Literature DB >> 35985342

A druggable addiction to de novo pyrimidine biosynthesis in diffuse midline glioma.

Sharmistha Pal1, Jakub P Kaplan1, Huy Nguyen1, Sylwia A Stopka2, Milan R Savani3, Michael S Regan4, Quang-De Nguyen5, Kristen L Jones5, Lisa A Moreau6, Jingyu Peng7, Marina G Dipiazza4, Andrew J Perciaccante4, Xiaoting Zhu8, Bradley R Hunsel1, Kevin X Liu9, Sanda Alexandrescu10, Rachid Drissi8, Mariella G Filbin11, Samuel K McBrayer12, Nathalie Y R Agar13, Dipanjan Chowdhury14, Daphne A Haas-Kogan15.   

Abstract

Diffuse midline glioma (DMG) is a uniformly fatal pediatric cancer driven by oncohistones that do not readily lend themselves to drug development. To identify druggable targets for DMG, we conducted a genome-wide CRISPR screen that reveals a DMG selective dependency on the de novo pathway for pyrimidine biosynthesis. This metabolic vulnerability reflects an elevated rate of uridine/uracil degradation that depletes DMG cells of substrates for the alternate salvage pyrimidine biosynthesis pathway. A clinical stage inhibitor of DHODH (rate-limiting enzyme in the de novo pathway) diminishes uridine-5'-phosphate (UMP) pools, generates DNA damage, and induces apoptosis through suppression of replication forks-an "on-target" effect, as shown by uridine rescue. Matrix-assisted laser desorption/ionization (MALDI) mass spectroscopy imaging demonstrates that this DHODH inhibitor (BAY2402234) accumulates in the brain at therapeutically relevant concentrations, suppresses de novo pyrimidine biosynthesis in vivo, and prolongs survival of mice bearing intracranial DMG xenografts, highlighting BAY2402234 as a promising therapy against DMGs.
Copyright © 2022 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ATR; BAY2402234; DHODH; DPYD; de novo pyrimidine synthesis; diffuse intrinsic pontine glioma; diffuse midline glioma; elimusertib; pyrimidine degradation; replication stress

Mesh:

Substances:

Year:  2022        PMID: 35985342      PMCID: PMC9575661          DOI: 10.1016/j.ccell.2022.07.012

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   38.585


  53 in total

1.  Improved design and analysis of CRISPR knockout screens.

Authors:  Chen-Hao Chen; Tengfei Xiao; Han Xu; Peng Jiang; Clifford A Meyer; Wei Li; Myles Brown; X Shirley Liu
Journal:  Bioinformatics       Date:  2018-12-01       Impact factor: 6.937

2.  Histone H3 wild-type DIPG/DMG overexpressing EZHIP extend the spectrum diffuse midline gliomas with PRC2 inhibition beyond H3-K27M mutation.

Authors:  David Castel; Thomas Kergrohen; Arnault Tauziède-Espariat; Alan Mackay; Samia Ghermaoui; Emmanuèle Lechapt; Stefan M Pfister; Christof M Kramm; Nathalie Boddaert; Thomas Blauwblomme; Stéphanie Puget; Kévin Beccaria; Chris Jones; David T W Jones; Pascale Varlet; Jacques Grill; Marie-Anne Debily
Journal:  Acta Neuropathol       Date:  2020-03-19       Impact factor: 17.088

Review 3.  The essential kinase ATR: ensuring faithful duplication of a challenging genome.

Authors:  Joshua C Saldivar; David Cortez; Karlene A Cimprich
Journal:  Nat Rev Mol Cell Biol       Date:  2017-08-16       Impact factor: 94.444

4.  Dysregulation of de novo nucleotide biosynthetic pathway enzymes in cancer and targeting opportunities.

Authors:  Alyncia D Robinson; Marie-Lisa Eich; Sooryanarayana Varambally
Journal:  Cancer Lett       Date:  2019-11-13       Impact factor: 8.679

5.  A positive/negative ion-switching, targeted mass spectrometry-based metabolomics platform for bodily fluids, cells, and fresh and fixed tissue.

