Literature DB >> 36006872

Tbx18 Orchestrates Cytostructural Transdifferentiation of Cardiomyocytes to Pacemaker Cells by Recruiting the Epithelial-Mesenchymal Transition Program.

D Brian Foster1, Jin-Mo Gu2, Elizabeth H Kim3, David W Wolfson4, Robert O'Meally5, Robert N Cole5, Hee Cheol Cho6.   

Abstract

Previously, we reported that heterologous expression of an embryonic transcription factor, Tbx18, reprograms ventricular cardiomyocytes into induced pacemaker cells (Tbx18-iPMs), though the key pathways are unknown. Here, we have used a tandem mass tag proteomic approach to characterize the impact of Tbx18 on neonatal rat ventricular myocytes. Tbx18 expression triggered vast proteome remodeling. Tbx18-iPMs exhibited increased expression of known pacemaker ion channels, including Hcn4 and Cx45 as well as upregulation of the mechanosensitive ion channels Piezo1, Trpp2 (PKD2), and TrpM7. Metabolic pathways were broadly downregulated, as were ion channels associated with ventricular excitation-contraction coupling. Tbx18-iPMs also exhibited extensive intracellular cytoskeletal and extracellular matrix remodeling, including 96 differentially expressed proteins associated with the epithelial-to-mesenchymal transition (EMT). RNAseq extended coverage of low abundance transcription factors, revealing upregulation of EMT-inducing Snai1, Snai2, Twist1, Twist2, and Zeb2. Finally, network diffusion mapping of >200 transcriptional regulators indicates EMT and heart development factors occupy adjacent network neighborhoods downstream of Tbx18 but upstream of metabolic control factors. In conclusion, transdifferentiation of cardiac myocytes into pacemaker cells entails massive electrogenic, metabolic, and cytostructural remodeling. Structural changes exhibit hallmarks of the EMT. The results aid ongoing efforts to maximize the yield and phenotypic stability of engineered biological pacemakers.

Entities:  

Keywords:  cardiomyocytes; epithelial−mesenchymal transition; heart; network; pacemaker; proteomics; systems biology

Mesh:

Substances:

Year:  2022        PMID: 36006872      PMCID: PMC9552783          DOI: 10.1021/acs.jproteome.2c00133

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   5.370


  62 in total

1.  Linear models and empirical bayes methods for assessing differential expression in microarray experiments.

Authors:  Gordon K Smyth
Journal:  Stat Appl Genet Mol Biol       Date:  2004-02-12

2.  Direct conversion of quiescent cardiomyocytes to pacemaker cells by expression of Tbx18.

Authors:  Nidhi Kapoor; Wenbin Liang; Eduardo Marbán; Hee Cheol Cho
Journal:  Nat Biotechnol       Date:  2012-12-16       Impact factor: 54.908

3.  STAR: ultrafast universal RNA-seq aligner.

Authors:  Alexander Dobin; Carrie A Davis; Felix Schlesinger; Jorg Drenkow; Chris Zaleski; Sonali Jha; Philippe Batut; Mark Chaisson; Thomas R Gingeras
Journal:  Bioinformatics       Date:  2012-10-25       Impact factor: 6.937

4.  Piezo1 and Piezo2 are essential components of distinct mechanically activated cation channels.

Authors:  Bertrand Coste; Jayanti Mathur; Manuela Schmidt; Taryn J Earley; Sanjeev Ranade; Matt J Petrus; Adrienne E Dubin; Ardem Patapoutian
Journal:  Science       Date:  2010-09-02       Impact factor: 47.728

5.  Ectopic expression of Nkx2.5 suppresses the formation of the sinoatrial node in mice.

Authors:  Ramón A Espinoza-Lewis; Hongbing Liu; Cheng Sun; Chaohui Chen; Kai Jiao; YiPing Chen
Journal:  Dev Biol       Date:  2011-05-26       Impact factor: 3.582

Review 6.  Endothelial to Mesenchymal Transition in Cardiovascular Disease: JACC State-of-the-Art Review.

Authors:  Jason C Kovacic; Stefanie Dimmeler; Richard P Harvey; Toren Finkel; Elena Aikawa; Guido Krenning; Andrew H Baker
Journal:  J Am Coll Cardiol       Date:  2019-01-22       Impact factor: 24.094

7.  Functional redundancy between human SHOX and mouse Shox2 genes in the regulation of sinoatrial node formation and pacemaking function.

Authors:  Hongbing Liu; Chao-Hui Chen; Ramón A Espinoza-Lewis; Zhen Jiao; Ivana Sheu; Xuefeng Hu; Minkui Lin; Yanding Zhang; YiPing Chen
Journal:  J Biol Chem       Date:  2011-03-28       Impact factor: 5.157

Review 8.  Pacing the Heart with Genes: Recent Progress in Biological Pacing.

Authors:  Hee Cheol Cho
Journal:  Curr Cardiol Rep       Date:  2015-08       Impact factor: 2.931

9.  Molecular architecture of the human sinus node: insights into the function of the cardiac pacemaker.

Authors:  Natalie J Chandler; Ian D Greener; James O Tellez; Shin Inada; Hanny Musa; Peter Molenaar; Dario Difrancesco; Mirko Baruscotti; Renato Longhi; Robert H Anderson; Rudolf Billeter; Vinod Sharma; Daniel C Sigg; Mark R Boyett; Halina Dobrzynski
Journal:  Circulation       Date:  2009-03-16       Impact factor: 29.690

10.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

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