Literature DB >> 35929009

Ordering and Interpreting Precision Oncology Studies for Adults With Advanced Solid Tumors: A Primer.

Bruce Montgomery1,2, Sunny Wang3,4, Matthew Rettig5,6, Benson Lee5, Jill Bates7,8, Colin Pritchard2.   

Abstract

Background: The promise of precision oncology can only be realized when genetic alterations are identified that can be leveraged to improve response and minimize toxicity. Identifying those alterations requires the knowledge to order the right test and to interpret the results correctly. This primer is designed to help clinicians order the appropriate testing for patients with specific malignancies and to give them an informed approach to interpretation. Observations: Germline DNA is usually acquired from peripheral blood, buccal swab, or saliva collection in patients with a metastatic malignancy and can provide treatment options otherwise not available. However, germline testing does not indicate alterations that arise solely in tumor tissue. Somatic testing may be performed on primary tumor, metastatic biopsy, or circulating tumor DNA when the alteration is present at the time that the tumor developed and expected to be carried through the evolution of the tumor. Conclusions: The rapid growth in technology and ability to enhance understanding of relevant tumor biology continues to improve the therapeutic landscape for individuals dealing with malignancy as does our ability to find targetable genetic alterations with the potential for meaningful clinical benefit.
Copyright © 2022 Frontline Medical Communications Inc., Parsippany, NJ, USA.

Entities:  

Year:  2022        PMID: 35929009      PMCID: PMC9346578          DOI: 10.12788/fp.0270

Source DB:  PubMed          Journal:  Fed Pract        ISSN: 1078-4497


  26 in total

Review 1.  Clinical consequences of clonal hematopoiesis of indeterminate potential.

Authors:  David P Steensma
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2018-11-30

2.  Integrating Genetic and Genomic Testing Into Oncology Practice.

Authors:  Susan M Domchek; Elaine Mardis; Jennifer W Carlisle; Taofeek K Owonikoko
Journal:  Am Soc Clin Oncol Educ Book       Date:  2020-05

3.  Genomic Profiling of Advanced Non-Small Cell Lung Cancer in Community Settings: Gaps and Opportunities.

Authors:  Martin E Gutierrez; Kelly Choi; Richard B Lanman; Edward J Licitra; Stanley M Skrzypczak; Ruth Pe Benito; Tommy Wu; Srikesh Arunajadai; Sukhi Kaur; Harry Harper; Andrew L Pecora; Eric V Schultz; Stuart L Goldberg
Journal:  Clin Lung Cancer       Date:  2017-04-13       Impact factor: 4.785

Review 4.  Genomic Analysis in the Age of Human Genome Sequencing.

Authors:  Tuuli Lappalainen; Alexandra J Scott; Margot Brandt; Ira M Hall
Journal:  Cell       Date:  2019-03-21       Impact factor: 41.582

5.  Clinical determinants for successful circulating tumor DNA analysis in prostate cancer.

Authors:  Michael T Schweizer; Roman Gulati; Mallory Beightol; Eric Q Konnick; Heather H Cheng; Nola Klemfuss; Navonil De Sarkar; Evan Y Yu; R Bruce Montgomery; Peter S Nelson; Colin C Pritchard
Journal:  Prostate       Date:  2019-03-13       Impact factor: 4.104

6.  Entrectinib in patients with advanced or metastatic NTRK fusion-positive solid tumours: integrated analysis of three phase 1-2 trials.

Authors:  Robert C Doebele; Alexander Drilon; Luis Paz-Ares; Salvatore Siena; Alice T Shaw; Anna F Farago; Collin M Blakely; Takashi Seto; Byung Chul Cho; Diego Tosi; Benjamin Besse; Sant P Chawla; Lyudmila Bazhenova; John C Krauss; Young Kwang Chae; Minal Barve; Ignacio Garrido-Laguna; Stephen V Liu; Paul Conkling; Thomas John; Marwan Fakih; Darren Sigal; Herbert H Loong; Gary L Buchschacher; Pilar Garrido; Jorge Nieva; Conor Steuer; Tobias R Overbeck; Daniel W Bowles; Elizabeth Fox; Todd Riehl; Edna Chow-Maneval; Brian Simmons; Na Cui; Ann Johnson; Susan Eng; Timothy R Wilson; George D Demetri
Journal:  Lancet Oncol       Date:  2019-12-11       Impact factor: 41.316

7.  Validation and implementation of targeted capture and sequencing for the detection of actionable mutation, copy number variation, and gene rearrangement in clinical cancer specimens.

