Literature DB >> 35974821

Crystal structure and Hirshfeld surface analysis of 2-(4-amino-6-phenyl-1,2,5,6-tetra-hydro-1,3,5-triazin-2-yl-idene)malono-nitrile di-methyl-formamide hemisolvate.

Ibadulla Mahmudov1, Zeliha Atioğlu2, Mehmet Akkurt3, Yusif Abdullayev4,5, Afsun Sujayev1, Ajaya Bhattarai6.   

Abstract

The title compound, 2C12H10N6·C3H7NO, crystallizes as a racemate in the monoclinic P21/c space group with two independent mol-ecules (I and II) and one di-methyl-formamide solvent mol-ecule in the asymmetric unit. Both mol-ecules (I and II) have chiral centers at the carbon atoms where the triazine rings of mol-ecules I and II are attached to the phenyl ring. In the crystal, mol-ecules I and II are linked by inter-molecular N-H⋯N, N-H⋯O and C-H⋯N hydrogen bonds through the solvent di-methyl-formamide mol-ecule into layers parallel to (001). In addition, C-H⋯π inter-actions also connect adjacent mol-ecules into layers parallel to (001). The stability of the mol-ecular packing is ensured by van der Waals inter-actions between the layers. The Hirshfeld surface analysis indicates that N⋯H/H⋯N (38.3% for I; 35.0% for II), H⋯H (28.2% for I; 27.0% for II) and C⋯H/H⋯C (23.4% for I; 26.3% for II) inter-actions are the most significant contributors to the crystal packing. © Mahmudov et al. 2022.

Entities:  

Keywords:  C—H⋯π inter­actions; Hirshfeld surface analysis; crystal structure; disorder; hydrogen bonds

Year:  2022        PMID: 35974821      PMCID: PMC9361369          DOI: 10.1107/S2056989022006910

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

The synthesis, design, and fabrication of novel biological and therapeutic agents remain some of the main objectives of medicinal and organic chemistry (Khalilov et al., 2021 ▸; Naghiyev et al., 2020 ▸; Safavora et al., 2019 ▸; Yadigarov et al., 2009 ▸). The crucial role of triazines is well recognized in the field of synthetic organic chemistry as well as in medicinal chemistry because these N-heterocyclic compounds are structurally similar to adenine and purine (Ganai et al., 2021 ▸; Kopylovich et al., 2014 ▸; Gurbanov et al., 2020a ▸,b ▸). Moreover, triazines play an important role in photo-triggered structural switching, in the printing market, as ionophores, in the design of functional materials attributed to smart hydrogen bonding, in liquid crystals, self-assembled layers, semiconductors, as analytical reagents for the detection of metal ions, indicators, photoluminescent materials, catalysts, spin-coating films, and optical recording media (Blotny, 2006 ▸; Liu et al., 2019 ▸). Depending on the attached non-covalent bond donor or acceptor substituents, the functional properties of N-heterocyclic compounds and their metal complexes can be improved (Ma et al., 2020 ▸, 2021 ▸; Mahmudov et al., 2020 ▸, 2021 ▸, 2022 ▸). Substituted triazine derivatives can be synthesized by several different routes. The most common protocols are nucleophilic aromatic substitution of cyanuric chloride, cyclo­addition reactions to form the triazine ring, and cyclo­trimerization of organic cyanamides and nitriles. Notably, the direct multicomponent reaction is both effective and easy, and can yield the desired compounds in a single-step reaction. Herein, we have synthesized 2-(4-amino-6-phenyl-5,6-di­hydro-1,3,5-triazin-2(1H)-yl­idene)malono­nitrile by a one-pot multicomponent reaction of (E)-1-[amino­(1H-pyrazol-1-yl)meth­yl­ene]guanidinium chloride with benzaldehyde in the presence of malono­nitrile in methanol.

Structural commentary

The title compound (Fig. 1 ▸) contains the two independent mol­ecules (mol­ecule I with N1 and mol­ecule II with N7) and one di­methyl­formamide solvent mol­ecule in the asymmetric unit. The triazine ring (N1–N3/C1–C3) in I adopts a distorted envelope conformation with puckering parameters (Cremer & Pople, 1975 ▸) Q(2) = 0.2149 (17) Å and φ(2) = 246.1 (4)°, while the triazine ring (N7–N9/C13–C15) in II has an envelope conformation [Q(2) = 0.2242 (17) Å, φ(2) = 238.4 (4)°]. Fig. 2 ▸ shows the overlay of mol­ecules I and II in the asymmetric unit, with an r.m.s. deviation of 0.170 Å. The phenyl ring of mol­ecule I is disordered over two sets of sites with an occupancy ratio of 0.67 (3):0.33 (3) (major component C4–C9 and minor component C4A–C9A). These disordered phenyl rings are at a dihedral angle of 6.0 (13)° to each other and the major and minor disorder components make dihedral angles of 86.9 (5) and 87.5 (12)°, respectively, with the mean plane of the triazine ring of mol­ecule I. The phenyl ring (C16–C21) in II makes a dihedral angle of 86.65 (9)° with the mean plane of the triazine ring. There is one stereogenic center in both racemic mol­ecules and the chirality about atoms C1 in I and C13 in II is S in the chosen asymmetric unit. Mol­ecules I and II have normal geometric parameters.
Figure 1

The mol­ecular structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level. Only the major disordered fragments are shown for clarity.

