| Literature DB >> 35923761 |
Raghda Abdellatif Hafez1, Manar E Hassan2, Maha G Haggag2, Nora Atef3, Alshimaa L Abdallah1, Marian A Gerges1.
Abstract
Background: Single nucleotide polymorphisms (SNPs) in the interleukin 13 (IL13) gene are associated with vulnerability to allergic diseases, such as asthma and allergic conjunctivitis (AC). Periostin, as an IL13-induced protein, has emerged as a novel biomarker in several allergic diseases. Data among Egyptian patients are still scarce. Aim: To find out the association of IL13 rs20541 gene polymorphism and serum levels of periostin with asthma and AC among Egyptian patients. Patients andEntities:
Keywords: IL13 rs2054; allergic asthma; allergic conjunctivitis; periostin
Year: 2022 PMID: 35923761 PMCID: PMC9342469 DOI: 10.2147/JAA.S373098
Source DB: PubMed Journal: J Asthma Allergy ISSN: 1178-6965
Socio-Demographics of Allergic Patients and Controls
| Cases | Controls | Test | P | OR (95% CI) | ||||
|---|---|---|---|---|---|---|---|---|
| n=81 | % | n=27 | % | |||||
| 33.19±10.20 | 31.33±8.51 | 0.714* | 0.477 | – | ||||
| Male | 38.00 | 46.9 | 13.00 | 48.1 | 0.012 | 0.911 | 1.00 | |
| Female | 43.00 | 53.1 | 14.00 | 51.9 | 0.95 (0.398–2.276) | |||
| Urban | 54.00 | 66.7 | 12.00 | 44.4 | 4.208** | 0.04^ | 2.50 (1.028–6.079) | |
| Rural | 27.00 | 33.3 | 15.00 | 55.6 | 1.00 | |||
| Negative | 28.00 | 34.6 | 19.00 | 70.4 | 10.56** | 0.001^ | 1.00 | |
| Positive | 53.00 | 65.4 | 8.00 | 29.6 | 4.5 (1.75–11.90) | |||
Notes: *Independent sample t-test; **Chi square test; ^, significant.
Abbreviations: SD, standard deviation; OR, odds ratio; CI, confidence interval.
Characteristics of Different Groups of Allergic Patients and Controls
| Allergic Conjunctivitis | Asthma | Allergic Conjunctivitis & Asthma | Control | Test | P | ||
|---|---|---|---|---|---|---|---|
| n=27 (%) | n =27 (%) | n=27 (%) | n =27 (%) | ||||
| 26.02±11.89 | 39.30±15.06 | 34.26±12.43 | 31.33±8.50 | 3.33*** | 0.02^ | ||
| 13.00 (48.1) | 11.00 (40.7) | 14.00 (51.9) | 13.00 (48.1) | 0.706* | 0.904 | ||
| 14.00 (51.9) | 16.00 (59.3) | 13.00 (48.1) | 14.00 (51.9) | ||||
| 15.00 (55.6) | 22.00 (81.5) | 17.00 (63.0) | 12.00 (44.4) | 8.260* | 0.044^ | ||
| 12.00 (44.4) | 5.00 (18.5) | 10.00 (37.0) | 15.00 (55.6) | ||||
| 11.00 (40.7) | 10.00 (37.0) | 7.00 (25.9) | 19.00 (70.4) | 11.866* | 0.008^ | ||
| 16.00 (59.3) | 17.00 (63.0) | 20.00 (74.1) | 8.00 (29.6) | ||||
| 20.00 (74.1) | 19.00 (70.4) | 18.00 (66.7) | 19.00 (70.4) | 0.355* | 0.991 | ||
| 7.00 (25.9) | 8.00 (29.6) | 9.00 (33.3) | 9.00 (29.6) | ||||
| 5.00 (2.00–20.0) | 8.00 (1.00–50.0) | 5.00 (1.00–35.0) | NA | 3.091** | 0.213 | ||
| 8.59±2.29 | 9.04±2.85 | 9.15±3.05 | NA | 0.309*** | 0.735 | ||
| 137.54±89.02 | 192.85±24.91 | 221.72±99.26 | 28.78±19.04 | 5.684*** | 0.001^ | ||
| 310 (200–670) | 340 (200–960) | 330 (200–690) | NA | 1.925** | 0.382 | ||
Notes: Comparison between individual groups was done using the Analysis of Variance (ANOVA test). *Chi-square test; **Kruskal Wallis test; ***ANOVA test; ^, significant.
