We report a new general method for trapping short-lived radicals, based on a homolytic substitution reaction SH2'. This departure from conventional radical trapping by addition or radical-radical cross-coupling results in high sensitivity, detailed structural information, and general applicability of the new approach. The radical traps in this method are terminal alkenes possessing a nitroxide leaving group (e.g., allyl-TEMPO derivatives). The trapping process thus yields stable products which can be stored and subsequently analyzed by mass spectrometry (MS) supported by well-established techniques such as isotope exchange, tandem MS, and high-performance liquid chromatography-MS. The new method was applied to a range of model radical reactions in both liquid and gas phases including a photoredox-catalyzed thiol-ene reaction and alkene ozonolysis. An unprecedented range of radical intermediates was observed in complex reaction mixtures, offering new mechanistic insights. Gas-phase radicals can be detected at concentrations relevant to atmospheric chemistry.
We report a new general method for trapping short-lived radicals, based on a homolytic substitution reaction SH2'. This departure from conventional radical trapping by addition or radical-radical cross-coupling results in high sensitivity, detailed structural information, and general applicability of the new approach. The radical traps in this method are terminal alkenes possessing a nitroxide leaving group (e.g., allyl-TEMPO derivatives). The trapping process thus yields stable products which can be stored and subsequently analyzed by mass spectrometry (MS) supported by well-established techniques such as isotope exchange, tandem MS, and high-performance liquid chromatography-MS. The new method was applied to a range of model radical reactions in both liquid and gas phases including a photoredox-catalyzed thiol-ene reaction and alkene ozonolysis. An unprecedented range of radical intermediates was observed in complex reaction mixtures, offering new mechanistic insights. Gas-phase radicals can be detected at concentrations relevant to atmospheric chemistry.
Short-lived radical intermediates play
a key role in many chemical
processes, including synthetic chemistry (e.g., polymerization[1] and photoredox catalysis[2]), biochemistry (e.g., oxidative stress[3]), and atmospheric chemistry (e.g., photochemical oxidation cycles[4] and
secondary organic aerosol formation[5]).
However, their detection is challenging due to their short lifetimes
and hence low concentrations in real systems, which are often below
the detection thresholds of conventional analytical techniques. In
addition, one may want to detect radicals in environments where deployment
of complex instrumentation can be difficult, for example, in atmospheric
field measurements.Electron paramagnetic resonance (EPR) spectroscopy
detects radicals
directly, but this can be very challenging for short-lived radicals,
and gaseous radicals can only usually be observed at reduced pressure.[6] In the gas phase, many radicals can also be directly
detected using mass spectrometry (MS) techniques (e.g., chemical ionization MS, CI-MS, or vacuum ultraviolet photoionization
MS, VUV-PIMS) or laser spectroscopy (e.g., laser-induced
fluorescence, LIF). VUV-PIMS, in particular, can detect any radical
and distinguish between isomers.[7] High
resolution and high sensitivity, required for analysis of complex
systems, can be achieved with synchrotron VUV-PIMS. Direct spectroscopic
radical detection, however, requires advanced instrumentation which
may not be suitable for all scenarios such as field or atmospheric
chamber work.More commonly used methods with a broad application
scope therefore
usually detect radicals indirectly, following their conversion (e.g., by trapping) to longer-lived species. For example,
liquid-phase •OH can be detected by UV–vis
or fluorescence spectroscopy after addition to aromatic scavengers.[8] In the gas phase, ROxLIF[9] and peroxy radical chemical amplification (PERCA)[10] are indirect techniques that predominantly measure total
RO2• following their chemical conversion
to other species.A popular method for trapping carbon-centered
radicals in the liquid
phase is via cross-coupling with persistent radicals
such as nitroxides (Figure A). The alkoxyamine adducts formed are then studied using
common characterization techniques, including MS.[11−15] This method is often applied to liquid-phase radicals,
for example, in homogeneous catalysis. MS characterization is highly
sensitive and provides structural information. However, nitroxide
trapping is rarely applicable to heteroatom-centered radicals, which
significantly limits its scope. In addition, the high reactivity of
nitroxides makes them non-innocent components of many reaction mixtures.
