Literature DB >> 35965968

Modification to axial tracking for mobile magnetic microspheres.

Laura A Carlucci1, Wendy E Thomas1.   

Abstract

Three-dimensional particle tracking is a routine experimental procedure for various biophysical applications including magnetic tweezers. A common method for tracking the axial position of particles involves the analysis of diffraction rings whose pattern depends sensitively on the axial position of the bead relative to the focal plane. To infer the axial position, the observed rings are compared with reference images of a bead at known axial positions. Often the precision or accuracy of these algorithms is measured on immobilized beads over a limited axial range, while many experiments are performed using freely mobile beads. This inconsistency raises the possibility of incorrect estimates of experimental uncertainty. By manipulating magnetic beads in a bidirectional magnetic tweezer setup, we evaluated the error associated with tracking mobile magnetic beads and found that the error of tracking a moving magnetic bead increases by almost an order of magnitude compared to the error of tracking a stationary bead. We found that this additional error can be ameliorated by excluding the center-most region of the diffraction ring pattern from tracking analysis. Evaluation of the limitations of a tracking algorithm is essential for understanding the error associated with a measurement. These findings promise to bring increased resolution to three-dimensional bead tracking of magnetic microspheres.

Entities:  

Year:  2021        PMID: 35965968      PMCID: PMC9371438          DOI: 10.1016/j.bpr.2021.100031

Source DB:  PubMed          Journal:  Biophys Rep (N Y)        ISSN: 2667-0747


  31 in total

1.  Non-bias-limited tracking of spherical particles, enabling nanometer resolution at low magnification.

Authors:  Marijn T J van Loenhout; Jacob W J Kerssemakers; Iwijn De Vlaminck; Cees Dekker
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

2.  High Spatiotemporal-Resolution Magnetic Tweezers: Calibration and Applications for DNA Dynamics.

Authors:  David Dulin; Tao Ju Cui; Jelmer Cnossen; Margreet W Docter; Jan Lipfert; Nynke H Dekker
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

3.  Tracking single particles: a user-friendly quantitative evaluation.

Authors:  Brian C Carter; George T Shubeita; Steven P Gross
Journal:  Phys Biol       Date:  2005-03       Impact factor: 2.583

4.  Collective bacterial dynamics revealed using a three-dimensional population-scale defocused particle tracking technique.

Authors:  Mingming Wu; John W Roberts; Sue Kim; Donald L Koch; Matthew P DeLisa
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

5.  Imaging biomolecular interactions by fast three-dimensional tracking of laser-confined carrier particles.

Authors:  Volkmar Heinrich; Wesley P Wong; Ken Halvorsen; Evan Evans
Journal:  Langmuir       Date:  2008-01-17       Impact factor: 3.882

6.  Real-time visual sensing system achieving high-speed 3D particle tracking with nanometer resolution.

Authors:  Peng Cheng; Sissy M Jhiang; Chia-Hsiang Menq
Journal:  Appl Opt       Date:  2013-11-01       Impact factor: 1.980

7.  Three-dimensional particle tracking with subnanometer resolution using off-focus images.

Authors:  Zhipeng Zhang; Chia-Hsiang Menq
Journal:  Appl Opt       Date:  2008-05-01       Impact factor: 1.980

8.  Measurement of local viscoelasticity and forces in living cells by magnetic tweezers.

Authors:  A R Bausch; W Möller; E Sackmann
Journal:  Biophys J       Date:  1999-01       Impact factor: 4.033

9.  Model-free 3D localization with precision estimates for brightfield-imaged particles.

Authors:  Daniel T Kovari; David Dunlap; Eric R Weeks; Laura Finzi
Journal:  Opt Express       Date:  2019-10-14       Impact factor: 3.894

10.  Holographic Traction Force Microscopy.

Authors:  Stanislaw Makarchuk; Nicolas Beyer; Christian Gaiddon; Wilfried Grange; Pascal Hébraud
Journal:  Sci Rep       Date:  2018-02-14       Impact factor: 4.379

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