| Literature DB >> 35966948 |
Nathan Drayson1, Janet Anstee1, Hannelie Botha1, Gemma Kerrisk1, Phillip Ford1, Bozena Wojtasiewicz2, Lesley Clementson2, James McLaughlin3, Marlee Hutton3.
Abstract
The authors present bio-optical data spanning 316 sets of observations made at 34 inland waterbodies in Australia. The data was collected over the period 2013-2021 and comprise radiometric measurements of remote sensing reflectance (Rrs), diffuse attenuation extinction coefficient (Kd); optical backscattering; absorption of coloured dissolved organic matter (aCDOM), phytoplankton (aph) and non-algal particles (aNAP); HPLC analysis of algal pigments including chlorophyll-a (CHL-a); organic and inorganic total suspended solids (TSS); and total and dissolved organic carbon concentration. Data collection has been timed to coincide with either Landsat 8 or Sentinel-2 overpasses. The dataset covers a diverse range of optical water types and is suitable for algorithm development, satellite calibration and validation as well as machine learning applications.Entities:
Keywords: Aquatic bio-optical properties; Aquatic remote sensing algorithm development; Aquatic remote sensing reflectance; Inland water quality
Year: 2022 PMID: 35966948 PMCID: PMC9364088 DOI: 10.1016/j.dib.2022.108489
Source DB: PubMed Journal: Data Brief ISSN: 2352-3409
Fig. 1Locations of a selection of waterbodies.
Data description of observations metadata file.
| Column name | Unit | Description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| site | ID | Unique identifier for each field site |
| datetime_utc | date time | date and time measurement acquisition commenced in UTC. Datetime displayed as YYYY-MM-DD HH:MM |
| waterbody | string | Name of waterbody |
| time_arrived_local | date time | Local date time measurement acquisition commenced. displayed as YYYY-MM-DD HH:MM |
| local_time_zone | string | Designation of local time zone |
| lat | float | Latitude in decimal degrees obtained with EPSG:4326 |
| lon | float | Longitude in decimal degrees obtained with EPSG:4326 |
| water_temp_degC | float | Surface temperature of the water in degrees Celsius |
| cloud_frac_pc | int | Percent fraction of cloud cover |
| water_colour | string | Short description of water colour |
| water_cond | string | Short description of water surface conditions |
| wind_speed_kn | float | Wind speed in knots |
| wind_direction | string | Cardinal wind direction |
| weather | string | Short description of weather conditions |
| secchi_depth_m | float | Secchi disc depth in meters |
| water_depth_m | float | Total water depth in meters |
| turbidity_ntu | float | Turbidity in Nephelometric Turbidity Unit (NTU) |
Fig. 2Absorption budget at 400 nm for samples in the absorption_fitted datafile.
Fig. 3Distribution of chlorophyll-a concentrations.
Fig. 5Characteristics of backscattering data, left particulate backscattering spectra, top right: distribution of particulate backscattering spectral slope, bottom right: particulate backscattering at 555 nm. Note backscattering spectra plotted using Eq. (12).
Data description of the unfitted absorption dataset.
| Column name | Unit | Description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| aCDOM | m–1 | Absorption coefficient for coloured dissolved organic matter |
| ad | m–1 | Absorption coefficient for non-algal particles |
| ap | m–1 | Absorption coefficient for particles |
| abs_wls | nm | wavelengths of absorption coefficients |
| qflag_aCDOM_uf | integer | quality control flag for CDOM absorption coefficients |
| qflag_ad_uf | integer | quality control flag for non-algal particles absorption coefficients |
| qflag_ap_uf | integer | quality control flag for particulate absorption coefficients |
| comment | string | description of quality control issues |
Data description of the fitted absorption dataset.
