Literature DB >> 35949807

Expression and prognostic potential of TMEM204: a pan-cancer analysis.

Zicheng Zhen1, Minghao Li2, Muyan Zhong2, Jiaqi Liu1, Wendu Huang3, Liqun Ye4.   

Abstract

TMEM204 (Transmembrane Protein 204) is a member of the TMEM family that regulates cell function and angiogenesis. Previous studies showed that TMEM204 is related to pancreatic cancer, but its roles in other cancers remain unknown. To reveal this relationship, we conducted a pan-cancer analysis by several online databases. The expression of TMEM204 was analyzed by Oncomine and Tumor Immune Estimation Resource2.0 (TIMER2.0). The prognostic potential of TMEM204 was evaluated by the GEPIA2, UALCAN, and Oncolnc. The methylation level of gene expression was analyzed by UALCAN, and the relationship between cancer and immune invasion was displayed by TIMER2.0. The Protein-Protein Interactions Network and functional analysis of TMEM204 and its related genes were conducted by STRING and Webgestalt. We found that TMEM204 expression was up-regulated and correlated with prognosis in multiple cancers. In liver hepatocellular carcinoma (LIHC), high TMEM204 expression was associated with a good prognosis, and with high infiltrating levels of CD8+ T and CD4+ T cells, macrophages, neutrophils, and myeloid dendritic cells. In addition, the methylation level in LIHC was higher than in normal tissues. p53 signaling pathway and Fanconi anemia pathway were implicated by KEGG pathway analysis. These results indicate that TMEM204 is associated with the prognosis, methylation, and immune invasion of cancers, especially LIHC. TMEM204 may act as a prognostic marker of LIHC and its role in other cancers should be studied. IJCEP
Copyright © 2022.

Entities:  

Keywords:  Expression; TMEM204; methylation; pan-cancer analysis; prognostic biomarker

Year:  2022        PMID: 35949807      PMCID: PMC9360586     

Source DB:  PubMed          Journal:  Int J Clin Exp Pathol        ISSN: 1936-2625


  44 in total

1.  Relationship between methylome and transcriptome in patients with nonalcoholic fatty liver disease.

Authors:  Susan K Murphy; Hyuna Yang; Cynthia A Moylan; Herbert Pang; Andrew Dellinger; Manal F Abdelmalek; Melanie E Garrett; Allison Ashley-Koch; Ayako Suzuki; Hans L Tillmann; Michael A Hauser; Anna Mae Diehl
Journal:  Gastroenterology       Date:  2013-07-31       Impact factor: 22.682

Review 2.  The role of DNA methylation in ageing and cancer.

Authors:  A E Morgan; T J Davies; M T Mc Auley
Journal:  Proc Nutr Soc       Date:  2018-04-30       Impact factor: 6.297

3.  Liver cancer: from molecular pathogenesis to new therapies: summary of the EASL single topic conference.

Authors:  Jean-François Dufour; Philip Johnson
Journal:  J Hepatol       Date:  2009-12-16       Impact factor: 25.083

Review 4.  The essential kinase ATR: ensuring faithful duplication of a challenging genome.

Authors:  Joshua C Saldivar; David Cortez; Karlene A Cimprich
Journal:  Nat Rev Mol Cell Biol       Date:  2017-08-16       Impact factor: 94.444

5.  LncRNA F11-AS1 suppresses liver hepatocellular carcinoma progression by competitively binding with miR-3146 to regulate PTEN expression.

Authors:  Junkai Du; Mingyue Chen; Jianfei Liu; Pan Hu; Hong Guan; Xiaoqin Jiao
Journal:  J Cell Biochem       Date:  2019-06-06       Impact factor: 4.429

6.  Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators.

Authors:  Akihiro Fujimoto; Yasushi Totoki; Tetsuo Abe; Keith A Boroevich; Fumie Hosoda; Ha Hai Nguyen; Masayuki Aoki; Naoya Hosono; Michiaki Kubo; Fuyuki Miya; Yasuhito Arai; Hiroyuki Takahashi; Takuya Shirakihara; Masao Nagasaki; Tetsuo Shibuya; Kaoru Nakano; Kumiko Watanabe-Makino; Hiroko Tanaka; Hiromi Nakamura; Jun Kusuda; Hidenori Ojima; Kazuaki Shimada; Takuji Okusaka; Masaki Ueno; Yoshinobu Shigekawa; Yoshiiku Kawakami; Koji Arihiro; Hideki Ohdan; Kunihito Gotoh; Osamu Ishikawa; Shun-Ichi Ariizumi; Masakazu Yamamoto; Terumasa Yamada; Kazuaki Chayama; Tomoo Kosuge; Hiroki Yamaue; Naoyuki Kamatani; Satoru Miyano; Hitoshi Nakagama; Yusuke Nakamura; Tatsuhiko Tsunoda; Tatsuhiro Shibata; Hidewaki Nakagawa
Journal:  Nat Genet       Date:  2012-05-27       Impact factor: 38.330

7.  Identification of epigenetically silenced genes in human pancreatic cancer by a novel method "microarray coupled with methyl-CpG targeted transcriptional activation" (MeTA-array).

Authors:  Hideyuki Shimizu; Akira Horii; Makoto Sunamura; Fuyuhiko Motoi; Shinichi Egawa; Michiaki Unno; Shinichi Fukushige
Journal:  Biochem Biophys Res Commun       Date:  2011-06-23       Impact factor: 3.575

8.  Meiotic DNA break formation requires the unsynapsed chromosome axis-binding protein IHO1 (CCDC36) in mice.

Authors:  Marcello Stanzione; Marek Baumann; Frantzeskos Papanikos; Ihsan Dereli; Julian Lange; Angelique Ramlal; Daniel Tränkner; Hiroki Shibuya; Bernard de Massy; Yoshinori Watanabe; Maria Jasin; Scott Keeney; Attila Tóth
Journal:  Nat Cell Biol       Date:  2016-10-10       Impact factor: 28.824

9.  UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses.

Authors:  Darshan S Chandrashekar; Bhuwan Bashel; Sai Akshaya Hodigere Balasubramanya; Chad J Creighton; Israel Ponce-Rodriguez; Balabhadrapatruni V S K Chakravarthi; Sooryanarayana Varambally
Journal:  Neoplasia       Date:  2017-07-18       Impact factor: 5.715

10.  GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses.

Authors:  Zefang Tang; Chenwei Li; Boxi Kang; Ge Gao; Cheng Li; Zemin Zhang
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

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