| Literature DB >> 35950060 |
Isabelle T Kiendrebeogo1,2, Abdou A Zoure1,3, Fabienne I Zongo1, Serge Y Ouedraogo1,2, Alexis Y Sawadogo4, Jospin Amegnona1, Herman K Sombie1,2, Jean T Valérie Elvira Bazie1,2, Pegdwendé A Sorgho1,2, Albert T Yonli1,2, Marie N Lamoussa Ouedraogo1,5, Dorcas Obiri-Yeboah6, Nayi Zongo7, Hierrhum A Bambara8, Jacques Simpore1,2,5.
Abstract
Background: The objective of this study is to search for mutations in the BRCA1 (c.5177_5180delGAAA and c.4986+6T>C) and BRCA2 genes (c.6445_6446delAT) in a population of women diagnosed with breast cancer.Entities:
Keywords: BRCA; Burkina Faso; genes; rs80357867; rs80358086; rs80359592
Mesh:
Substances:
Year: 2022 PMID: 35950060 PMCID: PMC9341024 DOI: 10.4314/ejhs.v32i4.5
Source DB: PubMed Journal: Ethiop J Health Sci ISSN: 1029-1857
Specific primer pairs for real-time PCR amplification (Catalogue number: 4351379)
| Gene | NM | coding | protein | dbSNP | Primer :5′-3′ (F : Forward, R:Reverse | Annealing |
| BRC | NM_007 | c.5177_5180d | p.Arg1726 | _153129647_2 | BRCA1ex18 | 57 °C |
| BRC | NM_007 | c.4986+6T>C | / | rs80358086 | BRCA1ex15 | 54 °C |
| BRC | NM_000 | c.6445_6446d | p.Ile2149* | C_154785231_ | BRCA2ex11 | 61 °C |
Sociodemographic and clinical characteristics of the study population
| Characteristic | Controls n = 70 (50%) | Cases n = 70 (50%) |
|
| ||
| <30 | 22(31.43%) | 5(7.14%) |
| 30–45 | 33(47.14%) | 26(37.14%) |
| 46–60 | 12(17.14%) | 29(41.43%) |
| >60 | 3(4.29%) | 10(14.29%) |
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| ||
| < 18,5 (Underweight) | 2(2.86%) | 2(2.86%) |
| 18,5 < IMC ≤ 24.9 (Normal) | 30(42.86%) | 15(21.43%) |
| 25 ≤ IMC ≤ 29.9 (Overweight) | 20(28.57%) | 29(41.43%) |
| ≥30 (Obeses) | 18(25.71%) | 24 (34.28%) |
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| Multiparous | 37(52.86%) | 50(71.43%) |
| Non multiparous | 33(47.14%) | 20(28.57%) |
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| Rural | 3(4.29%) | 11(15.71%) |
| Urban | 67(95.71%) | 59(84.29%) |
Genetic characteristics of the study population
| Characteristics | Contols | Cases n = 70 | OR (95%) CI | |
|
| ||||
| TTTC/TTTC (Homozygous reference allele) | 0(0%) | 0(0%) | NA | NA |
| TTTC/- (Heterozygous mutated | 69(98.57%) | 62(88.57%) | NA | NA |
| -/- (Homozygous alternative allele) | 1(1.43%) | 8(11.43%) | NA | NA |
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| ||||
| A/A (Homozygous reference allele) | 69(98.57%) | 64(91.43%) | Ref | - |
| A/G (Heterozygous alternative allele) | 1(1.43%) | 6(8.57%) | 6.46 (0.75–55.21) | 0.11 |
| G/G (Homozygous alternative allele) | 0(0%) | 0(%) | NA | NA |
| HWE | 1 | 0.89 | ||
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| ||||
| TA/TA (Homozygous reference allele) | 70(100%) | 70(100%) | Ref | - |
| TA/- (Heterozygous alternative allele) | 0(0%) | 0(0%) | NA |
|
| -/- (Homozygous alternative allele) | 0(0%) | 0(0%) | NA |
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OR: Odds ratio; 95%: CI Confidence Intervalle at 95%; : p-value; Ref: Reference; NA: Not applicable; HWE: Hardy-Weinberg Equilibrum
Figure 1Percentage of patients by treatment received.
Association between family history, parity, obesity, and genotypic expression of rs80358086 in cases
| rs80358086 | Family history of breast cancer | OR (95%) CI | ||
|
| ||||
| Yes (5) | No (65) | |||
| A/A | 1 | 64 | Ref | - |
| A/G | 4 | 2 | 128(9.46–1730.93 | < |
| G/G | 0 | 0 | NA |
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|
| |||
| A/A | 16 | 48 | Ref | - |
| A/G | 4 | 2 | 6(1–35.90) |
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| G/G | 0 | 0 | NA |
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| |||
| A/A | 16 | 48 | Ref | - |
| A/G | 1 | 5 | 1.66 (0.18–15.35) |
|
| G/G | 0 | 0 | NA |
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OR: Odds ratio; 95%CI: Confidence Intervalle at 95%; : p-value; Ref: Reference; NA: Not applicable