Literature DB >> 35915362

SSR marker-based genetic characterization of Turkish oriental tobaccos.

Ibrahim Saygili1, Nejdet Kandemir2, Ahmet Kinay3, Selim Aytac4, Ali Kemal Ayan4.   

Abstract

BACKGROUND: Turkey is one of the traditional oriental tobacco producing countries. Oriental tobaccos produced in Turkey are ecotypes specific to certain regions, local varieties and landraces, and they have unique characteristics. The present study was conducted to reveal the general and interregional genetic diversity levels of tobacco genotypes collected from different regions of Turkey based on DNA markers. METHODS AND
RESULTS: A total of 319 ecotypes/lines of Turkish Oriental Tobaccos collected from different regions (Aegean Region, Marmara Region, Karadeniz Region, and East and Southeast Anatolia Regions) of Turkey and cultivars Xanthi 81, Xanthi 2A, Canik Sitmasuyu, Katerini, Canik 190-5 and NC 55 were subjected to SSR marker analysis. Eighty-nine alleles were obtained from 21 markers examined, and the average number of alleles per marker was 4.05. A total of 314 unique tobacco genotypes were found among 319 plants evaluated using 19 polymorphic SSR markers. In the dendrogram constructed using SSR marker data, genotypes were divided into six clades based on geographic regions and levels of genetic diversity.
CONCLUSIONS: The presence of 314 unique genotypes among 319 tobacco plants evaluated indicated the high level of genetic diversity among Turkish tobaccos. While some of them were N. rustica tobaccos, some others were reminiscent of semi-oriental tobaccos. These genotypes merit further agronomic and technological characterizations, which could allow their utilization in future tobacco breeding.
© 2022. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  Genetic diversity; Microsatellites; Nicotiana tabacum; Polymorphism

Year:  2022        PMID: 35915362     DOI: 10.1007/s11033-022-07815-1

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.742


  5 in total

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Authors:  Gregor Bindler; Rutger van der Hoeven; Irfan Gunduz; Jörg Plieske; Martin Ganal; Luca Rossi; Ferruccio Gadani; Paolo Donini
Journal:  Theor Appl Genet       Date:  2006-11-07       Impact factor: 5.699

2.  First record of Ixodes arboricola (Ixodida: Ixodidae) from Turkey with presence of Candidatus Rickettsia vini (Rickettsiales: Rickettsiaceae).

Authors:  Adem Keskin; Tugba Kul Koprulu; Ahmet Bursali; Arif Cemal Ozsemir; Kiraz Erciyas Yavuz; Saban Tekin
Journal:  J Med Entomol       Date:  2014-07       Impact factor: 2.278

Review 3.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

4.  A high density genetic map of tobacco (Nicotiana tabacum L.) obtained from large scale microsatellite marker development.

Authors:  Gregor Bindler; Jörg Plieske; Nicolas Bakaher; Irfan Gunduz; Nikolai Ivanov; Rutger Van der Hoeven; Martin Ganal; Paolo Donini
Journal:  Theor Appl Genet       Date:  2011-04-02       Impact factor: 5.699

5.  Molecular diversity, population structure, and linkage disequilibrium in a worldwide collection of tobacco (Nicotiana tabacum L.) germplasm.

Authors:  Agostino Fricano; Nicolas Bakaher; Marcello Del Corvo; Pietro Piffanelli; Paolo Donini; Alessandra Stella; Nikolai V Ivanov; Carlo Pozzi
Journal:  BMC Genet       Date:  2012-03-21       Impact factor: 2.797

  5 in total

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