| Literature DB >> 36003399 |
Rosaria Maria Pipitone1, Vincenza Calvaruso1, Lorenza Di Marco2, Francesca Di Salvo3, Miriam Gaggianesi4, Giulia Lupo1, Rossella Zito1, Claudia La Mantia1, Matteo Ramazzotti5, Salvatore Petta1, Vito Di Marco1, Antonio Craxì1, Stefania Grimaudo1.
Abstract
MerTK is a tyrosine kinase receptor that belongs to the TAM (Tyro3/Axl/Mer) receptor family. It is involved in different processes including cellular proliferation/survival, cellular adhesion/migration, and release of the inflammatory/anti-inflammatory cytokines. Although it is reported that MERTK polymorphisms affect the severity of viral and metabolic liver diseases, being able to influence fibrosis progression and hepatocellular carcinoma development, the mechanisms remain unknown.Entities:
Keywords: Mer Tyrosine Kinase polymorphism (MERTK polymorphism); WNT gene family pathway (WNT pathway); hepatocellular carcinoma; liver fibrosis; matrix metallopeptidase
Mesh:
Substances:
Year: 2022 PMID: 36003399 PMCID: PMC9394453 DOI: 10.3389/fimmu.2022.926236
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 8.786
Demographic, clinical, laboratory, and histological characteristics of CHC patients according to rs4374383 MERTK genotype.
| GG (20 pts) | AA (19 pts) | P value | |
|---|---|---|---|
| Mean Age (years) | 67.5 | 54.6 | 0.012 |
| M/F | 15-May | 15-Apr | 0.77 |
| Esophageal varices | 4 () | 3 | 0.85 |
| Bioumoral data | |||
| • AST (U/l) | 90.7 | 48.2 | 0.08 |
| • ALT (U/l) | 114.4 | 57.4 | 0.07 |
| • Bilirubin (mg(dl) | 0.7 | 0.7 | 0.97 |
| • Albumin (g/dl) | 3.9 | 4 | 0.24 |
| • INR | 1.1 | 0.9 | 0.17 |
| • Hb (g/dl) | 14.4 | 14.8 | 0.66 |
| • WBC (mmc) | 6.38 | 6.505 | 0.84 |
| • PLT (mmc) | 184.941 | 155.437 | 0.16 |
| • Creatinine (mg/dl) | 0.7 | 0.8 | 0.93 |
| Virological features | |||
| viral load (mean) | 2.275.333 | 1.776.750 | 0.56 |
| HCV Genotypes | 0.23 | ||
| • 1a | 0 | 2 | |
| • 1b n. % | 17 (85) | 15 (79) | |
| • 2 | 1 | 1 | |
| • 3 | 0 | 1 | |
| • 4 | 0 | 0 | |
| HBV | 0 | 0 | |
| HIV | 0 | 0 | |
| Liver stiffness by TE (Fibroscan) | 14.9 | 10.1 | 0.04 |
List of 24 target genes of RT2 Profiler PCR Array (QIAGEN).
| 24 target genes | |
|---|---|
| 1. MERTK | |
| 2. PIK3CA | |
| 3. PIK3CB | |
| 4. PIK3CG | |
| 5. MAPK1 | |
| 6. MAP2K | |
| 7. GRB2 | |
| 8. STAT1 | |
| 9. STAT5A | |
| 10. STAT5B | |
| 11. STAT6 | |
| 12. BCL2 | |
| 13. BCL2L1 | |
| 14. BXL-XL | |
| 15. TLR4 | |
| 16. TLR9 | |
| 17. TRAF3 | |
| 18. TRAF6 | |
| 19. SOCS1 | |
| 20. SOCS3 | |
| 21. MYD88 | |
| 22. FAS | |
| 23. FASLG | |
| 24. AKTIP | |
Distribution of MERTK rs4374383 and rs6726639 SNPs in CHC patients selected for MERTK and downstream pathways panel.