Figure 2

Least-squares overlay image (OLEX2; Dolomanov et al., 2009 ▸) of the two independent mol­ecules (I and II) in the asymmetric unit of the title compound. Only the major component of disorder for mol­ecule I is shown. Color code: carbon (gray), hydrogen (white) and nitro­gen (blue).

Supra­molecular features and Hirshfeld surface analysis

In the crystal, mol­ecules I and II are linked by inter­molecular N—H⋯N, N—H⋯O and C—H⋯N hydrogen bonds (Table 1 ▸) through the solvent di­methyl­formamide mol­ecule into layers parallel to (001) (Figs. 3 ▸ and 4 ▸). Furthermore, C—H⋯π inter­actions (Table 1 ▸) connect the mol­ecules into layers parallel to (001) (Figs. 5 ▸ and 6 ▸). van der Waals inter­actions between the layers ensure the stability of the mol­ecular packing.
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 and Cg5 are the centroids of the major component of the C4–C9 phenyl ring of mol­ecule I and the C16–C21 phenyl ring of mol­ecule II, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯N5i 0.912.202.989 (2)145
N3—H3N⋯N12ii 0.902.153.029 (2)164
N4—H4A⋯O10.902.162.9493 (19)147
N4—H4A⋯N11iii 0.902.453.044 (2)124
N4—H4B⋯N8iii 0.902.213.096 (2)169
N7—H7N⋯O10.902.533.240 (2)136
N7—H7N⋯N11iii 0.902.263.018 (2)141
N9—H9N⋯N6iv 0.922.122.997 (2)158
N10—H10A⋯O10.902.132.9566 (19)152
N10—H10A⋯N5i 0.902.523.079 (2)121
N10—H10B⋯N2i 0.902.213.094 (2)166
C1—H1A⋯N11v 1.002.713.457 (3)132
C13—H13A⋯N12vi 1.002.643.484 (2)143
C27—H27BCg2vii 0.982.853.664 (7)141
C26—H26ECg50.982.923.714 (3)139

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

Figure 3

A partial view down the a axis of the N—H⋯N, N—H⋯O and C—H⋯N hydrogen bonds (dashed lines) in the title compound. The minor disordered components have been omitted for clarity.

Figure 4

View down the c axis of the N—H⋯N, N—H⋯O and C—H⋯N hydrogen bonds (dashed lines) in the title compound. The minor disordered components have been omitted for clarity.

Figure 5

A partial view down the a axis of the C—H⋯π inter­actions (dashed lines) in the title compound. The minor disordered components and hydrogen atoms not involved in hydrogen bonding have been omitted for clarity.

Figure 6

A partial view down the c axis of the C—H⋯π inter­actions (dashed lines) in the title compound. The minor disordered components and hydrogen atoms not involved in hydrogen bonding have been omitted for clarity.

Hirshfeld surfaces for both mol­ecules were calculated using Crystal Explorer17 (Turner et al., 2017 ▸). The d norm mappings for mol­ecules I and II were performed in the ranges −0.4528 to +1.2207 a.u. and −0.4546 to +1.3342 a.u., respectively. The locations of the N—H⋯N, N—H⋯O and C—H⋯N inter­actions are shown by intense red circles on the d norm surfaces (Fig. 7 ▸ a,b for I and Fig. 7 ▸ c,d for II).
Figure 7

Front and back views of the three-dimensional Hirshfeld surfaces of mol­ecules I (a,b) and II (c,d) of the title compound.

Fig. 8 ▸ shows the full two-dimensional fingerprint plots for each mol­ecule and those delineated into the major contacts. N⋯H/H⋯N inter­actions (Fig. 8 ▸ b; 38.3% contribution for I; 35.0% for II) are the major factor in the crystal packing with H⋯H (Fig. 8 ▸ c; 28.2% for I; 27.0% for II) and C⋯H/H⋯C (Fig. 8 ▸ d; 23.4% for I; 26.3% for II) inter­actions representing the next highest contributions. The percentage contributions of comparatively weaker inter­actions are N⋯C/C⋯N (3.7% for I; 5.5% for II), N⋯N (2.6% for I; 1.9% for II), O⋯H/H⋯O (2.3% for I; 2.7% for II), C⋯C (1.3% for I; 1.3% for II) and O⋯N/N⋯O (0.2% for I; 0.2% for II). The data comparison shows that the surroundings of mol­ecules I and II are quite similar. Short contacts are summarized in Table 2 ▸.
Figure 8

Two-dimensional fingerprint plots for mol­ecules I and II of the title compound, showing (a) all inter­actions, and delineated into (b) N⋯H/H⋯N, (c) H⋯H and (d) C⋯H/H⋯C inter­actions. The d i and d e values are the closest inter­nal and external distances (in Å) from given points on the Hirshfeld surface.

