| Literature DB >> 35919232 |
Beatriz de Jesus Brait1,2, Simone Perpétua da Silva Lima1, Franciana Luísa Aguiar1, Rafael Fernandes-Ferreira3,4, Camila Ive Ferreira Oliveira-Brancati1, Joyce Aparecida Martins Lopes Ferraz1, Graciele Domitila Tenani1, Marcela Augusta de Souza Pinhel1, Leticia Carolina Paraboli Assoni1, Augusto Haniu Nakahara1, Natalia Dos Santos Jábali1, Octavio Pennella Fenelon Costa1, Maria Eduarda Lopes Baitello1, Sidney Pinheiro Júnior1, Renato Ferreira Silva1, Rita de Cássia Martins Alves Silva1, Doroteia Rossi da Silva Souza1.
Abstract
Objective: To evaluate the association of genetic polymorphisms of vitamin D transporter protein (DBPrs4588 and DBP-rs7041) and cytochrome P450-24A1 (CYP24A1-rs6013897) in patients with cirrhosis with or without hepatocellular carcinoma (HCC), including demographic/clinical/biochemical profiles.Entities:
Keywords: liver; neoplasia; single nucleotide polymorphism; vitamin D
Year: 2022 PMID: 35919232 PMCID: PMC9300397 DOI: 10.3332/ecancer.2022.1383
Source DB: PubMed Journal: Ecancermedicalscience ISSN: 1754-6605
Demographic profile, lifestyle and comorbidities in the TotalG of patients, patients with cirrhosis and HCC (G1), with isolated cirrhosis (G2) and individuals without the disease (G3).
| Characteristic | TotalG ( | G1 ( | G2 ( | G3 ( | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TotalG × G3 | G1 × G2 | G1 × G3 | G2 × G3 | |||||||||
| Sex |
| % |
| % |
| % |
| % | ||||
| Male | 124 | 78.5 | 50 | 83.3 | 74 | 75.5 | 127 | 56.4 |
|
|
| 0.3361 |
| Female | 34 | 21.5 | 10 | 16.7 | 24 | 24.5 | 98 | 43.6 | ||||
| Lifestyle |
| % |
| % |
| % |
| % | ||||
| Tobacco | 74 | 46.8 | 27 | 45.0 | 47 | 48.0 | 45 | 20.0 |
| 0.8434 |
|
|
| Alcohol | 98 | 62.0 | 39 | 65.0 | 59 | 60.2 | 26 | 11.6 |
| 0.6643 |
|
|
| Comorbidity |
| % |
| % |
| % |
| % | ||||
| DM | 41 | 26.0 | 16 | 26.7 | 25 | 25.5 | 8 | 3.6 |
| 0.8721 |
|
|
| SAH | 53 | 33.5 | 18 | 30.0 | 35 | 35.7 | 70 | 31.1 | 0.6959 | 0.5723 | 0.9934 | 0.4947 |
p = Significance level
Chi-square or Fisher test; significance level = p < 0.05
N = Number of individuals; DM = Diabetes mellitus; SAH = Systemic arterial hypertension
Allelic and genotypic frequencies for the DBP (rs4588 and rs7041) and CYP24A1 (rs6013897) polymorphisms in the TotalG of patients, patients with cirrhosis and HCC (G1), patients with isolated cirrhosis (G2) and individuals without the disease (G3).
| Genetic profile | TotalG | G1 | G2 | G3 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TotalG × G3 | G1 × G2 | G1 × G3 | G2 × G3 | |||||||||
| DBP (rs4588) |
| % |
| % |
| % |
| % | ||||
| C/C | 76 | 48.1 | 27 | 45.0 | 49 | 50.0 | 119 | 52.9 | 0.4129 | 0.6553 | 0.3468 | 0.7214 |
| C/A | 68 | 43.0 | 25 | 41.7 | 43 | 43.9 | 86 | 38.2 | 0.4007 | 0.9149 | 0.7360 | 0.4063 |
| A/A | 14 | 8.9 | 8 | 13.3 | 6 | 6.1 | 20 | 8.9 | 0.9924 | 0.2078 | 0.4333 | 0.5368 |
| _/A | 82 | 51.9 | 33 | 55.0 | 49 | 50.0 | 106 | 47.1 | 0.4129 | 0.6553 | 0.3468 | 0.7214 |
| Allele |
| AF |
| AF |
| AF |
| AF | ||||
| C | 220 | 0.70 | 79 | 0.65 | 141 | 0.72 | 324 | 0.72 | 0.5262 | 0.3081 | 0.2278 | 0.9873 |
| A | 96 | 0.30 | 41 | 0.35 | 55 | 0.28 | 126 | 0.28 | ||||
| DBP (rs7041) |
| % |
| % |
| % |
| % | ||||
| T/T | 52 | 32.9 | 19 | 31.7 | 33 | 33.7 | 57 | 25.3 | 0.1328 | 0.9314 | 0.4114 | 0.1609 |
| T/G | 67 | 42.4 | 29 | 48.3 | 38 | 38.8 | 105 | 46.7 | 0.4708 | 0.3106 | 0.9328 | 0.2337 |
| G/G | 39 | 24.7 | 12 | 20.0 | 27 | 27.6 | 63 | 28.0 | 0.5449 | 0.3798 | 0.2777 | 0.9341 |
| _/G | 106 | 67.1 | 41 | 68.3 | 65 | 66.3 | 168 | 74.7 | 0.1328 | 0.9314 | 0.4114 | 0.1609 |
| Allele |
| AF |
| AF |
| AF |
| AF | ||||
| T | 171 | 0.54 | 67 | 0.56 | 104 | 0.53 | 219 | 0.49 | 0.1582 | 0.7161 | 0.1962 | 0.3465 |
| G | 145 | 0.46 | 53 | 0.44 | 92 | 0.47 | 231 | 0.51 | ||||
| CYP24A1 (rs6013897) |
| % |
| % |
| % |
| % | ||||
| A/A | 12 | 7.6 | 1 | 1.7 | 11 | 11.2 | 17 | 7.6 | 0.9886 |
| 0.1347 | 0.3885 |
| A/T | 65 | 41.1 | 28 | 46.7 | 37 | 37.7 | 79 | 35.1 | 0.2749 | 0.3481 | 0.1356 | 0.7420 |
