Literature DB >> 35980573

Resources and Methods for the Analysis of MicroRNA Function in Drosophila.

Sromana Mukherjee1, Nicholas Sokol2.   

Abstract

Since the widespread discovery of microRNAs (miRNAs) 20 years ago, the Drosophila melanogaster model system has made important contributions to understanding the biology of this class of noncoding RNAs. These contributions are based on the amenability of this model system not only for biochemical analysis but molecular, genetic, and cell biological analyses as well. Nevertheless, while the Drosophila genome is now known to encode 258 miRNA precursors, the function of only a small minority of these have been well characterized. In this review, we summarize the current resources and methods that are available to study miRNA function in Drosophila with a particular focus on the large-scale resources that enable systematic analysis. Application of these methods will accelerate the discovery of ways that miRNAs are embedded into genetic networks that control basic features of metazoan cells.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Drosophila melanogaster; miRNA; microRNA

Mesh:

Substances:

Year:  2022        PMID: 35980573     DOI: 10.1007/978-1-0716-2541-5_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  76 in total

1.  Identification of novel genes coding for small expressed RNAs.

Authors:  M Lagos-Quintana; R Rauhut; W Lendeckel; T Tuschl
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

2.  Systematic study of Drosophila microRNA functions using a collection of targeted knockout mutations.

Authors:  Ya-Wen Chen; Shilin Song; Ruifen Weng; Pushpa Verma; Jan-Michael Kugler; Marita Buescher; Sigrid Rouam; Stephen M Cohen
Journal:  Dev Cell       Date:  2014-12-22       Impact factor: 12.270

Review 3.  Alternative miRNA biogenesis pathways and the interpretation of core miRNA pathway mutants.

Authors:  Jr-Shiuan Yang; Eric C Lai
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

4.  An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans.

Authors:  N C Lau; L P Lim; E G Weinstein; D P Bartel
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

5.  An extensive class of small RNAs in Caenorhabditis elegans.

Authors:  R C Lee; V Ambros
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

6.  MicroRNAs That Contribute to Coordinating the Immune Response in Drosophila melanogaster.

Authors:  Magda L Atilano; Marcus Glittenberg; Annabel Monteiro; Richard R Copley; Petros Ligoxygakis
Journal:  Genetics       Date:  2017-07-13       Impact factor: 4.562

7.  Drosha-independent DGCR8/Pasha pathway regulates neuronal morphogenesis.

Authors:  Arthur Luhur; Geetanjali Chawla; Yen-Chi Wu; Jing Li; Nicholas S Sokol
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-13       Impact factor: 11.205

8.  Pervasive Behavioral Effects of MicroRNA Regulation in Drosophila.

Authors:  Joao Picao-Osorio; Ines Lago-Baldaia; Pedro Patraquim; Claudio R Alonso
Journal:  Genetics       Date:  2017-05-03       Impact factor: 4.562

9.  Predicting microRNA targeting efficacy in Drosophila.

Authors:  Vikram Agarwal; Alexander O Subtelny; Prathapan Thiru; Igor Ulitsky; David P Bartel
Journal:  Genome Biol       Date:  2018-10-04       Impact factor: 13.583

10.  miRBase: from microRNA sequences to function.

Authors:  Ana Kozomara; Maria Birgaoanu; Sam Griffiths-Jones
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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