Figure 1
Radical
traps. (A) Cross-coupling trapping. (B) Spin trapping.
(C) Novel radical trap design and the SH2′ trapping
mechanism.
Radical
traps. (A) Cross-coupling trapping. (B) Spin trapping.
(C) Novel radical trap design and the SH2′ trapping
mechanism.Arguably the most common method of radical trapping,
applicable
to most short-lived radicals in both liquid and gas phases, is the
spin trapping technique. This typically relies on fast and selective
radical addition to the double bond in nitrone or nitroso traps, yielding
persistent nitroxide radicals that accumulate to concentrations detectable
by EPR spectroscopy (Figure B).[16] Spin trapping has been widely
used to study a variety of radical reactions using both EPR and MS
detection.[17−20] Unfortunately, this method has many well-documented drawbacks, including
false positives caused by side reactions, limited structural information
of the trapped radical, poor sensitivity, and often short lifetimes
of radical adducts ranging from seconds to hours.[21−24]Apart from addition and
cross-coupling, radicals can also be trapped via a
substitution reaction. For instance, •Cl was trapped
by aromatic ipso-substitution of a nitro group in
1,1-diphenyl-2-picrylhydrazyl (DPPH).[25] However, the yields of ipso-substitution are often poor, and many
radicals do not undergo this reaction,[26] significantly limiting the scope of this approach.Here, we
report a new class of radical traps, which overcome many
of the aforementioned drawbacks and enable facile detection of most
short-lived radicals. Radical trapping proceeds via a homolytic substitution reaction SH2′. The key
design feature is the presence of a good radical leaving group (a
nitroxide) at the allylic position of a terminal alkene. Reaction
of a short-lived radical with the trap releases the nitroxide radical
and yields a stable, non-radical product (Figure C). The thermodynamic driving force for this
reaction is the weakness of the C-ONR2 bond (typically
<170 kJ/mol).[27] Our design also incorporates
a functional “tuning” group “T” that can
be varied to optimize the chemical (e.g., rate of
radical addition) and physical (e.g., solubility,
MS ionization efficiency) properties of the traps. The concentration
of released nitroxides is low compared to cross-coupling trapping
(Figure A) as only
one equivalent is released per trapped radical.This paper aims
to demonstrate the broad scope of applications
of the new traps. The new method was used to trap radical intermediates
in a range of systems, from relatively simple liquid- and gas-phase
radical reactions to more complex processes such as terpene ozonolysis.
Results and Discussion
Synthesis of the New Traps
Two allyl-(2,2,6,6-tetramethylpiperidin-1-yl)oxyl
(TEMPO)-based traps containing alkyl (CHANT) or tertiary amine (DEADANT)
functional groups were prepared from commercially available starting
materials in three steps with acceptable yields (34–65% overall, Figure and Supporting Information Sections S1–S3,
S9.1). The conjugated amide group increased the reactivity of the
traps, particularly toward electron-rich radicals. DEADANT yielded
trapped products that could be ionized more efficiently, improving
MS sensitivity. The new traps (particularly CHANT) showed good chemical
stability in the presence of many non-radical reactive species (Supporting Information Section S4) and had a
shelf life of at least 3 months when stored neat at room temperature.
We note that no false positives (i.e., compounds
with the same structure as that of the trapped radicals but formed via a non-radical pathway) have been detected in reactions
reported herein, which constitutes a marked improvement over conventional
spin trapping.[21,23,24]
Figure 2
Synthetic
procedure for amide-functionalized traps. TEMPO = (2,2,6,6-tetramethylpiperidin-1-yl)oxyl.
(i) TEMPO, NaI, Na2SO3, MeCN, N2,
65 °C, 48 h. (ii) NaOH/1,4-dioxane, 24 h. (iii) H2NR, HBTU, DIPEA, DMF, 18 h.