Abbreviations: SD, standard deviation; N A, non-applicable.
Allelic and Genotypic Frequency for IL13 rs20541 Gene Polymorphism Among Different Patient Groups and Controls
| Allergic Conjunctivitis | Asthma | Allergic Conjunctivitis & Asthma | Control | P | |||
|---|---|---|---|---|---|---|---|
| n=27 (%) | n=27 (%) | n=27 (%) | n=27 (%) | ||||
| GG | 19 (70.4) | 14 (51.9) | 19 (70.4) | 15 (55.6) | 7.053 | 0.287 | |
| AG | 8 (29.6) | 9 (33.3) | 6 (22.2) | 12 (44.4) | |||
| AA | 0 (0.0) | 4 (14.8) | 2 (7.4) | 1 (3.7) | |||
| A | 8 (14.8) | 17 (31.5) | 10 (18.5) | 13 (24.1) | 4.929 | 0.177 | |
| G | 46 (85.2) | 37 (68.5) | 44 (81.5) | 41 (75.9) | |||
| GG | 19 (70.4) | 11 (40.7) | 19 (70.4) | 15 (55.6) | 6.750 | 0.083 | |
| AA+AG | 8 (29.6) | 16 (59.3) | 8 (29.6) | 12 (44.4) | |||
Note: *Chi-square test.
Abbreviations: A, adenine; G, guanosine.
Figure 1Allelic discrimination plot showing the results of IL13 rs20541 SNP genotyping by real-time PCR in 48 examined allergic patients. Blue dots correspond to the homozygous GG genotype (28 patients), green dots correspond to the heterozygous AG genotypes (17 patients), and red dots correspond to the homozygous AA genotype (3 patients). The X-axis represents the fluorescence of allele A while the Y-axis represents that of allele G. Different colors correspond to different fluorescent dyes used in the reaction; FAM (blue), ROX (red), and VIC (green).
Serum Levels of Periostin and IL13 Among Different Groups of Patients and Control
| Allergic Conjunctivitis (n=27) | Asthma (n=27) | Allergic Conjunctivitis & Asthma (n=27) | Control (n=27) | Test | P | |
|---|---|---|---|---|---|---|
| Mean ± SD | Mean ± SD | Mean ± SD | Mean ± SD | |||
| 22.88±10.01 | 26.05±10.71 | 22.23±10.82 | 17.51±3.17 | 3.919 | 0.011^ | |
| 19.56±13.65 | 16.04±9.91 | 22.79±13.49 | 8.83±1.84 | 8.240 | <0.001^^ |
Notes: ^, significant; ^^, highly significant. All data are expressed as mean ±SD. Comparison between individual groups was done using Analysis of Variance (ANOVA test).
Abbreviation: SD, standard deviation.
Relation Between Serum Periostin, Serum IL13, and IL13 rs20541 Alleles and Genotypes Among Allergic Patients (n = 81)
| Variables | Mean ± SD | Test | P | ||
|---|---|---|---|---|---|
| Genotype | GG | 21.07±9.34 | 3.671** | 0.160 | |
| AG | 24.41±10.39 | ||||
| AA | 20.79±6.93 | ||||
| Dominant | GG | 20.79±8.90 | −2.398* | 0.016^ | |
| AA+AG | 24.48±10.24 | ||||
| Allele | A | 22.93±9.22 | −0.554* | 0.580 | |
| G | 21.94±9.72 | ||||
| Genotype | GG | 16.56±6.20 | 1.175** | 0.556 | |
| AG | 16.19±10.94 | ||||
| AA | 22.19±11.68 | ||||
| Dominant | GG | 16.83±12.39 | −0.038* | 0.970 | |
| AA+AG | 16.78±11.27 | ||||
| Allele | A | 15.96±10.75 | −1.016* | 0.309 | |
| G | 17.05±10.15 | ||||
Notes: *Mann Whitney test; **Kruskal–Wallis test; ^, significant.
Abbreviations: SD, standard deviation; A, adenine; G, guanosine.
Figure 2A scattered plot curve shows a significant positive correlation (r=0.352, p<0.001) between serum level of periostin and serum level of IL13 among the examined allergic patients (n=81).