Table 2

Summary of short inter­atomic contacts (Å) in the title compound

H1N⋯N52.20−1 + x, y, z
H4B⋯N82.211 + x, y, z
N2⋯H19A 2.591 − x, −  + y,  − z
N6⋯H9N 2.121 + x, −1 + y, z
H4A⋯O12.16 x, y, z
N5⋯N43.2892 − x, 1 − y, 1 − z
N5⋯O13.1711 + x, y, z
N6⋯N93.2941 − x, 1 − y, 1 − z
C5⋯H27B 2.881 − x, −  + y,  − z
H7A⋯H17A 2.60-x, −  + y,  − z
H8A⋯C202.67 x, −1 + y, z
H8A⋯H26B 2.18-x, −  + y,  − z
H1A⋯N112.71-x, 1 − y, 1 − z
H10A⋯O12.13 x, y, z
H7N⋯N112.261 + x, y, z
H10B⋯N22.21−1 + x, y, z
N11⋯O13.134−1 + x, y, z
H13A⋯N122.64-x, 2 − y, 1 − z
C19⋯H26F 2.87-x,  + y,  − z
H20A⋯H27A 2.561 − x,  + y,  − z
H26B⋯H8A 2.18x,  + y,  − z

Database survey

Two related compounds with the 1,2,3,4-tetra­hydro-1,3,5-triazine unit have been reported, viz. 3-(p-chloro­phen­yl)-4-[(dimethyl-4,6 pyridyl-2) meth­yl]-4,6-diphenyl-2-oxo-1,2,3,4-tetra­hydro-13,5-triazine [(A); Viossat et al., 1989 ▸] and 1-[(3,4-di­chloro­phen­yl)meth­oxy]-1,6-di­hydro-6,6-dimethyl-1,3,5-triazine-2,4-di­amine hydro­chloride 0.29-hydrate [(B); Ammon & Plastas, 1979 ▸]. In the crystal of (A), the 1,2,3,4-tetra­hydro-1,3,5-triazine ring exhibits a sofa conformation. Inter­molecular N—H⋯O hydrogen bonding links pairs of mol­ecules connected by a symmetry center, forming an octa­gonal unit. In the crystal of (B), the di­hydro­triazine nucleus is protonated at N5, where positive-charge delocalization is maximized. Except for one H atom on N4, all of the N-bound H atoms are involved in either H⋯N or H⋯CI inter­actions.

Synthesis and crystallization

A mixture of (E)-1-[amino­(1H-pyrazol-1-yl)methyl­ene]guanidinium chloride (188 mg, 1 mmol), benzaldehyde (106 mg, 1 mmol) and malono­nitrile (66 mg, 1 mmol) was refluxed in methanol for 5 h. The solvent was subsequently removed in vacuo, and the residue was recrystallized from methanol using charcoal. Crystals suitable for X-ray analysis were obtained by slow evaporation of a DMF solution. Colorless solid (47%); Analysis calculated for C27H27N13O (M = 549.6): C 59.01, H 4.95, N 33.13; found: C 58.98, H 4.89, N 33.07%. 1H NMR (DMSO-d 6) δ 8.58 (NH), 8.30 (NH), 7.95 (CH), 7.31–7.45 (5H, Ar–H), 5.62 (CH), 2.72 and 2.88 (2CH3). 13C NMR (DMSO-d 6) δ 165.17, 162.44, 155.68, 141.91, 128.78, 128.72, 125.73, 119.45, 119.19, 61.80, 37.67, 35.87. ESI–MS: m/z: 550.5 [M + H]+.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. Carbon-bound H atoms were placed in calculated positions [C—H = 0.95–1.00 Å; U iso(H) = 1.2 or 1.5U eq(C)] and were included in the refinement in the riding-model approximation. The N-bound H atoms were located in a difference-Fourier map and were fixed at their found positions and refined with a riding model with U iso(H) set to 1.2U eq(N). In mol­ecule I, the C6(C6A)–C9(C9A) atoms in the C4–C9 phenyl ring are disordered over two sets of sites with an occupancy ratio of 0.67 (3):0.33 (3). The H atoms of a methyl group (C26) of the di­methyl­formamide solvent were refined as disordered [C—H = 0.98 Å and U iso(H) = 1.5U eq(C)], using AFIX 127 (rotating disordered methyl group) and a free variable for the two groups of H atoms with an occupancy ratio of 0.66 (3):0.34 (3). For the two disordered parts of the phenyl ring of mol­ecule I, the corresponding ring of mol­ecule II, which is not disordered, was used as a template using a SAME command. Furthermore, the displacement parameters of the C atoms of the major and minor components of the disordered phenyl ring were restrained with a SIMU 0.02 command, while the displacement parameters of the C atoms of the major and minor components of the disordered phenyl ring attached to the triazine ring of mol­ecule I (C4 and C4A) were constrained to have identical ADPs using an EADP instruction. All the C—C bonds between the phenyl and triazine rings were restrained to be similar to each other using a SADI instruction.
Table 3

Experimental details

Crystal data
Chemical formula2C12H10N6·C3H7NO
M r 549.61
Crystal system, space groupMonoclinic, P21/c
Temperature (K)150
a, b, c (Å)8.9102 (4), 13.5595 (7), 22.0520 (12)
β (°)98.024 (2)
V3)2638.2 (2)
Z 4
Radiation typeMo Kα
μ (mm−1)0.09
Crystal size (mm)0.30 × 0.26 × 0.26
 
Data collection
DiffractometerBruker D8 Quest PHOTON 100 detector
Absorption correctionMulti-scan (SADABS; Bruker, 2018)
T min, T max 0.960, 0.965
No. of measured, independent and observed [I > 2σ(I)] reflections19167, 5368, 4215
R int 0.045
(sin θ/λ)max−1)0.625
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.045, 0.111, 1.02
No. of reflections5368
No. of parameters422
No. of restraints219
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.24, −0.23