Synthetic
procedure for amide-functionalized traps. TEMPO = (2,2,6,6-tetramethylpiperidin-1-yl)oxyl.
(i) TEMPO, NaI, Na2SO3, MeCN, N2,
65 °C, 48 h. (ii) NaOH/1,4-dioxane, 24 h. (iii) H2NR, HBTU, DIPEA, DMF, 18 h.In order to detect short-lived radical intermediates,
the new allyl-TEMPO-based
traps are added to the reaction of interest, similarly as for radical–radical
cross-coupling and spin trapping. The trapped radicals are then analyzed
by electrospray ionization (ESI) MS (Supporting Information Section S6). As most trapped radicals are bench-stable,
trapping can be performed without complex equipment (e.g., for field measurements), and the products can be analyzed at a
later date. This is an important advantage compared to conventional
spin trapping where most radical adducts have limited lifetime (typically
ranging from seconds to hours). Trapped radicals are detected as MS
peaks with the m/z value corresponding
to the mass of the radical plus that of the CHANT or DEADANT fragment
(166.1232 or 155.1184, respectively) plus H+ (1.0078) or
Na+ (22.9898).
Radical Detection with Allyl-TEMPO-Based Traps in Liquid-Phase
Reactions
The feasibility of the novel radical-trapping method
was first probed by applying it to a model radical reaction in the
liquid phase, a Ru-catalyzed photoinitiated (blue light-emitting diode,
LED) thiol–ene addition (Supporting Information Sections S5.1, S5.2).[28,29] This reaction proceeds
via a well-understood radical chain mechanism, with radical addition
and hydrogen atom abstraction propagation steps (Figure A).[30] CHANT was used as a radical trap due to its robustness. It also
does not absorb light in the blue LED spectral output range (Supporting Information Section S4.4).
Figure 3
Trapping intermediate
radicals in the photoinitiated thiol–ene
addition using CHANT. Bn = CH2Ph, Cy = cyclohexyl. (A)
Reaction mechanism and structures of trapped R1 and R2. (B) Background-corrected mass spectrum of the thiol–ene
trapping reaction, showing peaks corresponding to trapped radicals R1 and R2. Intensity is relative to the CHANT
standard (at the same concentration as that used in the reaction).
Trapping intermediate
radicals in the photoinitiated thiol–ene
addition using CHANT. Bn = CH2Ph, Cy = cyclohexyl. (A)
Reaction mechanism and structures of trapped R1 and R2. (B) Background-corrected mass spectrum of the thiol–ene
trapping reaction, showing peaks corresponding to trapped radicals R1 and R2. Intensity is relative to the CHANT
standard (at the same concentration as that used in the reaction).MS peaks corresponding to both trapped radical
intermediates R1 (BnS•) and R2 (BnSCH2CH•Ph) were observed in the
reaction mixtures
(Supporting Information Sections S8.1,
S8.2). Despite the large number of other products and non-radical
intermediates, these peaks were clearly visible in the mass spectrum
(Figure B). In conventional
spin trapping, EPR spectra only show signals for trapped radicals,
as all other compounds are usually EPR-silent, even in complex mixtures.
MS spectra, however, show peaks for all constituents. This complexity
is advantageous, as non-radical intermediates and products can be
detected simultaneously with the trapped radicals. We note that unambiguous
determination of elemental composition requires high-resolution MS
instruments (e.g., a standard time-of-flight mass
spectrometer with a 104 mass resolving power is sufficient
for most systems), which are widely available to most research laboratories.
