| Literature DB >> 35945755 |
Jian Chen1, Jun Wang2, Ruihao Liu1, Haiwei Xiong1, Yingying Liu1, Mingzhi Zha1, Qiang Li1, Xuan Liu1, Mingjun Shang3, Yingliang Li1.
Abstract
BACKGROUND: The connection between B and T lymphocyte attenuator rs1982809 polymorphism and cancer risk has been investigated by several studies and yielded different results. Therefore, we adopted the meta-analysis method to assess the association of rs1982809 polymorphism with the susceptibility of cancers synthetically.Entities:
Mesh:
Substances:
Year: 2022 PMID: 35945755 PMCID: PMC9351928 DOI: 10.1097/MD.0000000000029610
Source DB: PubMed Journal: Medicine (Baltimore) ISSN: 0025-7974 Impact factor: 1.817
Figure 1.Flow chart of the screening process of eligible studies.
Characteristics of all included studies.
| Study | Year | Country | Cancer-type | Ethnicity | Genotyping methods | Control source | Case/Control | Genotype case | Genotype control | HWE |
|---|---|---|---|---|---|---|---|---|---|---|
| AA/AG/GG | AA/AG/GG | |||||||||
| Partyka | 2016 | Poland | RCC | Caucasian | TaqMan | PB | 282/470 | 145/116/21 | 279/163/28 | 0.814 |
| Karabon | 2016 | Poland | CLL | Caucasian | TaqMan | PB | 321/470 | 156/143/22 | 279/163/28 | 0.814 |
| Tang | 2019 | China | EGJA | Asian | SNPscan | HB | 1205/1530 | 76/461/668 | 98/586/846 | 0.967 |
| Cao | 2020 | China | ESCC | Asian | SNPscan | HB | 713/1201 | 53/252/408 | 80/464/657 | 0.988 |
| Khadhraoui | 2020 | Tunisia | LC | Mixed | TaqMan | PB | 169/300 | 88/71/10 | 190/94/16 | 0.628 |
| Wang | 2021 | China | LC | Asian | SNPscan | HB | 988/895 | 71/351/566 | 63/361/471 | 0.860 |
The NOS scores of all included studies.
| Author | Year | Cancer-type | Selection | Comparability | Exposure | Score | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| An adequate definition of case | Representativeness of the case | Selection of controls | Definition of controls | Control for an important factor | Assessment of exposure | The same method of ascertainment for cases and controls | Non-response rate | ||||
| –Partyka | 2016 | RCC | ★ | ★ | ★ | ★ | ★ | – | ★ | – | 6 |
| Karabon | 2016 | CLL | ★ | ★ | ★ | ★ | ★ | – | ★ | – | 6 |
| Tang | 2019 | EGJA | ★ | ★ | – | ★ | ★★ | – | ★ | – | 6 |
| Cao | 2020 | ESCC | ★ | ★ | – | ★ | ★★ | – | ★ | – | 6 |
| Khadhraoui | 2020 | LC | ★ | ★ | ★ | ★ | ★★ | – | ★ | – | 7 |
| Wang | 2021 | LC | ★ | ★ | - | ★ | ★★ | – | ★ | – | 6 |
Results of the meta-analysis.
| Studies | N | Dominant model | Recessive model | Heterozygous model | Homozygous model | Additive model | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR |
| OR (95%CI) |
| OR (95%CI) |
| I²(%) | OR (95%CI) |
| OR (95%CI) |
| ||||||
| Total | 6 | 1.21 | .052 | 54.3 | 1.10 | .759 | 0.0 | 1.17 | .015 | 64.4 | 1.09 | .632 | 0.0 |
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| Caucasian | 2 |
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| 1.21 | .831 | 0.0 |
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| 1.52 | .951 | 0.0 |
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| Asian | 3 | 0.97 | .854 | 0.0 | 1.09 | .313 | 13.8 | 0.91 | .669 | 0.0 | 1.01 | .884 | 0.0 | 1.05 | .520 | 0.0 |
| Mixed | 1 | – | 0.0 | 1.12 | – | 0.0 | . | 0.0 | 1.35 | – | 0.0 | – | 0.0 | |||
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| LC | 2 | 1.24 | .067 | 70.2 |
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| 1.18 | .022 | 81.0 | 1.11 | .610 | 0.0 |
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| EN | 2 | 0.96 | .579 | 0.0 | 1.05 | .432 | 0.0 | 0.93 | .402 | 0.0 | 0.98 | .739 | 0.0 | 1.02 | .689 | 0.0 |
| Others | 2 |
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| 1.21 | .831 | 0.0 |
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| 1.52 | .951 | 0.0 |
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| TaqMan | 3 |
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| 1.19 | .962 | 0.0 |
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| SNPscan | 3 | 0.97 | .854 | 0.0 | 1.09 | .313 | 13.8 | 0.91 | .669 | 0.0 | 1.01 | .884 | 0.0 | 1.05 | .520 | 0.0 |
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| PB | 3 |
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| 1.19 | .962 | 0.0 |
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| HB | 3 | 0.97 | .854 | 0.0 | 1.09 | .313 | 13.8 | 0.91 | .669 | 0.0 | 1.01 | .884 | 0.0 | 1.05 | .520 | 0.0 |
Figure 2.Forest plot of the dominant model (AG+GG vs AA).
Figure 6.Forest plot of the additive model (G vs A).
Figure 7.Sensitivity analysis of 5 genetic models. (A) dominant model; (B) recessive model; (C) heterozygous model; (D) homozygous model; (E) additive mode.
Figure 8.Funnel plots of 5 genetic models. (A) dominant model; (B) recessive model; (C) heterozygous model; (D) homozygous model; (E) additive mode. And the P values of Begg’s test are, respectively, PA = .260, PB = 1.000, PC = .260, PD = .260, and PE = .133.