Computer programs: APEX3 (Bruker, 2018 ▸), SAINT (Bruker, 2018 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2018 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), PLATON (Spek, 2020 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989022006910/zl5032sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989022006910/zl5032Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989022006910/zl5032Isup3.cml CCDC reference: 2184452 Additional supporting information: crystallographic information; 3D view; checkCIF report
2C12H10N6·C3H7NOF(000) = 1152
Mr = 549.61Dx = 1.384 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.9102 (4) ÅCell parameters from 7300 reflections
b = 13.5595 (7) Åθ = 2.4–26.4°
c = 22.0520 (12) ŵ = 0.09 mm1
β = 98.024 (2)°T = 150 K
V = 2638.2 (2) Å3Block, colourless
Z = 40.30 × 0.26 × 0.26 mm
Bruker D8 Quest PHOTON 100 detector diffractometer4215 reflections with I > 2σ(I)
φ and ω scansRint = 0.045
Absorption correction: multi-scan (SADABS; Bruker, 2018)θmax = 26.4°, θmin = 2.4°
Tmin = 0.960, Tmax = 0.965h = −11→11
19167 measured reflectionsk = −16→15
5368 independent reflectionsl = −27→27
Refinement on F2Primary atom site location: dual
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.111w = 1/[σ2(Fo2) + (0.0406P)2 + 1.738P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
5368 reflectionsΔρmax = 0.24 e Å3
422 parametersΔρmin = −0.23 e Å3
219 restraints
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O10.30549 (14)0.59988 (10)0.36140 (6)0.0299 (3)
N10.52574 (16)0.42828 (11)0.43293 (7)0.0221 (3)
H1N0.4316020.4549840.4325990.027*
N20.78571 (15)0.45380 (10)0.42654 (6)0.0171 (3)
N30.69117 (16)0.29369 (11)0.44016 (7)0.0215 (3)
H3N0.7037540.2279920.4438120.026*
N40.61899 (16)0.58380 (11)0.42444 (7)0.0227 (3)
H4A0.5244260.6084450.4169450.027*
H4B0.6968500.6254640.4225750.027*
N51.19175 (17)0.42192 (12)0.43645 (8)0.0280 (4)
N60.99550 (18)0.12911 (12)0.42191 (8)0.0302 (4)
N70.11862 (16)0.77458 (11)0.41760 (7)0.0206 (3)
H7N0.2100640.7471670.4149220.025*
N8−0.14262 (15)0.74913 (10)0.42123 (6)0.0176 (3)
N9−0.03848 (16)0.90970 (10)0.42920 (7)0.0197 (3)
H9N−0.0525830.9767970.4308020.024*
N100.01996 (17)0.61859 (11)0.41453 (7)0.0228 (3)
H10A0.1108230.5958690.4074320.027*
H10B−0.0550880.5779080.4220650.027*
N11−0.53959 (18)0.78121 (12)0.43275 (8)0.0307 (4)
N12−0.33307 (19)1.07238 (11)0.45473 (8)0.0298 (4)
N130.27178 (17)0.59511 (12)0.25719 (7)0.0265 (3)
C10.53378 (19)0.32208 (13)0.42361 (8)0.0224 (4)
H1A0.4712240.2881290.4516120.027*
C20.64407 (18)0.48767 (12)0.42791 (7)0.0177 (3)
C30.80600 (18)0.35521 (12)0.43296 (7)0.0168 (3)
C40.475 (3)0.293 (2)0.3576 (4)0.0241 (10)0.67 (3)
C50.5563 (13)0.3177 (10)0.3101 (4)0.0246 (14)0.67 (3)
H50.6502820.3514180.3189580.030*0.67 (3)
C60.5012 (13)0.2932 (9)0.2499 (4)0.0305 (15)0.67 (3)
H60.5573680.3107790.2179270.037*0.67 (3)
C70.3649 (13)0.2433 (8)0.2360 (5)0.0336 (18)0.67 (3)
H70.3278830.2264160.1948270.040*0.67 (3)
C80.2835 (11)0.2183 (9)0.2827 (6)0.0387 (19)0.67 (3)
H80.1899130.1842800.2735670.046*0.67 (3)
C90.3386 (15)0.2431 (11)0.3432 (5)0.0328 (18)0.67 (3)
H90.2819540.2254720.3750380.039*0.67 (3)
C4A0.463 (6)0.290 (5)0.3608 (8)0.0241 (10)0.33 (3)
C5A0.525 (3)0.317 (2)0.3093 (10)0.034 (4)0.33 (3)
H5A0.6113480.3580190.3131070.041*0.33 (3)
C6A0.461 (3)0.2832 (19)0.2514 (9)0.037 (3)0.33 (3)
H6A0.5045160.2995880.2158230.045*0.33 (3)
C7A0.333 (3)0.2263 (16)0.2477 (10)0.037 (3)0.33 (3)
H7A0.2869870.2035830.2087480.044*0.33 (3)
C8A0.269 (2)0.2011 (17)0.2988 (11)0.039 (3)0.33 (3)
H8A0.1792050.1626760.2944870.047*0.33 (3)