Just like with any MS experiment, the elemental composition, supported
by the knowledge of the likely constituents of the reaction mixture,
makes it possible to assign the structures of the trapped radicals
with a high degree of certainty.Simultaneous detection of R1 and R2 made
it possible to compare their relative concentrations. We note that
concentrations of any short-lived radical intermediate depend on the
rate of their formation and the rate of their decay. The concentration
of the trapped species is additionally dependent on the rate of trapping
(and the rate of decay of the trapped radicals if they are unstable, e.g., in conventional spin trapping). This is true for any
trapping methodology. Fortunately, the rates of radical addition to
alkenes are well-studied, and the availability of kinetic data helps
relate MS peak intensities of trapped radicals to the concentrations
of the original radical intermediates.MS peaks corresponding
to trapped R1 had similar but
somewhat greater intensity compared to that of R2 (Figure B). However, the
rate of trapping of thiyl radical R1 by CHANT is estimated
to be at least 1000 times greater than that of carbon-centered R2.[31,32] Assuming a similar ionization
efficiency of the trapped R1 and R2 species,
this would suggest that R2 is the resting state for this
radical chain process, which is consistent with the literature rate
constants for related reactions (Supporting Information Section S8.2.2).A more accurate quantitative comparison of
MS peak intensities
could not be made as ionization efficiency may depend on the composition
of the analyte. We note that synthesis of an isotopically labeled
trap (e.g., by using perdeuterated cyclohexylamine
in the CHANT synthesis) and independent synthesis of labeled trapped
radicals (or their isolation from reaction mixtures) would allow for
accurate quantification using isotope dilution analysis.R2 was also trapped with the TEMPO radical released
during CHANT trapping (Figure A, Supporting Information Section
S8.2.1). This TEMPO-trapped R2 had much greater intensity
than the CHANT-trapped R2, likely due to the faster trapping
rate and better ionization efficiency of the alkoxyamine compound.
However, TEMPO trapping is limited to carbon-centered radicals: no
MS peak corresponding to TEMPO-trapped R1 was observed.
The ability of the new traps to simultaneously detect carbon- and
heteroatom-centered radicals such as R1 constitutes a
significant advantage over TEMPO trapping. Successful radical capture
with the new traps was further unambiguously confirmed by the isolation
of the pure product of PhS• trapping with CHANT
from a reaction mixture optimized for its formation from PhSH, in
a 63% yield (Supporting Information Sections
S5.2.2, S9.2.1).SH2′-based radical trapping
was next applied
to the Hofmann–Löffler–Freytag (HLF) reaction,
a cyclization of N-halogenated amines which is believed to proceed
by homolysis of the N-halogen bond (Figure A, Supporting Information Sections S5.3, S8.3, S9.2.2).[33,34] MS peaks corresponding
to trapped nitrogen- and/or carbon-centered radicals R3 and/or R4 were clearly visible in the mass spectrum
at m/z 295.2749 (Figure B). Although these two species
have identical molecular formulae, they could be distinguished using
D2O exchange experiments, as trapped R4 has
three exchangeable protons in the protonated ion (two on the ammonium
and one in the CHANT residue), whereas trapped R3 has
two. The shift of the m/z 295 peak
by 2 mass units upon D2O exchange was thus consistent with
the structure of the trapped R3 (Figure C). The peak corresponding to trapped R4 was not observed. However, tandem MS of the m/z 295 peak showed two low-intensity peaks that
could only be attributed to trapped R4 (Figure D). Most other (strong) tandem
MS peaks could be attributed to either species. We conclude that the
new traps enabled detection of not only the dominant R3 but also a small amount of R4. This is consistent with
the literature evidence that the 1,5-hydrogen atom transfer (1,5-HAT)
is rate-determining[35,36] and confirms trapping of the
nitrogen-centered radical R3.[37,38] In addition, observation of strong MS peaks of CHANT-trapped radicals
suggests that they are stable in mild acids and at high temperature
(95 °C).
Figure 4
Radical trapping in the HLF reaction using CHANT. (A)
Reaction
mechanism and structures of trapped R3 and R4. (B) Background-corrected mass spectrum of the HLF trapping reaction,
showing peaks corresponding to unreacted CHANT and trapped radicals R3/R4. Intensity is relative to the CHANT peak
before the reaction. (C) Background-corrected mass spectra of the
HLF trapping reaction in H2O and D2O, indicating
trapped R3. (D) Tandem mass spectrum of the m/z 295 peak (Figure B) showing two peaks which could only be attributed
to fragments of trapped R4. Intensity is relative to
the parent ion.