| Column name | Unit | Description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| aCDOM | m–1 | Absorption coefficient for coloured dissolved organic matter |
| ad | m–1 | Absorption coefficient for non-algal particles |
| aph | m–1 | Absorption coefficient for phytoplankton |
| abs_wls | nm | Wavelengths of absorption coefficients |
| qflag_aCDOM_ft | integer | Quality control flag for CDOM absorption coefficients |
| qflag_ad_ft | integer | Quality control flag for non-algal particles absorption coefficients |
| qflag_aph_ft | integer | Quality control flag for phytoplankton absorption coefficients |
| comment | string | Description of quality control issues |
Quality control flags for absorption spectra.
| Quality flag | Definition |
|---|---|
| 0 | No quality issues |
| 1 | derived value from averaging of similar sites on the same field trip |
| 2 | derived value from below detection limit |
| 3 | missing laboratory/field error/unable to obtain |
| 4 | treat with caution unusual value |
Data description of organic carbon dataset.
| Column name | unit | description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| DOC | mg/L | Dissolved organic carbon in mg/L |
| TOC | mg/L | Total organic carbon in mg/L |
Fig. 4Distribution of total suspended solids (TSS).
Data description of TSS dataset.
| Column name | unit | description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| tss | mg/L | Average total suspended solids from three replicates |
| tss_inorganic | mg/L | Average inorganic suspended solids from three replicates |
| tss_organic | mg/L | Average organic suspended solids from three replicates |
| tss_std | mg/L | Standard deviation of total suspended solids from three replicates |
| tss_inorganic_std | mg/L | Standard deviation of inorganic suspended solids from three replicates |
| tss_organic_std | mg/L | Standard deviation of organic suspended solids from three replicates |
Fig. 6Radiometry measurement geometry.
Fig. 7radiometric measurement stages — (A) above surface, (B) interface and (C) profile. At the above surface stage, LT is the total radiance reaching the sensor, this quantity is composed of reflected light (Lref) and the water leaving radiance (Lw). Lw consists of the upward radiance (Lu) transmitted through the water surface.
Data description for radiometry dataset.
| Column Name | Unit | Description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set. |
| datetime_utc | Date-time | Date-time for start of measurement. Format yyyy-mm-dd hh:mm:ss:f in universal time coordinated time scale. |
| method | categorical | Confirms interface or kutser methods. |
| Rrs | sr–1 | Remote sensing reflectance ( |
| wls | nm | Wavelengths radiometric measurement. |
Data description for kd dataset.
| Column Name | Unit | Description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| Ed_zero | mW m–2 | Ed 0–, irradiance at 0m below the water surface extrapolated from fitting data to |
| Kd | m–1 | Diffuse attenuation coefficient extrapolated from fitting data to |
| Kd_std_error | m–1 | Standard error in Kd. |
| Kd_wls | nm | Wavelengths for Kd in nanometres. |
Data description for the bb_surface datafile.
| Column Name | Unit | Description |
|---|---|---|
| observation_id | ID | Unique identifier for each measurement set |
| method | categorical | Method used, one of: surface_bb2 - measurement made at surface using bb2 dilution - obtained using serial dilutions using bb9 bucket - measurement made in bucket using surface water sample bb9_ |
| beta_raw | m–1 sr–1 | Volume scattering function at 124 degrees at bbwls wavelengths. |
| beta_cor | m–1 sr–1 | Absorption corrected volume scattering function at 124 degrees at bbwls wavelengths. |
| bbp | m–1 | Particulate backscattering coefficients at bbwls wavelengths. |
| bbwls | nm | Wavelengths of the backscattering meter in nanometres. |
| gamma_bbp | - | Particulate backscattering spectral slope obtained from the 7 wavelengths that best fit |
| bbp_555 | m–1 | Particulate backscattering at 555 nm |
| Subject | Hydrology and Water quality |
| Specific subject area | Earth observation water quality |
| Type of data | Table |
| How the data were acquired | In situ instruments: |
| Data format | Raw, analysed |
| Description of data collection | Data was collected using in situ instrumentation and laboratory analysis of water samples. |
| Data source location | Institution: CSIRO |
| Data accessibility | Repository name: CSIRO Data Access Portal |