C9A0.335 (3)0.231 (2)0.3568 (10)0.031 (3)0.33 (3)
H9A0.2934730.2121080.3924130.037*0.33 (3)
C100.95264 (19)0.31541 (12)0.43229 (8)0.0183 (3)
C111.08173 (19)0.37632 (12)0.43463 (8)0.0190 (4)
C120.97619 (19)0.21242 (13)0.42722 (8)0.0201 (4)
C130.10164 (19)0.88025 (13)0.40755 (8)0.0196 (4)
H13A0.1879000.9145010.4329450.023*
C14−0.00174 (18)0.71515 (12)0.41738 (7)0.0178 (3)
C15−0.15596 (18)0.84747 (12)0.42933 (7)0.0168 (3)
C160.1034 (2)0.90787 (13)0.34077 (8)0.0219 (4)
C17−0.0200 (2)0.88610 (15)0.29677 (8)0.0292 (4)
H17A−0.1065440.8544860.3085680.035*
C18−0.0172 (3)0.91034 (16)0.23572 (9)0.0357 (5)
H18A−0.1018890.8957310.2059200.043*
C190.1086 (3)0.95557 (16)0.21852 (10)0.0398 (5)
H19A0.1109390.9718490.1767600.048*
C200.2309 (3)0.97723 (17)0.26174 (11)0.0424 (6)
H20A0.3173721.0084720.2496080.051*
C210.2291 (2)0.95370 (15)0.32333 (10)0.0337 (5)
H21A0.3137110.9691130.3529970.040*
C22−0.29893 (19)0.88657 (12)0.43818 (8)0.0193 (3)
C23−0.42860 (19)0.82637 (13)0.43560 (8)0.0203 (4)
C24−0.31897 (19)0.98876 (13)0.44757 (8)0.0208 (4)
C250.3387 (2)0.56969 (14)0.31214 (9)0.0270 (4)
H25A0.4199690.5239330.3139820.032*
C260.1468 (3)0.66418 (18)0.24990 (11)0.0448 (6)
H26A0.1094910.6731800.2892820.067*0.66 (3)
H26B0.0649730.6384620.2197370.067*0.66 (3)
H26C0.1813350.7276860.2357400.067*0.66 (3)
H26D0.1277080.6863720.2072240.067*0.34 (3)
H26E0.1722260.7210900.2767690.067*0.34 (3)
H26F0.0558640.6318660.2607650.067*0.34 (3)
C270.3222 (3)0.55731 (17)0.20144 (9)0.0368 (5)
H27A0.3979000.5054410.2120580.055*
H27B0.3672250.6110490.1803430.055*
H27C0.2353330.5300700.1744880.055*
U11U22U33U12U13U23
O10.0223 (7)0.0420 (8)0.0255 (7)0.0013 (6)0.0040 (5)−0.0020 (6)
N10.0142 (7)0.0216 (8)0.0311 (8)0.0016 (6)0.0051 (6)−0.0015 (6)
N20.0144 (7)0.0186 (7)0.0183 (7)0.0008 (5)0.0026 (5)−0.0012 (6)
N30.0167 (7)0.0166 (7)0.0310 (8)0.0005 (6)0.0027 (6)0.0037 (6)
N40.0155 (7)0.0195 (7)0.0326 (8)0.0013 (6)0.0015 (6)−0.0006 (6)
N50.0183 (8)0.0261 (8)0.0397 (9)0.0009 (7)0.0046 (7)0.0008 (7)
N60.0291 (9)0.0205 (9)0.0409 (10)0.0016 (7)0.0050 (7)−0.0011 (7)
N70.0137 (7)0.0211 (7)0.0272 (8)0.0027 (6)0.0040 (6)0.0033 (6)
N80.0161 (7)0.0178 (7)0.0191 (7)0.0008 (6)0.0032 (5)0.0003 (6)
N90.0195 (7)0.0162 (7)0.0243 (7)−0.0003 (6)0.0059 (6)−0.0001 (6)
N100.0190 (7)0.0184 (7)0.0324 (8)0.0025 (6)0.0092 (6)0.0001 (6)
N110.0206 (8)0.0250 (8)0.0471 (10)0.0012 (7)0.0075 (7)−0.0042 (7)
N120.0307 (9)0.0217 (9)0.0385 (10)0.0011 (7)0.0105 (7)−0.0035 (7)
N130.0242 (8)0.0297 (9)0.0254 (8)0.0020 (7)0.0027 (6)−0.0001 (7)
C10.0166 (8)0.0200 (9)0.0311 (10)−0.0011 (7)0.0052 (7)0.0029 (7)
C20.0170 (8)0.0205 (9)0.0154 (8)−0.0008 (7)0.0014 (6)−0.0014 (6)
C30.0167 (8)0.0201 (8)0.0133 (8)−0.0017 (6)0.0010 (6)0.0000 (6)
C40.018 (4)0.019 (2)0.0351 (13)0.003 (2)−0.0004 (14)−0.0016 (19)
C50.019 (3)0.029 (2)0.024 (2)−0.001 (3)−0.0033 (18)−0.0002 (17)
C60.026 (4)0.029 (3)0.034 (2)0.001 (2)−0.004 (2)−0.0017 (17)
C70.026 (4)0.035 (3)0.036 (3)0.001 (3)−0.008 (3)−0.010 (2)
C80.021 (3)0.043 (4)0.051 (5)−0.006 (2)0.000 (3)−0.011 (3)
C90.023 (2)0.033 (4)0.043 (3)−0.002 (2)0.007 (3)−0.005 (3)
C4A0.018 (4)0.019 (2)0.0351 (13)0.003 (2)−0.0004 (14)−0.0016 (19)
C5A0.020 (7)0.030 (5)0.049 (6)−0.006 (5)−0.009 (4)−0.004 (4)
C6A0.036 (8)0.038 (6)0.035 (5)0.001 (6)−0.008 (5)−0.003 (4)
C7A0.024 (7)0.036 (6)0.048 (7)−0.005 (5)−0.006 (5)−0.009 (5)
C8A0.026 (5)0.040 (7)0.049 (7)0.000 (4)−0.003 (5)−0.012 (5)
C9A0.018 (4)0.027 (6)0.047 (6)−0.003 (4)0.004 (5)−0.009 (6)
C100.0177 (8)0.0184 (8)0.0187 (8)0.0006 (7)0.0027 (6)−0.0004 (6)
C110.0181 (8)0.0194 (8)0.0195 (8)0.0054 (7)0.0033 (6)0.0011 (7)