Radical trapping in the HLF reaction using CHANT. (A)
Reaction
mechanism and structures of trapped R3 and R4. (B) Background-corrected mass spectrum of the HLF trapping reaction,
showing peaks corresponding to unreacted CHANT and trapped radicals R3/R4. Intensity is relative to the CHANT peak
before the reaction. (C) Background-corrected mass spectra of the
HLF trapping reaction in H2O and D2O, indicating
trapped R3. (D) Tandem mass spectrum of the m/z 295 peak (Figure B) showing two peaks which could only be attributed
to fragments of trapped R4. Intensity is relative to
the parent ion.The above-mentioned results demonstrated the potential
of the new
method for the detection of radicals in relatively simple liquid-phase
reactions. We have also applied it to a range of other reactions including
aqueous •OH-initiated degradation of alcohols (Supporting Information Sections S5.9, S8.9),
nucleotides (Supporting Information Sections
S5.10, S8.10), saccharides (Supporting Information Sections S5.10, S8.11), and antioxidants (Supporting Information Sections S5.10, S8.12); synthetically useful Barton
(Supporting Information Sections S5.6,
S8.6) and Hunsdiecker reactions (Supporting Information Sections S5.7, S8.7); and decarboxylative iodination (Supporting Information Sections S5.8, S8.8).
In all reactions, which included complex mixtures, we detected a range
of radical intermediates. New mechanistic information was obtained.
For instance, the latter reaction (iodination of aromatic carboxylic
acids) was previously suggested to proceed via a
concerted decarboxylation/iodination of the intermediate hypoiodite.[39] However, the observation of a strong MS peak
for the trapped carboxylate radical (>4% intensity relative to
the
trap before initiation) points to the viability of an alternative
radical pathway (Supporting Information Section S8.8).
Radical Detection with Allyl-TEMPO-Based Traps in Complex Gas-Phase
Reactions
We next investigated gas-phase alkene ozonolysis,
which is relevant to atmospheric chemistry.[40] This reaction proceeds through the formation of an unstable ozonide
that fragments into a primary carbonyl and an excited Criegee intermediate.[41] The latter typically decomposes through several
steps to form a complex array of radical intermediates such as •OH, HO2•, peroxyl (RO2•), and alkoxyl (RO•)
radicals and a large number of oxidized products including highly
oxidized multifunctional (HOM) compounds.[5,42,43] A model cyclohexene ozonolysis system was
initially investigated (Figure A). O3 was generated by UV photolysis of O2 (Supporting Information Section
S5.4), followed by mixing with a gaseous alkene. The gas stream was
then allowed to react for a set residence time (typically 56.5 ms)
before being bubbled through a solution of CHANT. We estimate the
contact time of the gas bubbles with the trapping solution as ca. 4.5 ms. The bubbling continued for a set accumulation
time (typically 10 min). CHANT showed negligible reaction with ozone
under the reaction conditions (Supporting Information Section S8.4.1).
Figure 5
(A) Selected radical intermediates in cyclohexene ozonolysis.
(B)
Background-corrected mass spectrum of cyclohexene ozonolysis with
CHANT trapping, showing trapped R5 and R6. Intensity is relative to the CHANT peak before the reaction.
(A) Selected radical intermediates in cyclohexene ozonolysis.
(B)
Background-corrected mass spectrum of cyclohexene ozonolysis with
CHANT trapping, showing trapped R5 and R6. Intensity is relative to the CHANT peak before the reaction.In relatively simple reactions (e.g., synthetic
liquid-phase radical chemistry), the signals of trapped radicals could
be among the strongest peaks in the spectra (e.g., Figure S15). Ozonolysis reactions, on
the other hand, are much more complex, where MS spectra were heavily
dominated by a wide range of products and non-radical intermediates
(Figure B). Despite
the presence of a large number of other species, MS peaks corresponding
to trapped alkoxyl and peroxyl radicals R5, R6, and R7 were clearly visible in the mass spectrum of
the reaction mixture (Figure B and Supporting Information Section
S8.4.2). Encouraged by these results, we used CHANT to detect radical
intermediates formed during α-pinene ozonolysis (Supporting Information Sections S5.4, S8.4.3).
