Literature DB >> 35972540

Complete genome sequence of a novel lytic bacteriophage, PLG-II, specific for Lactococcus garvieae serotype II strains that are pathogenic to fish.

Muhammad Akmal1,2, Issei Nishiki3, Nikita Zrelovs4, Terutoyo Yoshida3.   

Abstract

A novel lytic siphophage, PLG-II, which is specific for Lactococcus garvieae serotype II strains that are pathogenic to fish, was isolated from seawater samples collected from Miyazaki Prefecture, Japan. Whole-genome sequencing showed that the PLG-II genome is a 32,271-bp double-stranded DNA molecule, with an average GC content of 37.74%. It contains 69 open reading frames (ORFs), 43 of which currently have no reliable functional annotation for their product, as well as a single tRNA. Comparative genomics analysis suggests that phage PLG-II might represent a novel species in the genus Uwajimavirus.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

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Year:  2022        PMID: 35972540     DOI: 10.1007/s00705-022-05568-7

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.685


  10 in total

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Authors:  T M Lowe; S R Eddy
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Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
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9.  High-throughput sequence alignment using Graphics Processing Units.

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Journal:  BMC Bioinformatics       Date:  2007-12-10       Impact factor: 3.169

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  10 in total

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