Literature DB >> 35969791

Small molecule photocatalysis enables drug target identification via energy transfer.

Aaron D Trowbridge1, Ciaran P Seath1, Frances P Rodriguez-Rivera2, Beryl X Li1, Barbara E Dul3, Adam G Schwaid4, Benito F Buksh1, Jacob B Geri1, James V Oakley1, Olugbeminiyi O Fadeyi5, Rob C Oslund5, Keun Ah Ryu5, Cory White5, Tamara Reyes-Robles5, Paul Tawa6, Dann L Parker2, David W C MacMillan1.   

Abstract

Over half of new therapeutic approaches fail in clinical trials due to a lack of target validation. As such, the development of new methods to improve and accelerate the identification of cellular targets, broadly known as target ID, remains a fundamental goal in drug discovery. While advances in sequencing and mass spectrometry technologies have revolutionized drug target ID in recent decades, the corresponding chemical-based approaches have not changed in over 50 y. Consigned to outdated stoichiometric activation modes, modern target ID campaigns are regularly confounded by poor signal-to-noise resulting from limited receptor occupancy and low crosslinking yields, especially when targeting low abundance membrane proteins or multiple protein target engagement. Here, we describe a broadly general platform for photocatalytic small molecule target ID, which is founded upon the catalytic amplification of target-tag crosslinking through the continuous generation of high-energy carbene intermediates via visible light-mediated Dexter energy transfer. By decoupling the reactive warhead tag from the small molecule ligand, catalytic signal amplification results in unprecedented levels of target enrichment, enabling the quantitative target and off target ID of several drugs including (+)-JQ1, paclitaxel (Taxol), dasatinib (Sprycel), as well as two G-protein-coupled receptors-ADORA2A and GPR40.

Entities:  

Keywords:  photocatalysis; proteomics; target identification

Mesh:

Year:  2022        PMID: 35969791      PMCID: PMC9407219          DOI: 10.1073/pnas.2208077119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


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