Atmospheric ozonolysis of this biogenic monoterpene is an important
non-photolytic contributor to the formation of •OH and other radicals and secondary organic aerosols (SOAs).[40,42,44,45] Owing to the complexity of this system, MS analysis involved automated
prediction of molecular formulae corresponding to observed m/z peaks. These molecular formulae were
then assigned to products and trapped radicals. Molecular formula
limits were set to only identify monomeric non-fragmented CHANT-trapped
radicals (Table ).
Using the molecular formulae thus obtained, radical structures for
all but 3 out of the 10 most intensely observed species were identified
(Figure A, Supporting Information Section S8.4.3.2).
Table 1
Identified Radicals from the Ten Most
Intense MS Peaks Attributed to Monomeric Non-Fragmented Trapped Radicals
from α-Pinene Ozonolysis CHANT Trapping (Figure A)a
route
observed m/z
relative intensity/%
corresponding
radical molecular formulab
example identified
structure
3
356.2198
0.097
C10H15O2•
R13
2
422.2153
0.070
C10H17O6•
R12
2
406.2196
0.063
C10H17O5•
R11
1
388.2097
0.035
C10H15O4•
R8
3
334.2378
0.024
C10H15O2•c
R13
1
372.2147
0.020
C10H15O3•
R9
1
404.2049
0.014
C10H15O5•
R10
Molecular formula limits were set
as C20H0–38N1O1–10Na0–1 and m/z limits as 100–500. Unreasonable molecular formulae were eliminated.
Intensity is quoted relative to the MS intensity of a trap standard.
Observed as a sodiated adduct
with
the CHANT residue unless stated otherwise.
Observed as a protonated adduct.
Figure 6
(A) Hypothesized
structures of detected radicals (predicted m/z values of sodiated CHANT adducts) in Table . (B) HPLC-MS chromatogram
and the mass spectrum (inset) of the m/z 366.228 peak corresponding to trapped R8 detected in
the α-pinene ozonolysis gas stream bubbled through CHANT solution.
The MS source was sent to waste between 13.5–14.0 min, to remove
unreacted CHANT. The mass spectrum of trapped R8 (observed
as a protonated ion as these gave the strongest peaks in HPLC-MS experiments)
is at time of the maximum intensity. Other structural isomers were
also predicted for these molecular formulae (Supporting Information Section S8.4.3.1).
(A) Hypothesized
structures of detected radicals (predicted m/z values of sodiated CHANT adducts) in Table . (B) HPLC-MS chromatogram
and the mass spectrum (inset) of the m/z 366.228 peak corresponding to trapped R8 detected in
the α-pinene ozonolysis gas stream bubbled through CHANT solution.
The MS source was sent to waste between 13.5–14.0 min, to remove
unreacted CHANT. The mass spectrum of trapped R8 (observed
as a protonated ion as these gave the strongest peaks in HPLC-MS experiments)
is at time of the maximum intensity. Other structural isomers were
also predicted for these molecular formulae (Supporting Information Section S8.4.3.1).Molecular formula limits were set
as C20H0–38N1O1–10Na0–1 and m/z limits as 100–500. Unreasonable molecular formulae were eliminated.