C120.0165 (8)0.0234 (10)0.0202 (9)−0.0009 (7)0.0023 (7)0.0013 (7)
C130.0156 (8)0.0214 (9)0.0217 (9)−0.0006 (7)0.0027 (6)0.0014 (7)
C140.0173 (8)0.0207 (8)0.0152 (8)−0.0002 (7)0.0021 (6)0.0012 (6)
C150.0178 (8)0.0195 (8)0.0129 (8)−0.0003 (7)0.0013 (6)0.0009 (6)
C160.0244 (9)0.0184 (9)0.0239 (9)0.0042 (7)0.0074 (7)0.0014 (7)
C170.0332 (10)0.0291 (10)0.0250 (9)0.0021 (8)0.0030 (8)0.0006 (8)
C180.0478 (13)0.0362 (11)0.0226 (10)0.0112 (10)0.0028 (9)0.0014 (8)
C190.0616 (15)0.0346 (12)0.0266 (11)0.0144 (11)0.0181 (10)0.0070 (9)
C200.0482 (14)0.0404 (13)0.0447 (13)0.0000 (11)0.0280 (11)0.0081 (10)
C210.0309 (11)0.0362 (11)0.0365 (11)−0.0016 (9)0.0129 (9)0.0037 (9)
C220.0190 (8)0.0176 (8)0.0216 (8)0.0007 (7)0.0040 (7)−0.0006 (7)
C230.0191 (9)0.0189 (9)0.0234 (9)0.0046 (7)0.0043 (7)−0.0006 (7)
C240.0175 (8)0.0252 (10)0.0202 (9)0.0003 (7)0.0048 (7)0.0013 (7)
C250.0223 (9)0.0297 (10)0.0285 (10)0.0023 (8)0.0024 (8)−0.0002 (8)
C260.0381 (12)0.0516 (14)0.0442 (13)0.0162 (11)0.0035 (10)0.0100 (11)
C270.0419 (12)0.0415 (12)0.0273 (10)−0.0010 (10)0.0062 (9)−0.0051 (9)
O1—C251.235 (2)C8—C91.398 (7)
N1—C21.343 (2)C8—H80.9500
N1—C11.458 (2)C9—H90.9500
N1—H1N0.9127C4A—C5A1.379 (13)
N2—C21.347 (2)C4A—C9A1.381 (13)
N2—C31.354 (2)C5A—C6A1.397 (13)
N3—C31.347 (2)C5A—H5A0.9500
N3—C11.451 (2)C6A—C7A1.369 (12)
N3—H3N0.9001C6A—H6A0.9500
N4—C21.323 (2)C7A—C8A1.373 (12)
N4—H4A0.9000C7A—H7A0.9500
N4—H4B0.9000C8A—C9A1.392 (13)
N5—C111.155 (2)C8A—H8A0.9500
N6—C121.151 (2)C9A—H9A0.9500
N7—C141.341 (2)C10—C111.411 (2)
N7—C131.454 (2)C10—C121.419 (2)
N7—H7N0.9050C13—C161.522 (2)
N8—C141.351 (2)C13—H13A1.0000
N8—C151.353 (2)C15—C221.418 (2)
N9—C151.345 (2)C16—C211.381 (3)
N9—C131.454 (2)C16—C171.393 (3)
N9—H9N0.9198C17—C181.389 (3)
N10—C141.326 (2)C17—H17A0.9500
N10—H10A0.9001C18—C191.376 (3)
N10—H10B0.9000C18—H18A0.9500
N11—C231.157 (2)C19—C201.376 (3)
N12—C241.154 (2)C19—H19A0.9500
N13—C251.320 (2)C20—C211.397 (3)
N13—C261.447 (3)C20—H20A0.9500
N13—C271.459 (2)C21—H21A0.9500
C1—C4A1.506 (12)C22—C231.409 (2)
C1—C41.527 (6)C22—C241.416 (2)
C1—H1A1.0000C25—H25A0.9500
C3—C101.416 (2)C26—H26A0.9800
C4—C91.392 (7)C26—H26B0.9800
C4—C51.393 (7)C26—H26C0.9800
C5—C61.391 (7)C26—H26D0.9800
C5—H50.9500C26—H26E0.9800
C6—C71.386 (7)C26—H26F0.9800
C6—H60.9500C27—H27A0.9800
C7—C81.381 (7)C27—H27B0.9800
C7—H70.9500C27—H27C0.9800
C2—N1—C1121.73 (14)C8A—C9A—H9A121.1
C2—N1—H1N119.5C11—C10—C3121.69 (15)
C1—N1—H1N117.0C11—C10—C12116.75 (15)
C2—N2—C3116.49 (14)C3—C10—C12121.53 (15)
C3—N3—C1121.98 (14)N5—C11—C10176.54 (18)
C3—N3—H3N122.4N6—C12—C10178.65 (19)
C1—N3—H3N112.9N9—C13—N7107.24 (13)
C2—N4—H4A121.5N9—C13—C16112.08 (14)
C2—N4—H4B119.7N7—C13—C16112.03 (14)
H4A—N4—H4B117.8N9—C13—H13A108.5
C14—N7—C13121.69 (14)N7—C13—H13A108.5
C14—N7—H7N118.7C16—C13—H13A108.5
C13—N7—H7N118.0N10—C14—N7118.14 (15)
C14—N8—C15116.36 (14)N10—C14—N8118.86 (15)
C15—N9—C13122.20 (14)N7—C14—N8122.99 (15)
C15—N9—H9N120.7N9—C15—N8122.37 (15)
C13—N9—H9N114.4N9—C15—C22118.69 (15)
C14—N10—H10A119.1N8—C15—C22118.93 (15)
C14—N10—H10B118.6C21—C16—C17119.55 (17)
H10A—N10—H10B122.1C21—C16—C13119.91 (17)
C25—N13—C26120.88 (17)C17—C16—C13120.54 (16)
C25—N13—C27121.94 (17)C18—C17—C16120.38 (19)
C26—N13—C27117.16 (17)C18—C17—H17A119.8
N3—C1—N1106.94 (14)C16—C17—H17A119.8
N3—C1—C4A115 (3)C19—C18—C17119.9 (2)
N1—C1—C4A113 (3)C19—C18—H18A120.1
N3—C1—C4111.2 (12)C17—C18—H18A120.1
N1—C1—C4111.7 (14)C20—C19—C18120.05 (19)
N3—C1—H1A109.0C20—C19—H19A120.0
N1—C1—H1A109.0C18—C19—H19A120.0
C4—C1—H1A109.0C19—C20—C21120.6 (2)
N4—C2—N1117.85 (15)C19—C20—H20A119.7
N4—C2—N2119.06 (15)C21—C20—H20A119.7