| SNP rs4374383 A> G of MERTK | SNP rs6726639 A> C of MERTK |
|---|---|
| AA | AA |
| AA | AA |
| AA | AA |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| AA | AA |
| GG | CC |
| AA | AA |
| AA | AA |
| AA | AA |
| GG | CC |
| GG | CC |
| GG | CC |
| AA | AA |
| GG | CC |
| AA | AA |
| AA | AA |
| AA | AA |
| AA | AC |
| AA | AA |
| AA | AA |
| AA | AA |
| AA | AA |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CC |
| GG | CA |
List of 88 genes target of Prime PCR card of epithelial-mesenchymal transition, stemness and metastagenesis panel.
| 88 target genes | ||
|---|---|---|
| 1. AXIN1 | 31. ITGB1 | 61. SFRP4 |
| 2. AXIN2 | 32. JAG1 | 62. SMAD2 |
| 3. BMP1 | 33. KRT14 | 63. SMAD4 |
| 4. BMP2 | 34. KISS1 | 64. SNAI1 |
| 5. BMP7 | 35. KISS1R | 65. SNAI2 |
| 6. CCND1 | 36. MMP2 | 66. SNAI3 |
| 7. CD44 | 37. MMP3 | 67. SOX17 |
| 8. CDH1 | 38. MMP7 | 68. SRC |
| 9. CDH2 | 39. MMP9 | 69. STAT3 |
| 10. COL1A1 | 40. KREMEN1 | 70. TGFB1 |
| 11. CDKN2A | 41. KRT14 | 71. TGFB2 |
| 12. CTNNB1 | 42. LRP5 | 72. TGFB3 |
| 13. CXCL12 | 43. LRP6 | 73. TIMP1 |
| 14. CXCR4 | 44. MDM2 | 74. TIMP2 |
| 15. DKK1 | 45. MET | 75. TIMP3 |
| 16. EGFR | 46. MMP10 | 76. TIMP4 |
| 17. EPHB2 | 47. MMP11 | 77. TP53 |
| 18. ERBB2 | 48. MMP13 | 78. TWIST1 |
| 19. ERBB3 | 49. MYC | 79. TSHR |
| 20. ERBB4 | 50. NODAL | 80. VIM |
| 21. ESR1 | 51. NOTCH1 | 81. WNT11 |
| 22. FN1 | 52. OCLN | 82. WNT3A |
| 23. FZD7 | 53. PDGFRB | 83. WNT5A |
| 24. FGFR4 | 54. PTEN | 84. WNT5B |
| 25. FGFBP1 | 55. RAC1 | 85. WNT7A |
| 26. GSK3B | 56. RB1 | 86. WNT7B |
| 27. HGF | 57. RGS2 | 87. ZEB1 |
| 28. ILKAP | 58. RHOA | 88. ZEB2 |
| 29. ITGA5 | 59. SERPINE1 | |
| 30. ITGAV | 60. SFRP1 | |
Distribution of MERTK rs4374383 and rs6726639 SNPs in patients selected for epithelial-mesenchymal transition, stemness and metastagenesis panel.
| Patient CHC | SNP RS4374383 A>G of MERTK | SNP rs6726639 A>C of MERTK |
|---|---|---|
| CHC | AA | AA |
| CHC | GG | CC |
| HCC | AA | AA |
| CHC | AA | AA |
| CHC | AA | AA |
| CHC | AA | AA |
| CHC | GG | CC |
| CHC | GG | CC |
| HCC | AA | AA |
| HEALTHY | GG | CC |
| HEALTHY | GG | CC |
| HEALTHY | AA | AA |
Figure 1Differential gene expression in CHC patients with GG MERTK genotype (N = 19) and AA genotype (N = 16). P-VALUE: MERTK 0.01; GRB2 0.10; STAT1 0.36; STAT6 0.2; FAS 0.07; AKTIP 0.03.
Figure 2(A) HCC-AA vs CHC-AA and CHC-GG: statistically significant mean fold changes for MMP9 gene. PMMP9_§ç=0.045, PMMP9_§‡=0.04; (B) CHC-AA vs CHC-GG: statistically significant mean fold changes for MMP7 gene. PMMP7_ ç‡=0.01; (C) CHC-GG vs HCC-AA and vs CHC-AA: statistically significant mean fold changes for WNT11 gene. PWNT11_§‡=0.04; PWNT11_ç‡=0.03; (D) HCC-AA vs CHC-GG: statistically significant mean fold changes for SFRPI gene. PSFRPI §‡<0.01.