Intensity is quoted relative to the MS intensity of a trap standard.Observed as a sodiated adduct
with
the CHANT residue unless stated otherwise.Observed as a protonated adduct.Three molecular formulae were attributed to radicals
formed following
ozone addition across the α-pinene double bond (R8, R9, and R10, route 1).[46] Two molecular formulae were attributed to radicals formed
following •OH addition to the α-pinene double
bond (R11 and R12, route 2). β-Hydroxyperoxyl
radicals analogous to R7 were not observed, despite the
literature indicating that this pathway constitutes ∼45–70% •OH reactivity with α-pinene.[46,47] A final molecular formula was attributed to radicals formed following •OH-initiated H-atom abstraction (R13,
route 3). The literature indicated that this pathway constitutes ∼10% •OH reactivity with α-pinene, despite its corresponding
CHANT-trapped radical being observed with the greatest intensity.[46−48] The structural similarity of the trapped peroxyl radicals suggests
that they have similar ionization efficiencies. The trapping rates
of all peroxyl radicals are likely to be comparable, and their rates
of decay should be similar. Therefore, the relatively high intensity
of trapped R13 suggests that •OH-initiated
abstraction of an allylic H-atom may play a more significant role
in α-pinene ozonolysis than previously thought. The new traps
thus enabled simultaneous detection of many radical intermediates
and products in a very complex gaseous reaction mixture.Elemental
compositions obtained from high-resolution MS spectra
do not distinguish between isomers. A range of further MS techniques
are available to make structure assignment more certain, and they
were used here to validate the hypothesized structures of trapped
radicals (Figure A).
The ratio between monoisotopic MS peaks and their first 13C satellites was used to estimate the number of carbon atoms in species
corresponding to these peaks (Supporting Information Section S8.4.3.3). Fragmentation peaks observed using tandem MS
aided structure elucidation of parent MS peaks (Supporting Information Section S8.3.3). D2O exchange
studies were used to determine the number of labile protons associated
with each peak which made it possible to differentiate some structural
isomers. In particular, the structure of trapped R13 was
confirmed as a peroxyl radical rather than an isomeric ω-hydroxylated
alkoxyl radical which would have contained an extra labile proton
(Supporting Information Section S8.4.3.5).
High-performance liquid chromatography (HPLC)-MS was used to significantly
clean mass spectra, improve MS peak detection, and indicate the number
of species for each MS peak. In relatively simple liquid- and gas-phase
reactions, the number of HPLC peaks matches the number of expected
isomers (Supporting Information Figures
S30, S31, S36). In highly complex systems (e.g.,
α-pinene ozonolysis), the chromatograms could show several peaks
of isomers contributing to the same m/z. In these cases, the structure assignment is less certain, but it
could be strengthened by additional information. For example, the
chromatogram of the m/z 366.228
peak showed several peaks (Figure B). This m/z value
is consistent with the trapped R8 (as a protonated ion),
predicted to be a major intermediate in the Master Chemical Mechanism
(MCM).[46,49−51] The corresponding sodiated
ion (m/z 388.2097) observed with
direct-injection MS (without HPLC) is one of the strongest trapped
radical peaks in the spectrum (Table ), confirming the significant role of this radical
in the reaction.
Sensitivity of the New Method
Finally, we set out to
determine the minimum concentration of gaseous radicals which the
new traps could detect, in a model alkane oxidation system, n-nonane + •OH (Figure A). •OH was generated by
water photolysis and calibrated using laser-induced fluorescence (LIF)
detection at low pressure, known as fluorescence assay by gas expansion
(FAGE), as described by Onel et al.(52) (Supporting Information Sections
S5.5, S8.5). Since this system generated minimal ozone, DEADANT (which
is degraded by ozone but gives higher MS ionization efficiencies of
trapped radicals) was used as the trap. MCM modeling (Supporting Information Sections S8.5, S7.1, S10)
was employed to calculate gaseous [C9H19O2•] (R14) as 1.7 × 1011 molec cm–3 and [C9H19O•] (R15) as 2.1 × 103 molec cm–3. Unfortunately, MS peaks corresponding
to trapped R14 could not be detected after a 10 min accumulation
time. RO2• radicals such as R14 are trapped much slower than most other radical intermediates (e.g., they undergo addition to double bonds at least 108 times slower than RO• radicals like R15, Supporting Information Section
S7.2). Therefore, RO2• accumulated in
the trapping solution, and their reaction with the trap was outcompeted
by other reactions in the liquid phase, including self-reaction (Supporting Information Section S7.2). The sensitivity
of detection of trapped RO2• was further
reduced by their partial degradation in the HPLC column (Supporting Information Section S7.2). Reduction
of peroxides commonly used in sample preparation for MS analysis would
not have been helpful here as it would have made it impossible to
distinguish between trapped RO• and RO2•.