N1—C2—N2123.09 (15)C16—C21—C20119.5 (2)
N3—C3—N2122.10 (15)C16—C21—H21A120.2
N3—C3—C10118.86 (15)C20—C21—H21A120.2
N2—C3—C10119.04 (15)C23—C22—C24116.95 (15)
C9—C4—C5118.3 (6)C23—C22—C15121.67 (15)
C9—C4—C1120.9 (8)C24—C22—C15121.33 (15)
C5—C4—C1120.8 (7)N11—C23—C22176.48 (19)
C6—C5—C4120.7 (6)N12—C24—C22178.8 (2)
C6—C5—H5119.7O1—C25—N13126.02 (18)
C4—C5—H5119.7O1—C25—H25A117.0
C7—C6—C5120.6 (7)N13—C25—H25A117.0
C7—C6—H6119.7N13—C26—H26A109.5
C5—C6—H6119.7N13—C26—H26B109.5
C8—C7—C6119.4 (6)H26A—C26—H26B109.5
C8—C7—H7120.3N13—C26—H26C109.5
C6—C7—H7120.3H26A—C26—H26C109.5
C7—C8—C9120.1 (6)H26B—C26—H26C109.5
C7—C8—H8119.9N13—C26—H26D109.5
C9—C8—H8119.9H26A—C26—H26D141.1
C4—C9—C8120.9 (7)H26B—C26—H26D56.3
C4—C9—H9119.5H26C—C26—H26D56.3
C8—C9—H9119.5N13—C26—H26E109.5
C5A—C4A—C9A121.3 (12)H26A—C26—H26E56.3
C5A—C4A—C1121.1 (17)H26B—C26—H26E141.1
C9A—C4A—C1117.6 (16)H26C—C26—H26E56.3
C4A—C5A—C6A120.6 (14)H26D—C26—H26E109.5
C4A—C5A—H5A119.7N13—C26—H26F109.5
C6A—C5A—H5A119.7H26A—C26—H26F56.3
C7A—C6A—C5A117.8 (13)H26B—C26—H26F56.3
C7A—C6A—H6A121.1H26C—C26—H26F141.1
C5A—C6A—H6A121.1H26D—C26—H26F109.5
C6A—C7A—C8A121.8 (13)H26E—C26—H26F109.5
C6A—C7A—H7A119.1N13—C27—H27A109.5
C8A—C7A—H7A119.1N13—C27—H27B109.5
C7A—C8A—C9A120.8 (13)H27A—C27—H27B109.5
C7A—C8A—H8A119.6N13—C27—H27C109.5
C9A—C8A—H8A119.6H27A—C27—H27C109.5
C4A—C9A—C8A117.7 (13)H27B—C27—H27C109.5
C4A—C9A—H9A121.1
C3—N3—C1—N1−30.9 (2)C1—C4A—C9A—C8A−180 (4)
C3—N3—C1—C4A96 (2)C7A—C8A—C9A—C4A2 (5)
C3—N3—C1—C491.4 (10)N3—C3—C10—C11−169.86 (15)
C2—N1—C1—N328.4 (2)N2—C3—C10—C119.9 (2)
C2—N1—C1—C4A−99.2 (16)N3—C3—C10—C1212.2 (2)
C2—N1—C1—C4−93.5 (8)N2—C3—C10—C12−167.99 (15)
C1—N1—C2—N4166.32 (16)C15—N9—C13—N7−28.3 (2)
C1—N1—C2—N2−14.0 (3)C15—N9—C13—C1695.08 (18)
C3—N2—C2—N4177.19 (15)C14—N7—C13—N928.7 (2)
C3—N2—C2—N1−2.5 (2)C14—N7—C13—C16−94.64 (19)
C1—N3—C3—N218.8 (2)C13—N7—C14—N10166.71 (15)
C1—N3—C3—C10−161.37 (16)C13—N7—C14—N8−14.7 (2)
C2—N2—C3—N30.2 (2)C15—N8—C14—N10174.49 (15)
C2—N2—C3—C10−179.59 (14)C15—N8—C14—N7−4.1 (2)
N3—C1—C4—C9131 (2)C13—N9—C15—N813.6 (2)
N1—C1—C4—C9−109 (3)C13—N9—C15—C22−166.34 (15)
N3—C1—C4—C5−50 (3)C14—N8—C15—N94.7 (2)
N1—C1—C4—C570 (3)C14—N8—C15—C22−175.44 (14)
C9—C4—C5—C60 (4)N9—C13—C16—C21132.95 (17)
C1—C4—C5—C6−178.6 (19)N7—C13—C16—C21−106.44 (19)
C4—C5—C6—C70 (2)N9—C13—C16—C17−47.9 (2)
C5—C6—C7—C80.3 (14)N7—C13—C16—C1772.7 (2)
C6—C7—C8—C9−0.1 (14)C21—C16—C17—C18−0.1 (3)
C5—C4—C9—C80 (4)C13—C16—C17—C18−179.21 (17)
C1—C4—C9—C8178.7 (19)C16—C17—C18—C190.4 (3)
C7—C8—C9—C40 (2)C17—C18—C19—C20−0.4 (3)
N3—C1—C4A—C5A−57 (7)C18—C19—C20—C210.0 (3)
N1—C1—C4A—C5A66 (6)C17—C16—C21—C20−0.2 (3)
N3—C1—C4A—C9A122 (5)C13—C16—C21—C20178.87 (18)
N1—C1—C4A—C9A−115 (5)C19—C20—C21—C160.3 (3)
C9A—C4A—C5A—C6A−1 (8)N9—C15—C22—C23176.58 (15)
C1—C4A—C5A—C6A178 (4)N8—C15—C22—C23−3.3 (2)
C4A—C5A—C6A—C7A2 (5)N9—C15—C22—C24−0.8 (2)
C5A—C6A—C7A—C8A−1 (3)N8—C15—C22—C24179.27 (15)
C6A—C7A—C8A—C9A−1 (3)C26—N13—C25—O1−0.1 (3)
C5A—C4A—C9A—C8A−1 (8)C27—N13—C25—O1178.26 (19)
D—H···AD—HH···AD···AD—H···A
N1—H1N···N5i0.912.202.989 (2)145
N3—H3N···N12ii0.902.153.029 (2)164
N4—H4A···O10.902.162.9493 (19)147
N4—H4A···N11iii0.902.453.044 (2)124
N4—H4B···N8iii0.902.213.096 (2)169
N7—H7N···O10.902.533.240 (2)136
N7—H7N···N11iii0.902.263.018 (2)141
N9—H9N···N6iv0.922.122.997 (2)158
N10—H10A···O10.902.132.9566 (19)152
N10—H10A···N5i0.902.523.079 (2)121
N10—H10B···N2i0.902.213.094 (2)166
C1—H1A···N11v1.002.713.457 (3)132
C13—H13A···N12vi1.002.643.484 (2)143
C27—H27B···Cg2vii0.982.853.664 (7)141
C27—H27B···Cg3vii0.982.883.707 (14)143
C26—H26E···Cg50.982.923.714 (3)139
  8 in total

