Literature DB >> 35918898

Aligned peptoid-based macrodiscs for structural studies of membrane proteins by oriented-sample NMR.

Azamat R Galiakhmetov1, Carolynn M Davern1, Richard J A Esteves1, Emmanuel O Awosanya1, Quibria A E Guthrie1, Caroline Proulx1, Alexander A Nevzorov2.   

Abstract

Development of a robust, uniform, and magnetically orientable lipid mimetic will undoubtedly advance solid-state NMR of macroscopically aligned membrane proteins. Here, we report on a novel lipid membrane mimetic based on peptoid belts. The peptoids, composed of 15 residues, were synthesized by alternating N-(2-phenethyl)glycine with N-(2-carboxyethyl)glycine residues at a 2:1 molar ratio. The chemically synthesized peptoids possess a much lower degree of polydispersity versus styrene-maleic acid polymers, thus yielding uniform discs. Moreover, the peptoid oligomers are more flexible and do not require a specific folding, unlike lipoproteins, in order to wrap around the hydrophobic membrane core. The NMR spectra measured for the membrane-bound form of Pf1 coat protein incorporated in this new lipid mimetics demonstrate a higher order parameter and uniform linewidths compared with the conventional bicelles and peptide-based macrodiscs. Importantly, unlike bicelles, the peptoid-based macrodiscs are detergent free.
Copyright © 2022 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2022        PMID: 35918898      PMCID: PMC9463639          DOI: 10.1016/j.bpj.2022.07.024

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   3.699


  37 in total

1.  Computer-generated pulse sequences for 1H-15N and 1Hα-13Cα separated local-field experiments.

Authors:  Joel Lapin; Alexander A Nevzorov
Journal:  J Magn Reson       Date:  2020-07-17       Impact factor: 2.229

2.  High-resolution NMR spectroscopy of membrane proteins in aligned bicelles.

Authors:  Anna A De Angelis; Alexander A Nevzorov; Sang Ho Park; Stanley C Howell; Anthony A Mrse; Stanley J Opella
Journal:  J Am Chem Soc       Date:  2004-12-01       Impact factor: 15.419

3.  Magnetically aligned phospholipid bilayers with positive ordering: a new model membrane system.

Authors:  R S Prosser; J S Hwang; R R Vold
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

Review 4.  Advances in Development of Antimicrobial Peptidomimetics as Potential Drugs.

Authors:  Natalia Molchanova; Paul R Hansen; Henrik Franzyk
Journal:  Molecules       Date:  2017-08-29       Impact factor: 4.411

5.  Magnetically orientable phospholipid bilayers containing small amounts of a bile salt analogue, CHAPSO.

Authors:  C R Sanders; J H Prestegard
Journal:  Biophys J       Date:  1990-08       Impact factor: 4.033

6.  Structure of the coat protein in Pf1 bacteriophage determined by solid-state NMR spectroscopy.

Authors:  David S Thiriot; Alexander A Nevzorov; Lena Zagyanskiy; Chin H Wu; Stanley J Opella
Journal:  J Mol Biol       Date:  2004-08-13       Impact factor: 5.469

Review 7.  Structure-function relationships in peptoids: recent advances toward deciphering the structural requirements for biological function.

Authors:  Sarah A Fowler; Helen E Blackwell
Journal:  Org Biomol Chem       Date:  2009-02-11       Impact factor: 3.876

8.  Ligand-induced conformational changes of the multidrug resistance transporter EmrE probed by oriented solid-state NMR spectroscopy.

Authors:  Anindita Gayen; James R Banigan; Nathaniel J Traaseth
Journal:  Angew Chem Int Ed Engl       Date:  2013-08-12       Impact factor: 15.336

9.  Peptoid polymers: a highly designable bioinspired material.

Authors:  Jing Sun; Ronald N Zuckermann
Journal:  ACS Nano       Date:  2013-05-30       Impact factor: 15.881

10.  Structural and spectroscopic studies of peptoid oligomers with alpha-chiral aliphatic side chains.

Authors:  Cindy W Wu; Kent Kirshenbaum; Tracy J Sanborn; James A Patch; Kai Huang; Ken A Dill; Ronald N Zuckermann; Annelise E Barron
Journal:  J Am Chem Soc       Date:  2003-11-05       Impact factor: 15.419

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