| Literature DB >> 35982960 |
Yi Li1, Wenjing Wu2, Yuchen Sun1, Dequan Yu3, Yuemei Zhang1, Long Wang1, Yao Wang1, Xiaozhi Zhang1, Yongkai Lu1.
Abstract
Purpose: Our purpose was to investigate the influence of atlas library size and CT cross-slice number on the accuracy and efficiency of the atlas-based auto-segmentation (ABAS) method for the automatic contouring of clinical treatment volume (CTV) and organs at risk (OARs) during cervical cancer radiotherapy.Entities:
Keywords: atlas; auto-segmentation; automatic contouring; cervical cancer; radiotherapy
Year: 2022 PMID: 35982960 PMCID: PMC9379286 DOI: 10.3389/fonc.2022.945053
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Characteristics of atlas library and tested patients.
| TestN = 20 | Size of atlas library | ||||||
|---|---|---|---|---|---|---|---|
| N = 20 | N = 40 | N = 60 | N = 80 | N = 100 | N = 120 | ||
| Mean age (SD) | 50.8 (11.3) | 52.1 (12.5) | 53.4 (12.2) | 53.8 (11.7) | 52.8 (12.3) | 51.8 (11.9) | 54.8 (12.6) |
| Mean height (SD), cm | 157.0 (7.4) | 158.0 (6.9) | 159.7 (6.4) | 157.4 (7.6) | 158.4 (6.9) | 157.4 (7.8) | 159.4 (7.5) |
| Mean weight (SD), kg | 62.7 (8.5) | 62.5 (7.1) | 61.3 (6.8) | 61.7 (7.5) | 62.9 (7.6) | 61.6 (8.3) | 62.7 (7.3) |
| Mean BMI (SD), kg/m2 | 25.4 (4.5) | 25.0 (4.3) | 24.0 (3.9) | 24.9 (4.1) | 25.1 (3.8) | 24.9 (4.2) | 24.7 (4.4) |
Figure 1Variance between manual contours and ABAS automatic contours in CTV and OARs of cervical cancer patients with an atlas library size of 20 (A1, B1, C1: CTV contour comparison, A2, B2, C2: bladder contour comparison, A3, B3, C3: rectum contour comparison, A4, B4, C4: spinal cord comparison, A5, B5, C5: femoral head-L contour comparison, A6, B6, C6: femoral head-R contour comparison. Manual contours in red color, and automatic contours in green color).
DSC and HD value of CTV and OARs with an atlas library size of 20.
| Structure | DSC | HD (cm) |
|---|---|---|
| CTV | 0.816 ± 0.046 | 2.195 ± 0.340 |
| Bladder | 0.866 ± 0.035 | 1.591 ± 0.340 |
| Rectum | 0.685 ± 0.048 | 2.508 ± 0.559 |
| Femoral head-L | 0.867 ± 0.039 | 0.843 ± 0.369 |
| Femoral head-R | 0.873 ± 0.047 | 0.789 ± 0.260 |
| Spinal cord | 0.858 ± 0.052 | 0.604 ± 0.205 |
The DSC value of CTV and OARs in different atlas library groups (mean ± SD).
| 20 | 40 | 60 | 80 | 100 | 120 | |
|---|---|---|---|---|---|---|
| CTV | 0.816 ± 0.046 | 0.818 ± 0.046 | 0.819 ± 0.049 | 0.814 ± 0.036 | 0.819 ± 0.061 | 0.810 ± 0.046 |
| Bladder | 0.866 ± 0.035 | 0.857 ± 0.043 | 0.860 ± 0.034 | 0.854 ± 0.047 | 0.855 ± 0.043 | 0.861 ± 0.046 |
| Rectum | 0.685 ± 0.048 | 0.682 ± 0.041 | 0.693 ± 0.042 | 0.689 ± 0.048 | 0.682 ± 0.048 | 0.692 ± 0.053 |
| Femoral head-L | 0.867 ± 0.039 | 0.868 ± 0.047 | 0.865 ± 0.037 | 0.875 ± 0.046 | 0.864 ± 0.046 | 0.870 ± 0.038 |
| Femoral head-R | 0.873 ± 0.047 | 0.865 ± 0.041 | 0.870 ± 0.045 | 0.867 ± 0.042 | 0.869 ± 0.046 | 0.879 ± 0.037 |
| Spinal cord | 0.858 ± 0.052 | 0.857 ± 0.058 | 0.856 ± 0.053 | 0.851 ± 0.038 | 0.859 ± 0.037 | 0.858 ± 0.051 |
The HD value of CTV and OARs in different atlas library groups (mean ± SD, cm).