1.  Resonance Assisted Chalcogen Bonding as a New Synthon in the Design of Dyes.

Authors:  Atash V Gurbanov; Maxim L Kuznetsov; Kamran T Mahmudov; Armando J L Pombeiro; Giuseppe Resnati
Journal:  Chemistry       Date:  2020-10-13       Impact factor: 5.236

2.  Crystal Structure and Hirshfeld Surface Analysis of Acetoacetanilide Based Reaction Products.

Authors:  Farid N Naghiyev; Jonathan Cisterna; Ali N Khalilov; Abel M Maharramov; Rizvan K Askerov; Khammed A Asadov; Ibrahim G Mamedov; Khaver S Salmanli; Alejandro Cárdenas; Ivan Brito
Journal:  Molecules       Date:  2020-05-09       Impact factor: 4.411

3.  Noncovalent Interactions at Lanthanide Complexes.

Authors:  Kamran T Mahmudov; Fatali E Huseynov; Vusala A Aliyeva; M Fátima C Guedes da Silva; Armando J L Pombeiro
Journal:  Chemistry       Date:  2021-08-06       Impact factor: 5.236

4.  CrystalExplorer: a program for Hirshfeld surface analysis, visualization and quantitative analysis of molecular crystals.

Authors:  Peter R Spackman; Michael J Turner; Joshua J McKinnon; Stephen K Wolff; Daniel J Grimwood; Dylan Jayatilaka; Mark A Spackman
Journal:  J Appl Crystallogr       Date:  2021-04-27       Impact factor: 3.304

5.  iotbx.cif: a comprehensive CIF toolbox.

Authors:  Richard J Gildea; Luc J Bourhis; Oleg V Dolomanov; Ralf W Grosse-Kunstleve; Horst Puschmann; Paul D Adams; Judith A K Howard
Journal:  J Appl Crystallogr       Date:  2011-10-29       Impact factor: 3.304

6.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

8.  checkCIF validation ALERTS: what they mean and how to respond.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2020-01-01
  8 in total

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