Figure 7
(A) Selected radical intermediates in •OH-initiated
autoxidation of n-nonane. (B) HPLC-MS chromatogram
of the peak corresponding to CHANT-trapped RO• (m/z 299.270, detected in •OH-initiated n-nonane degradation). The five distinct
peaks observed are believed to correspond to the five possible RO• structural isomers.
(A) Selected radical intermediates in •OH-initiated
autoxidation of n-nonane. (B) HPLC-MS chromatogram
of the peak corresponding to CHANT-trapped RO• (m/z 299.270, detected in •OH-initiated n-nonane degradation). The five distinct
peaks observed are believed to correspond to the five possible RO• structural isomers.One product of the RO2• (e.g., R14) self-reaction is the corresponding
RO• (e.g., R15). In
fact, modeling showed
that almost all R15 in the trapping solution was produced
by the R14 self-reaction rather than by absorption from
the gas phase (Supporting Information Section
S7.2). Trapped R15 can thus be used as a proxy for R14. The HPLC-MS chromatogram of the m/z 299.270 peak (matching trapped R15) showed
five distinct peaks (Figure B). As there are five possible R15 isomers and
no other reasonable compounds have the same elemental composition,
the HPLC-MS peaks were attributed to the five isomers of trapped R15. The new traps can thus be used to indirectly detect gaseous
RO2• radicals (via trapped
RO•) with the detection threshold estimated as ca. 1.5 × 109 molec cm–3 (Supporting Information Section S7.2)
which is comparable to the peak RO2• concentrations
observed in polluted urban environments. These results confirm the
high sensitivity of the radical-trapping method and highlight the
importance of (self-)reactions of less-reactive gaseous radicals,
such as RO2•, following their accumulation
in the trapping solution. We note that issues associated with the
slow rate of RO2• trapping are equally
important in other trapping methods including conventional spin trapping.
Conclusions
Although direct detection of free radical
intermediates has many
advantages, there are occasions when it is impractical. For instance,
radical concentrations in real systems are often too low for direct
EPR detection. Equipment availability and the requirement to sample
reaction mixtures directly into the instrument limit the scope of
MS-based techniques such as VUV-PIMS. In these cases, radical trapping
becomes a method of choice as it allows one to accumulate products
and provides temporal separation of sampling from analysis.We have developed a new class of radical traps (allyl-TEMPO derivatives),
which enable conversion of most short-lived radical intermediates
into stable products. Coupled with MS analysis, this radical trapping
approach combines the best features of the two most common alternatives:
spin trapping with EPR detection (applicability to most short-lived
radicals) and TEMPO cross-coupling with MS detection (high sensitivity,
detailed structural information).The new traps can be applied
to both gas- and liquid-phase reactions.
Simultaneous detection of trapped radicals, intermediates, and (by)products
in the same reaction mixture makes this method an excellent mechanistic
tool for studying radical reactions in highly complex systems. Just
like with any other trapping technique, kinetics of the trapping reaction
needs to be considered, and for some relatively longer-lived radicals
(e.g., RO2•), the trapping
reaction can be outcompeted by other reactions such as the self-reaction.
Nonetheless, the excellent sensitivity of MS makes the new method
suitable for trapping radical intermediates in a diverse range of
complex systems, including reactions relevant to atmospheric chemistry.An important feature of the allyl-TEMPO-based traps is that trapped
radicals are highly unlikely to be formed via non-radical
pathways, thus reducing the probability of artefacts. Although allyl-TEMPO-based
traps can undergo slow nucleophilic addition with strong nucleophiles,
the resulting adducts do not have the same structure as that of the
products of radical trapping and hence do not lead to false positives
commonly seen in conventional spin trapping.