| Literature DB >> 35996502 |
Mohammad Abbas1,2, Vandana Singh Kushwaha3, Kirti Srivastava4, Monisha Banerjee1.
Abstract
Background: Evidences suggest that single nucleotide polymorphisms (SNPs) can be considered as potential biomarkers for disease progression and therapeutic response in cervical cancer. The present study investigated the association of CYP1A1 T>C (rs4646903), CYP1A1 A>G (rs1048943), CYP2E1 T>A (rs6413432), RAD51 G>C (rs1801320), XRCC1 G>A (rs25487), XRCC2 G>A (rs3218536) and XRCC3 C>T (rs861539) polymorphisms with treatment outcome of cisplatin based chemoradiation (CRT).Entities:
Keywords: CYP1A1; CYP2E1; DNA repair gene; cervical cancer; polymorphisms; treatment outcome
Mesh:
Substances:
Year: 2022 PMID: 35996502 PMCID: PMC8915685 DOI: 10.3389/bjbs.2021.10120
Source DB: PubMed Journal: Br J Biomed Sci ISSN: 0967-4845 Impact factor: 2.432
Association of genotypes of CYP1A1 T>C rs4646903, CYP1A1 A>G rs1048943, CYP2E1 T>A rs6413432, RAD51 G>C rs1801320, XRCC1 G>A, rs25487 XRCC2 G>A rs3218536 and XRCC3 C>T rs861539 polymorphisms with vital status and recurrence of cervical cancer cases (n = 227).
| Genotypes | Vital Status | Recurrence | |||||
|---|---|---|---|---|---|---|---|
| Cases | Alive | Deceased |
| Disease Free | Never Disease Free/Recurred |
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| CYP1A1 T>C rs4646903 | |||||||
| TT | 76 (33.5) | 49 (31.4) | 27 (38.0) | .327 | 48 (30.0) | 28 (41.8) | .086 |
| TC/CC | 151 (66.5) | 107 (68.6) | 44 (62.0) | 112 (70.0) | 39 (58.2) | ||
| CYP1A1 A>G rs1048943 | |||||||
| AA | 124 (54.6) | 88 (56.4) | 36 (50.7) | .423 | 83 (51.9) | 41 (61.2) | .198 |
| AG/GG | 103 (45.4) | 68 (43.6) | 35 (49.3) | 77 (48.1) | 26 (38.8) | ||
| CYP2E1 T>A rs6413432 | |||||||
| TT | 184 (81.1) | 125 (80.1) | 59 (83.1) | .596 | 133 (83.1) | 51 (76.1) | .219 |
| TA/AA | 43 (18.9) | 31 (19.9) | 12 (16.9) | 27 (16.9) | 16 (23.8) | ||
| RAD51 G>C rs1801320 | |||||||
| GG | 133 (58.6) | 82 (52.6) | 51 (71.8) | .006 | 88 (55.0) | 45 (67.2) | .09 |
| GC/CC | 94 (41.4) | 74 (47.4) | 20 (28.2) | 72 (45.0) | 22 (32.8) | ||
| XRCC1 G>A rs25487 | |||||||
| GG | 97 (42.7) | 56 (35.9) | 41 (57.7) | .002 | 65 (40.6) | 32 (47.8) | .322 |
| GA/AA | 130 (57.3) | 100 (64.1) | 30 (42.3) | 95 (59.4) | 35 (52.2) | ||
| XRCC2 G>A rs3218536 | |||||||
| GG | 179 (78.9) | 124 (79.5) | 55 (77.5) | .729 | 126 (78.8) | 53 (79.1) | .952 |
| GA/AA | 48 (21.1) | 32 (20.5) | 16 (22.5) | 34 (21.2) | 14 (20.9) | ||
| XRCC3 C>T rs861539 | |||||||
| CC | 135 (59.5) | 95 (60.9) | 40 (56.3) | .517 | 89 (55.6) | 46 (68.7) | .068 |
| CT/TT | 92 (40.5) | 61 (39.1) | 31 (43.7) | 71 (44.4) | 21(31.3) | ||
Significant association (p < .05).
Association of genotypes of CYP1A1 T>C rs4646903, CYP1A1 A>G rs1048943, CYP2E1 T>A rs6413432, RAD51 G>C rs1801320, XRCC1 G>A, rs25487 XRCC2 G>A rs3218536 and XRCC3 C>T rs861539 polymorphisms with clinical response of cervical cancer cases (n = 227).