| 20 | 40 | 60 | 80 | 100 | 120 | |
|---|---|---|---|---|---|---|
| CTV | 2.195 ± 0.340 | 2.335 ± 0.223 | 2.310 ± 0.265 | 2.345 ± 0.255 | 2.363 ± 0.275 | 2.074 ± 0.308 |
| Bladder | 1.591 ± 0.340 | 1.612 ± 0.257 | 1.566 ± 0.332 | 1.571 ± 0.293 | 1.614 ± 0.272 | 1.559 ± 0.298 |
| Rectum | 2.045 ± 0.562 | 2.097 ± 0.554 | 1.967 ± 0.381 | 1.956 ± 0.401 | 2.039 ± 0.429 | 1.925 ± 0.449 |
| Femoral head-L | 0.843 ± 0.369 | 0.727 ± 0.230 | 0.774 ± 0.204 | 0.690 ± 0.217 | 0.725 ± 0.297 | 0.730 ± 0.228 |
| Femoral head-R | 0.789 ± 0.260 | 0.730 ± 0.235 | 0.700 ± 0.140 | 0.635 ± 0.185 | 0.698 ± 0.195 | 0.673 ± 0.167 |
| Spinal cord | 0.604 ± 0.205 | 0.767 ± 0.336 | 0.640 ± 0.225 | 0.626 ± 0.267 | 0.677 ± 0.213 | 0.636 ± 0.161 |
Results of post-hoc least significant difference (LSD) with DSC value among different atlas library groups.
| Atlasgroup | Atlasgroup | CTV | Bladder | Rectum | Femoral head-L | Femoral head-R | Spinal cord |
|---|---|---|---|---|---|---|---|
| 20 | 40 | 0.753 | 0.694 | 0.291 | 0.592 | 0.610 | 0.240 |
| 60 | 0.519 | 0.094 | 0.490 | 0.237 | 0.492 | 0.191 | |
| 80 | 0.954 | 0.372 | 0.268 | 0.883 | 0.877 | 0.062 | |
| 100 | 0.508 | 0.260 | 0.644 | 0.320 | 0.705 | 0.199 | |
| 120 | 0.745 | 0.886 | 0.104 | 0.592 | 0.722 | 0.163 | |
| 40 | 20 | 0.753 | 0.694 | 0.291 | 0.592 | 0.610 | 0.240 |
| 60 | 0.740 | 0.040 | 0.712 | 0.514 | 0.859 | 0.892 | |
| 80 | 0.797 | 0.200 | 0.958 | 0.697 | 0.722 | 0.477 | |
| 100 | 0.727 | 0.131 | 0.551 | 0.644 | 0.895 | 0.910 | |
| 120 | 0.991 | 0.591 | 0.558 | 1.000 | 0.877 | 0.820 | |
| 60 | 20 | 0.519 | 0.094 | 0.490 | 0.237 | 0.492 | 0.191 |
| 40 | 0.740 | 0.040 | 0.712 | 0.514 | 0.859 | 0.892 | |
| 80 | 0.556 | 0.425 | 0.673 | 0.299 | 0.594 | 0.565 | |
| 100 | 0.986 | 0.573 | 0.819 | 0.848 | 0.757 | 0.982 | |
| 120 | 0.749 | 0.124 | 0.342 | 0.514 | 0.740 | 0.928 | |
| 80 | 40 | 0.954 | 0.372 | 0.268 | 0.883 | 0.877 | 0.062 |
| 60 | 0.797 | 0.200 | 0.958 | 0.697 | 0.722 | 0.477 | |
| 80 | 0.556 | 0.425 | 0.673 | 0.299 | 0.594 | 0.565 | |
| 100 | 0.545 | 0.813 | 0.516 | 0.395 | 0.823 | 0.550 | |
| 120 | 0.788 | 0.453 | 0.594 | 0.697 | 0.841 | 0.628 | |
| 100 | 20 | 0.508 | 0.260 | 0.644 | 0.320 | 0.705 | 0.199 |
| 40 | 0.727 | 0.131 | 0.551 | 0.644 | 0.895 | 0.910 | |
| 60 | 0.986 | 0.573 | 0.819 | 0.848 | 0.757 | 0.982 | |
| 80 | 0.545 | 0.813 | 0.516 | 0.395 | 0.823 | 0.550 | |
| 120 | 0.736 | 0.325 | 0.240 | 0.644 | 0.981 | 0.910 | |
| 120 | 20 | 0.745 | 0.886 | 0.104 | 0.592 | 0.722 | 0.163 |
| 40 | 0.991 | 0.591 | 0.558 | 1.000 | 0.877 | 0.820 | |
| 60 | 0.749 | 0.124 | 0.342 | 0.514 | 0.740 | 0.928 | |
| 80 | 0.788 | 0.453 | 0.594 | 0.697 | 0.841 | 0.628 | |
| 100 | 0.736 | 0.325 | 0.240 | 0.644 | 0.981 | 0.910 |
Results of post-hoc least significant difference (LSD) with HD value among different atlas library groups.