Authors:  Colin C Pritchard; Stephen J Salipante; Karen Koehler; Christina Smith; Sheena Scroggins; Brent Wood; David Wu; Ming K Lee; Suzanne Dintzis; Andrew Adey; Yajuan Liu; Keith D Eaton; Renato Martins; Kari Stricker; Kim A Margolin; Noah Hoffman; Jane E Churpek; Jonathan F Tait; Mary-Claire King; Tom Walsh
Journal:  J Mol Diagn       Date:  2013-11-02       Impact factor: 5.568

8.  Tumour lineage shapes BRCA-mediated phenotypes.

Authors:  Philip Jonsson; Chaitanya Bandlamudi; Michael L Cheng; Preethi Srinivasan; Shweta S Chavan; Noah D Friedman; Ezra Y Rosen; Allison L Richards; Nancy Bouvier; S Duygu Selcuklu; Craig M Bielski; Wassim Abida; Diana Mandelker; Ozge Birsoy; Liying Zhang; Ahmet Zehir; Mark T A Donoghue; José Baselga; Kenneth Offit; Howard I Scher; Eileen M O'Reilly; Zsofia K Stadler; Nikolaus Schultz; Nicholas D Socci; Agnes Viale; Marc Ladanyi; Mark E Robson; David M Hyman; Michael F Berger; David B Solit; Barry S Taylor
Journal:  Nature       Date:  2019-07-10       Impact factor: 49.962

9.  Integrative clinical genomics of advanced prostate cancer.

Authors:  Dan Robinson; Eliezer M Van Allen; Yi-Mi Wu; Nikolaus Schultz; Robert J Lonigro; Juan-Miguel Mosquera; Bruce Montgomery; Mary-Ellen Taplin; Colin C Pritchard; Gerhardt Attard; Himisha Beltran; Wassim Abida; Robert K Bradley; Jake Vinson; Xuhong Cao; Pankaj Vats; Lakshmi P Kunju; Maha Hussain; Felix Y Feng; Scott A Tomlins; Kathleen A Cooney; David C Smith; Christine Brennan; Javed Siddiqui; Rohit Mehra; Yu Chen; Dana E Rathkopf; Michael J Morris; Stephen B Solomon; Jeremy C Durack; Victor E Reuter; Anuradha Gopalan; Jianjiong Gao; Massimo Loda; Rosina T Lis; Michaela Bowden; Stephen P Balk; Glenn Gaviola; Carrie Sougnez; Manaswi Gupta; Evan Y Yu; Elahe A Mostaghel; Heather H Cheng; Hyojeong Mulcahy; Lawrence D True; Stephen R Plymate; Heidi Dvinge; Roberta Ferraldeschi; Penny Flohr; Susana Miranda; Zafeiris Zafeiriou; Nina Tunariu; Joaquin Mateo; Raquel Perez-Lopez; Francesca Demichelis; Brian D Robinson; Marc Schiffman; David M Nanus; Scott T Tagawa; Alexandros Sigaras; Kenneth W Eng; Olivier Elemento; Andrea Sboner; Elisabeth I Heath; Howard I Scher; Kenneth J Pienta; Philip Kantoff; Johann S de Bono; Mark A Rubin; Peter S Nelson; Levi A Garraway; Charles L Sawyers; Arul M Chinnaiyan
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

10.  Implications of Incidental Germline Findings Identified In the Context of Clinical Whole Exome Sequencing for Guiding Cancer Therapy.

Authors:  Bryan P Schneider; Leigh Anne Stout; Santosh Philips; Courtney Schroeder; Susanna F Scott; Cynthia Hunter; Nawal Kassem; Patrick J Kiel; Milan Radovich
Journal:  JCO Precis Oncol       Date:  2020-11
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