 | 0.094 |
|
| −0.7112 | −0.3096 | 0.908 | >0.999 |
|
| 0.4707 | −0.245 | >0.999 | 0.622 |
|
| 1.131 | 0.1321 | 0.856 | >0.999 |
|
| −0.2871 | 0.6762 | 0.827 | 0.75 |
|
| −0.073 | 0.7698 | >0.999 | 0.208 |
|
| 1.1636 | 1.8047 | 0.089 |
|
|
| 0.6391 | 1.0391 | 0.955 | 0.984 |
|
| −0.575 | 0.2069 | 0.861 | 0.994 |
|
| 0.221 | 0.6918 | >0.999 | 0.532 |
|
| −0.2943 | 1.2679 | 0.948 |
|
|
| 0.5653 | 0.7144 | 0.888 | 0.201 |
Figure 3Heat map of correlations between the expression of energy substrate transporters and mitochondrial genes in (a) ovarian control and (b) cancer tissue. The relationships between the analyzed parameters were assayed via Spearman correlation coefficient. Correlations that were statistically significant (p < 0.05) are indicated with an asterisk.
Figure 4The transcription level of metabolism-related genes that significantly differed between ovarian cancer (n = 426) and control tissue (n = 88). Data are based on the TCGA cancer cohort and GTEx control samples. Data derive from The Gene Expression Profiling Interactive Analysis (GEPIA) database based on the TCGA-OC dataset and normal ovarian tissues (GTEx, Genotype-Tissue Expression project). Differences statistically significant at * p < 0.05.
Figure 5Kaplan–Meier curve analysis of (a) overall and (b) progression-free survival comparing high and low levels of the metabolism-associated genes.
Figure 6Violin plots representing significant correlations (p < 0.05) between gene expression and clinical stage based on the TCGA-OC dataset.
Primer sequences used for real-time PCR.
| Target Gene | Forward Primer (5′-3′) | Reverse Primer (5′-3′) | Amplicon Length [bp] |
|---|---|---|---|
|
| GGTACAGATGCAGCCTCATT | AGGCCTTGGATGGAGAACA | 157 |
|
| GCTAAGGCCCTGATCTTTGG | CCAAGTCTCCAGAGCAGAAC | 316 |
|
| TGGCGCTTCATCCGGGTCTT | CGAACGGTAGAGGCAAACAA | 140 |
|
| GAAGGCAAAGGTGCGACAGT | GCCGAACGGTAGAGGCAAA | 71 |
|
| GGGCCAGGAATTTGACGAAG | AACTCTCGTGGAAGTGACGC | 184 |
|
| CACCACCTCACTCCTGTTAC | CCACTTACTTCTGTCTCACTCC | 123 |
|
| GACCAACTAAGGCAAAGAG | CAATAGGATGCTTGTCTTCA | 183 |
|
| CACCGTACAGCAACTATACG | CAATGGTCGCCTCTTGTAGA | 115 |
|
| ATTGGCCTGGTGCTGCTGATG | CGAGTCTGCAGGAGGCTTGTG | 243 |
|
| CACAGAAAGCCTGAGCTTGA | CACCTGCATGAGCTTCTGA | 249 |
|
| AGCTGCTTATCCGCTTCTTCAA | AGCAGGCAGCACAGAATGTA | 175 |
|
| GCTTTGGTTAAAGAGCGGG | CTGAGGGTCACGAATCGGA | 151 |
|
| AGCCTCTTTGCCCAGATCTT | GGCAATCCGTCTTCATCCAC | 241 |
|
| AGCTCAGAACCCAGATGC | CCACTCCGCCCTATAAGC | 115 |
|
| CTTGCTCCGAGAGGGAGTC | AGCTCGTAGCTGGGAGGAAC | 148 |
|
| GGTCACGCCGATCCATATAAG | TCTGTGTGTGTACGAGCTCATGA | 79 |
|
| CTTCCGAGATTCCATCCTACGC | TGGCAGTCAGGCTCACAAACG | 131 |
|
| GAGATTTCTCTGTATGGCACC | CTGCAAATGAGACACTTTCTC | 276 |
|
| AGTCGGTTGGAGCGAGCATC | GGACTTCCTGTAACAACGCATCTC | 115 |
Figure 7Changes in the expression of genes related to metabolic pathways in primary ovarian cancer tissue. ↑: increase; ↓: decrease; ↔: unchanged.