Literature DB >> 35920817

Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems.

Daniel J Richter1,2, Romain Watteaux3,4, Thomas Vannier5,6,7, Jade Leconte5,6, Paul Frémont5,6, Gabriel Reygondeau8,9, Nicolas Maillet10, Nicolas Henry1,6, Gaëtan Benoit11, Ophélie Da Silva6,12, Tom O Delmont5,6, Antonio Fernàndez-Guerra13,14,15, Samir Suweis16, Romain Narci17, Cédric Berney1,6, Damien Eveillard6,18, Frederick Gavory5, Lionel Guidi6,12, Karine Labadie19, Eric Mahieu19, Julie Poulain5,6, Sarah Romac1,6, Simon Roux20, Céline Dimier1,21, Stefanie Kandels22,23, Marc Picheral6,12, Sarah Searson6,12, Stéphane Pesant14,24, Jean-Marc Aury5, Jennifer R Brum20,25, Claire Lemaitre11, Eric Pelletier5,6, Peer Bork22,26,27, Shinichi Sunagawa22,28, Fabien Lombard6,12,29, Lee Karp-Boss30, Chris Bowler6,21,21, Matthew B Sullivan20,31,32,33, Eric Karsenti6,21,23, Mahendra Mariadassou17, Ian Probert1,6, Pierre Peterlongo11, Patrick Wincker5,6, Colomban de Vargas1,6, Maurizio Ribera d'Alcalà3, Daniele Iudicone3, Olivier Jaillon5,6.   

Abstract

Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton geography and its relation to the biological, chemical, and physical context of the ocean (the 'seascape') by analyzing metagenomes of plankton communities sampled across oceans during the Tara Oceans expedition, in light of environmental data and ocean current transport. Using a consistent approach across organismal sizes that provides unprecedented resolution to measure changes in genomic composition between communities, we report a pan-ocean, size-dependent plankton biogeography overlying regional heterogeneity. We found robust evidence for a basin-scale impact of transport by ocean currents on plankton biogeography, and on a characteristic timescale of community dynamics going beyond simple seasonality or life history transitions of plankton.
© 2022, Richter, Watteaux, Vannier et al.

Entities:  

Keywords:  ecology; genetics; genomics; metabarcoding; metagenomics; microbial oceanography; plankton biogeography

Mesh:

Year:  2022        PMID: 35920817      PMCID: PMC9348854          DOI: 10.7554/eLife.78129

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.713


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