| Atlasgroup | Atlasgroup | CTV | Bladder | Rectum | Femoral head-L | Femoralhead-R | Spinal cord |
|---|---|---|---|---|---|---|---|
| 20 | 40 | 0.195 | 0.829 | 0.723 | 0.169 | 0.356 | 0.064 |
| 60 | 0.287 | 0.789 | 0.602 | 0.413 | 0.164 | 0.637 | |
| 80 | 0.164 | 0.834 | 0.551 | 0.069 | 0.067 | 0.773 | |
| 100 | 0.120 | 0.813 | 0.970 | 0.162 | 0.153 | 0.340 | |
| 120 | 0.261 | 0.737 | 0.421 | 0.180 | 0.071 | 0.675 | |
| 40 | 20 | 0.195 | 0.829 | 0.723 | 0.169 | 0.356 | 0.064 |
| 60 | 0.816 | 0.629 | 0.382 | 0.574 | 0.638 | 0.098 | |
| 80 | 0.922 | 0.670 | 0.343 | 0.654 | 0.138 | 0.067 | |
| 100 | 0.791 | 0.983 | 0.696 | 0.981 | 0.610 | 0.240 | |
| 120 | 0.117 | 0.581 | 0.248 | 0.971 | 0.372 | 0.088 | |
| 60 | 20 | 0.287 | 0.789 | 0.602 | 0.413 | 0.164 | 0.637 |
| 40 | 0.816 | 0.629 | 0.382 | 0.574 | 0.638 | 0.098 | |
| 80 | 0.741 | 0.954 | 0.941 | 0.313 | 0.309 | 0.854 | |
| 100 | 0.618 | 0.614 | 0.628 | 0.558 | 0.969 | 0.628 | |
| 120 | 0.060 | 0.946 | 0.777 | 0.599 | 0.672 | 0.958 | |
| 80 | 40 | 0.164 | 0.834 | 0.551 | 0.069 | 0.067 | 0.773 |
| 60 | 0.922 | 0.670 | 0.343 | 0.654 | 0.138 | 0.067 | |
| 80 | 0.741 | 0.954 | 0.941 | 0.313 | 0.309 | 0.854 | |
| 100 | 0.867 | 0.655 | 0.576 | 0.671 | 0.328 | 0.504 | |
| 120 | 0.113 | 0.900 | 0.834 | 0.628 | 0.551 | 0.896 | |
| 100 | 20 | 0.120 | 0.813 | 0.970 | 0.162 | 0.153 | 0.340 |
| 40 | 0.791 | 0.983 | 0.696 | 0.981 | 0.610 | 0.240 | |
| 60 | 0.618 | 0.614 | 0.628 | 0.558 | 0.969 | 0.628 | |
| 80 | 0.867 | 0.655 | 0.576 | 0.671 | 0.328 | 0.504 | |
| 120 | 0.108 | 0.567 | 0.443 | 0.952 | 0.701 | 0.591 | |
| 120 | 20 | 0.261 | 0.737 | 0.421 | 0.180 | 0.071 | 0.675 |
| 40 | 0.117 | 0.581 | 0.248 | 0.971 | 0.372 | 0.088 | |
| 60 | 0.060 | 0.946 | 0.777 | 0.599 | 0.672 | 0.958 | |
| 80 | 0.113 | 0.900 | 0.834 | 0.628 | 0.551 | 0.896 | |
| 100 | 0.108 | 0.567 | 0.443 | 0.952 | 0.701 | 0.591 |
The time of ABAS automatic segmentation among different atlas library sizes.
| Time (s) | Range |
| |
|---|---|---|---|
| 20 | 114.3 | 108.7~119.9 | |
| 40 | 115.2 | 109.2~121.1 | |
| 60 | 114.1 | 100.2~128.1 | 0.974 |
| 80 | 115.8 | 103.9~127.8 | |
| 100 | 117.2 | 104.2~130.1 | |
| 120 | 119.2 | 105.8~136.7 |
Time for ABAS automatic contouring among different CT cross-slice numbers.
| CT cross-slice number | 61 | 65 | 72 | 75 | 81 | 84 | P |
|---|---|---|---|---|---|---|---|
| Time (s) | 99.9 | 106.8 | 114.0 | 120.6 | 127.9 | 134.8 | 0.032 |