| T/T | 81 | 51.3 | 31 | 51.7 | 50 | 51.0 | 129 | 57.3 | 0.2845 | 0.9371 | 0.5225 | 0.3536 |
| _/T | 146 | 92.4 | 59 | 98.3 | 87 | 88.8 | 208 | 92.6 | 0.9886 |
| 0.1347 | 0.3885 |
| Allele |
| AF | AF |
| AF |
| AF | |||||
| A | 89 | 0.28 | 30 | 0.25 | 59 | 0.30 | 113 | 0.25 | 0.3893 | 0.3955 | 0.9801 | 0.2215 |
| T | 227 | 0.72 | 90 | 0.75 | 137 | 0.70 | 337 | 0.75 | ||||
DBP = Vitamin D-binding protein; CYP24A1 = Cytochrome P450 family 24 subfamily A member 1; A/A = Wild homozygous genotype; A/T = Heterozygous genotype; T/T = mutant homozygous genotype; N = Number of individuals; AF = Absolute frequency
p = Significance level; significance level = p < 0.05
Chi-Square or Fisher’s test
Risk profile by logistic regression analysis in a TotalG of patients (TotalG = cirrhosis with or without HCC), with cirrhosis and HCC (G1), with isolated cirrhosis (G2) and subgroups with vitamin dosage D (TGd, G1d and G2d), compared to individuals without liver disease.
| TotalG | G1 | G2 | G1 × G2 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Covariates | ratio | Confidence interval | Odds ratio | Confidence interval | Odds ratio | Confidence interval | Odds ratio | Confidence interval | ||||
| Tobacco | 2.05 | 1.16–3.63 | 0.0129 | - | - |
| 2.50 | 1.34–4.65 | 0.004 | - | - | - |
| Alcohol | 12.68 | 7.13–22.56 | <0.0001 | 24.36 | 10.25–57.91 | <0.0001 | 10.51 | 5.65–19.57 | <0.0001 | - | - | - |
| DM | 11.11 | 4.58–26.97 | <0.0001 | 15.27 | 4.53–51.47 | <0.0001 | 10.04 | 3.85–26.17 | <0.0001 | - | - | - |
| SAH | - | - | - | - | - | - | - | - | - | - | - | - |
| Age | 1.03 | 1.01–1.05 | 0.0031 | 1.08 | 1.04–1.12 | <0.0001 | - | - | - | 1.08 | 1.03–1.13 | 0.0005 |
| Male | - | - |
| - | - |
| - | - | - | 3.36 | 1.17–9.59 | 0.0237 |
| - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - |
| - | - | - | - | - |
| - | - | - | |
| - | - | - | - | - | - | - | - | - | 14.18 | 1.50–133.71 | 0.0205 | |
| Viral Hepatitis | - | - | - | - | - | - | - | - | - | 3.09 | 1.22–7.81 | 0.0169 |
| GGT | - | - | - | - | - | - | - | - | - | 3.85 | 1.40–10.58 | 0.009 |
| AFP | - | - | - | - | - | - | - | - | - | 5.46 | 2.32–12.88 | 0.0001 |
| Creatinine | - | - | - | - | - | - | - | - | - | 3.58 | 1.41–9.07 | 0.0071 |
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| Tobacco | - | - |
| 14.50 | 1.10–189.46 | 0.0414 | - | - |
| - | - | - |
| Alcohol | 21.68 | 2.56–183.21 | 0.0047 | 12.10 | 1.09–1.10 | 0.0421 | - | - |
| - | - | - |
Significance level = p < 0.05
DM = Diabetes mellitus; SAH = Systemic arterial hypertension; DBp = Vitamin D-binding protein; CYP24A1 = Cytochrome P450 family 24subfamily A member 1; GGT = gamma-glutamyl transferase, AFP = alpha-fetoprotein, d = subgroup with vitamin D dosage
Figure 1.Kaplan–Meier actuarial curve for patients with cirrhosis with or without death event-free HCC, considering the DBP-rs7041 polymorphism. (a) TotalG of patients (with and without transplant); (b) patients without transplantation; and (c) transplant patients; carriers of genotypes with at least one polymorphic allele (_/G) compared to the wild homozygous genotype (T/T). DBP = Vitamin D-binding protein.
Figure 2.Kaplan–Meier actuarial curve for patients with cirrhosis with or without death event-free HCC, considering the DBP-rs4588 polymorphism. (a) TotalG of patients (with and without transplant); (b) patients without transplantation; and (c) transplant patients; carriers of genotypes with at least one polymorphic allele (_/A) compared to wild homozygous genotype (C/C). DBP = Vitamin D-binding protein.
Figure 3.Kaplan–Meier actuarial curve for patients with cirrhosis with or without death event-free HCC, considering the CYP24A1-rs6013897 polymorphism. (a) TotalG of patients (with and without transplant); (b) patients without transplantation; and (c) transplant patients; carriers of genotypes with at least one polymorphic allele (_/T) compared to the wild homozygous genotype (A/A). CYP24A1= Cytochrome P450 family 24 subfamily A member.