Authors:  Min Yuan; Susanne B Breitkopf; Xuemei Yang; John M Asara
Journal:  Nat Protoc       Date:  2012-04-12       Impact factor: 13.491

6.  Dihydropyrimidine accumulation is required for the epithelial-mesenchymal transition.

Authors:  Yoav D Shaul; Elizaveta Freinkman; William C Comb; Jason R Cantor; Wai Leong Tam; Prathapan Thiru; Dohoon Kim; Naama Kanarek; Michael E Pacold; Walter W Chen; Brian Bierie; Richard Possemato; Ferenc Reinhardt; Robert A Weinberg; Michael B Yaffe; David M Sabatini
Journal:  Cell       Date:  2014-08-28       Impact factor: 41.582

7.  Integrated Metabolic and Epigenomic Reprograming by H3K27M Mutations in Diffuse Intrinsic Pontine Gliomas.

Authors:  Chan Chung; Stefan R Sweha; Drew Pratt; Benita Tamrazi; Pooja Panwalkar; Adam Banda; Jill Bayliss; Debra Hawes; Fusheng Yang; Ho-Joon Lee; Mengrou Shan; Marcin Cieslik; Tingting Qin; Christian K Werner; Daniel R Wahl; Costas A Lyssiotis; Zhiguo Bian; J Brad Shotwell; Viveka Nand Yadav; Carl Koschmann; Arul M Chinnaiyan; Stefan Blüml; Alexander R Judkins; Sriram Venneti
Journal:  Cancer Cell       Date:  2020-08-13       Impact factor: 31.743

8.  Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas.

Authors:  Gang Wu; Alberto Broniscer; Troy A McEachron; Charles Lu; Barbara S Paugh; Jared Becksfort; Chunxu Qu; Li Ding; Robert Huether; Matthew Parker; Junyuan Zhang; Amar Gajjar; Michael A Dyer; Charles G Mullighan; Richard J Gilbertson; Elaine R Mardis; Richard K Wilson; James R Downing; David W Ellison; Jinghui Zhang; Suzanne J Baker
Journal:  Nat Genet       Date:  2012-01-29       Impact factor: 38.330

9.  Metabolic heterogeneity confers differences in melanoma metastatic potential.

Authors:  Alpaslan Tasdogan; Brandon Faubert; Vijayashree Ramesh; Jessalyn M Ubellacker; Bo Shen; Ashley Solmonson; Malea M Murphy; Zhimin Gu; Wen Gu; Misty Martin; Stacy Y Kasitinon; Travis Vandergriff; Thomas P Mathews; Zhiyu Zhao; Dirk Schadendorf; Ralph J DeBerardinis; Sean J Morrison
Journal:  Nature       Date:  2019-12-18       Impact factor: 49.962

10.  Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma.

Authors:  Alan Mackay; Anna Burford; Diana Carvalho; Elisa Izquierdo; Janat Fazal-Salom; Kathryn R Taylor; Lynn Bjerke; Matthew Clarke; Mara Vinci; Meera Nandhabalan; Sara Temelso; Sergey Popov; Valeria Molinari; Pichai Raman; Angela J Waanders; Harry J Han; Saumya Gupta; Lynley Marshall; Stergios Zacharoulis; Sucheta Vaidya; Henry C Mandeville; Leslie R Bridges; Andrew J Martin; Safa Al-Sarraj; Christopher Chandler; Ho-Keung Ng; Xingang Li; Kun Mu; Saoussen Trabelsi; Dorra H'mida-Ben Brahim; Alexei N Kisljakov; Dmitry M Konovalov; Andrew S Moore; Angel Montero Carcaboso; Mariona Sunol; Carmen de Torres; Ofelia Cruz; Jaume Mora; Ludmila I Shats; João N Stavale; Lucas T Bidinotto; Rui M Reis; Natacha Entz-Werle; Michael Farrell; Jane Cryan; Darach Crimmins; John Caird; Jane Pears; Michelle Monje; Marie-Anne Debily; David Castel; Jacques Grill; Cynthia Hawkins; Hamid Nikbakht; Nada Jabado; Suzanne J Baker; Stefan M Pfister; David T W Jones; Maryam Fouladi; André O von Bueren; Michael Baudis; Adam Resnick; Chris Jones
Journal:  Cancer Cell       Date:  2017-09-28       Impact factor: 31.743

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  1 in total

1.  Gliomas lean on pyrimidines.

Authors:  Joseph Willson
Journal:  Nat Rev Cancer       Date:  2022-09-21       Impact factor: 69.800

  1 in total

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