| Genotypes | Clinical Response | OR (95% CI) |
| ||
|---|---|---|---|---|---|
| N | CR+PR, (%) | SD+PD, (%) | |||
| 227 | 194 (85.5) | 33 (14.5) | |||
| CYP1A1 rs4646903T>C | |||||
| TT | 76 | 68 (35.1) | 8 (24.2) | 1.0 (Ref) | |
| TC | 113 | 93 (47.9) | 20 (60.6) | 0.182 (0.760–4.396) | .178 |
| CC | 38 | 33 (17.0) | 5 (15.2) | 1.30 (0.391–4.243) | .677 |
| TC/CC | 151 | 126 (64.9) | 25 (75.8) | 1.70 (0.722–3.942) | .228 |
| CYP1A1 rs1048943A>G | |||||
| AA | 124 | 105 (54.1) | 19 (57.6) | 1.0 (Ref) | |
| AG | 97 | 83 (42.8) | 14 (42.4) | 0.93 (0.441–1.969) | .854 |
| GG | 6 | 6 (3.1) | 0 (0.0) | 0 | 0 |
| AG/GG | 103 | 89 (45.9) | 14 (42.4) | 0.90 (0.412–1.833) | .713 |
| CYP2E1 rs6413432T>A | |||||
| TT | 184 | 163 (84.0) | 21 (63.6) | 1.0 (Ref) | |
| TA | 38 | 26 (13.4) | 12 (36.4) | 3.58 (1.576–8.144) | .002 |
| AA | 5 | 5 (2.6) | 0 | 0 | 0 |
| TA/AA | 43 | 31 (16.0) | 12 (36.4) | 3.00 (1.341–6.731) | .008 |
| RAD51 rs1801320G>C | |||||
| GG | 133 | 107 (55.1) | 26 (78.8) | 1.0 (Ref) | |
| GC | 81 | 76 (39.2) | 5 (15.2) | 0.27 (0.099–0.737) | .011 |
| CC | 13 | 11 (5.7) | 2 (6.1) | 0.75 (0.156–3.584) | .717 |
| GC/CC | 94 | 87 (44.8) | 7 (21.2) | 0.33 (0.137–0.799) | .014 |
| XRCC1 rs25487G>A | |||||
| GG | 97 | 80 (42.2) | 17 (51.5) | 1.0 (Ref) | |
| GA | 98 | 85 (43.8) | 13 (39.4) | 0.72 (0.329–1.576) | .411 |
| AA | 32 | 29 (14.9) | 3 (9.1) | 0.49 (0.133–1.784) | .277 |
| GA/AA | 130 | 114 (58.8) | 16 (48.5) | 0.66 (0.315–1.384) | .272 |
| XRCC2 rs3218536G>A | |||||
| GG | 179 | 153 (78.9) | 26 (78.8) | 1.0 (Ref) | |
| GA | 46 | 40 (20.6) | 6 (18.2) | 0.90 (0.340–2.290) | .798 |
| AA | 2 | 1 (0.5) | 1 (3.0) | 5.90 (0.357–97.043) | .215 |
| GA+AA | 48 | 41 (21.1) | 7 (21.2) | 1.01 (0.407–2.478) | .992 |
| XRCC3 rs861539C>T | |||||
| CC | 135 | 113 (58.2) | 22 (66.7) | 1.0 (Ref) | |
| CT | 78 | 68 (35.1) | 10 (30.3) | 0.76 (0.337–1.691) | .495 |
| TT | 14 | 13 (6.7) | 1 (3.0) | 0.40 (0.049–3.177) | .383 |
| CT/TT | 92 | 81 (41.8) | 11 (33.3) | 0.70 (0.320–1.519) | .364 |
CI, confidence interval; OR, odds ratio; significant association (p < 0.05); CR, complete response; PR, partial response; SD, stable disease; PD, progressive disease; CR+PR, Responders; SD+PD, Non-responder; 1.0 (Reference).
Association of genotypes of CYP1A1 T>C rs4646903, CYP1A1 A>G rs1048943, CYP2E1 T>A rs6413432, RAD51 G>C rs1801320, XRCC1 G>A rs25487, XRCC2 G>A rs3218536 and XRCC3 C>T rs861539 polymorphisms and survival after treatment (CRT) for cervical cancer.
| Genotypes | Alive cases, (%) | Death cases, (%) | HR |
|
|---|---|---|---|---|
| 156 | 71 | |||
| CYP1A1 rs4646903T>C | ||||
| TT | 49 (31.4) | 27 (38.0) | 1.0 (Ref) | .196 |
| TC/CC | 107 (68.6) | 44 (62.0) | 0.724 (0.443–1.82) | |
| CYP1A1 rs1048943A>G | ||||
| AA | 88 (56.4) | 36 (50.7) | 1.0 (Ref.) | .463 |
| AG/GG | 68 (43.6) | 35 (49.3) | 1.295 (0.743–1.921) | |
| CYP2E1 rs6413432T>A | ||||
| TT | 125 (80.1) | 59 (83.1) | 1.0 (Ref.) | .54 |
| TA/AA | 31 (19.9) | 12 (16.9) | 0.823 (0.441–1.536) | |
| RAD51 rs1801320G>C | ||||
| GG | 82 (52.6) | 51 (71.8) | 1.0 (Ref) | .008 |
| GC/CC | 74 (47.4) | 20 (28.2) | 0.489 (0.287–0.832) | |
| XRCC1 rs25487G>A | ||||
| GG | 56 (35.9) | 41 (57.7) | 1.0 (Ref.) | .003 |
| GA/AA | 100 (64.1) | 30 (42.3) | 0.484 (0.302–0.775) | |
| XRCC2 rs3218536G>A | ||||
| GG | 124 (79.5) | 55 (77.5) | 1.0 (Ref.) | .465 |
| GA/AA | 32 (20.5) | 16 (22.5) | 1.233 (0.703–2.165) | |
| XRCC3 rs861539C>T | ||||
| CC | 95 (60.9) | 40 (56.3) | 1.0 (Ref.) | .332 |
| CT/TT | 61 (39.1) | 31 (43.7) | 1.265 (0.787–2.032) | |
CI, Confidence interval; HR, Hazard ratio; Significant association (p < .05); 1.0 (Reference).
Adjusted for age, stage and histopathology.
FIGURE 1Kaplan-Meier function for overall survival after chemoradiotherapy treatment among cervical cancer patients with (A) RAD51 G>C rs1801320, GG vs. GC/CC (n = 133 vs. 94) and (B) XRCC1 G>A rs25487, GG vs. GA/AA (n = 97 vs. 130) genotypes. Test for survival difference by log- rank methods.