Literature DB >> 36002768

Constructing a cost-efficient, high-throughput and high-quality single-molecule localization microscope for super-resolution imaging.

John S H Danial1,2, Jeff Y L Lam3,4, Yunzhao Wu3,4, Matthew Woolley3, Eleni Dimou3,4, Matthew R Cheetham3,4, Derya Emin3,4, David Klenerman5,6.   

Abstract

Single-molecule localization microscopy (SMLM) leverages the power of modern optics to unleash ultra-precise structural nanoscopy of complex biological machines in their native environments as well as ultra-sensitive and high-throughput medical diagnostics with the sensitivity of a single molecule. To achieve this remarkable speed and resolution, SMLM setups are either built by research laboratories with strong expertise in optical engineering or commercially sold at a hefty price tag. The inaccessibility of SMLM to life scientists for technical or financial reasons is detrimental to the progress of biological and biomedical discoveries reliant on super-resolution imaging. In this work, we present the NanoPro, an economic, high-throughput, high-quality and easy-to-assemble SMLM for super-resolution imaging. We show that our instrument performs similarly to the most expensive, best-in-class commercial microscopes and rivals existing open-source microscopes at a lower price and construction complexity. To facilitate its wide adoption, we compiled a step-by-step protocol, accompanied by extensive illustrations, to aid inexperienced researchers in constructing the NanoPro as well as assessing its performance by imaging ground-truth samples as small as 20 nm. The detailed visual instructions make it possible for students with little expertise in microscopy engineering to construct, validate and use the NanoPro in <1 week, provided that all components are available.
© 2022. Springer Nature Limited.

Entities:  

Year:  2022        PMID: 36002768     DOI: 10.1038/s41596-022-00730-6

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   17.021


  39 in total

1.  Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM).

Authors:  Michael J Rust; Mark Bates; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2006-08-09       Impact factor: 28.547

2.  Imaging intracellular fluorescent proteins at nanometer resolution.

Authors:  Eric Betzig; George H Patterson; Rachid Sougrat; O Wolf Lindwasser; Scott Olenych; Juan S Bonifacino; Michael W Davidson; Jennifer Lippincott-Schwartz; Harald F Hess
Journal:  Science       Date:  2006-08-10       Impact factor: 47.728

3.  Three-dimensional super-resolution imaging by stochastic optical reconstruction microscopy.

Authors:  Bo Huang; Wenqin Wang; Mark Bates; Xiaowei Zhuang
Journal:  Science       Date:  2008-01-03       Impact factor: 47.728

4.  Subdiffraction-resolution fluorescence imaging with conventional fluorescent probes.

Authors:  Mike Heilemann; Sebastian van de Linde; Mark Schüttpelz; Robert Kasper; Britta Seefeldt; Anindita Mukherjee; Philip Tinnefeld; Markus Sauer
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

5.  Nuclear pore scaffold structure analyzed by super-resolution microscopy and particle averaging.

Authors:  Anna Szymborska; Alex de Marco; Nathalie Daigle; Volker C Cordes; John A G Briggs; Jan Ellenberg
Journal:  Science       Date:  2013-07-11       Impact factor: 47.728

6.  Superresolution imaging of amyloid fibrils with binding-activated probes.

Authors:  Jonas Ries; Vinod Udayar; Alice Soragni; Simone Hornemann; K Peter R Nilsson; Roland Riek; Christoph Hock; Helge Ewers; Adriano A Aguzzi; Lawrence Rajendran
Journal:  ACS Chem Neurosci       Date:  2013-04-22       Impact factor: 4.418

7.  Actin, spectrin, and associated proteins form a periodic cytoskeletal structure in axons.

Authors:  Ke Xu; Guisheng Zhong; Xiaowei Zhuang
Journal:  Science       Date:  2012-12-13       Impact factor: 47.728

8.  Bax assembly into rings and arcs in apoptotic mitochondria is linked to membrane pores.

Authors:  Raquel Salvador-Gallego; Markus Mund; Katia Cosentino; Jale Schneider; Joseph Unsay; Ulrich Schraermeyer; Johann Engelhardt; Jonas Ries; Ana J García-Sáez
Journal:  EMBO J       Date:  2016-01-18       Impact factor: 11.598

9.  Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT.

Authors:  Ralf Jungmann; Maier S Avendaño; Johannes B Woehrstein; Mingjie Dai; William M Shih; Peng Yin
Journal:  Nat Methods       Date:  2014-02-02       Impact factor: 28.547

10.  Systematic Nanoscale Analysis of Endocytosis Links Efficient Vesicle Formation to Patterned Actin Nucleation.

Authors:  Markus Mund; Johannes Albertus van der Beek; Joran Deschamps; Serge Dmitrieff; Philipp Hoess; Jooske Louise Monster; Andrea Picco; François Nédélec; Marko Kaksonen; Jonas Ries
Journal:  Cell       Date:  2018-07-26       Impact factor: 41.582

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